| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800399
Identifier: 114800399
GI number: 114800399
Start: 2321028
End: 2321780
Strand: Direct
Name: 114800399
Synonym: HNE_2220
Alternate gene names: NA
Gene position: 2321028-2321780 (Clockwise)
Preceding gene: 114799609
Following gene: 114799244
Centisome position: 62.65
GC content: 60.42
Gene sequence:
>753_bases ATGCCCCCCAACTCCTCTGCCCCCCCGCCGCGCCAACCTGCTGCCCTCTGGGCGTATGATCAGCTTTTGGATGAACTGGT TGCAGCCAATCGCATTCTGCTTCATCACCAGATTGTGGACTCGTTTGGTCATGTCAGCGCGCGCCATCCGGACCGTCCCG ATCGCTTCCTGATGTCGGGACGCAAGGCCCCCAGCCTCGTCGAACGCGCAGACATCCGCGAGTTTGGCCTCGATGGGGAA CTCGCGGTTCCGGACGGCACCCCCAGCTTCCTGGAACGCTACATTCACAGCGCCATTTATACGGCACGCCCGGATGTCCA GAGCGTCGTACACAGTCATTCTCCGGGCATAATTGCCTTCGGCGTCGTGCCGGAGACGCCGCTCCGCCCGATCTGCCACA CCTGCGGCTTTCTGGGTGGCGGCGCGCCGGTCTTCGAAATCCGGGATGAGCTTGGCCCAGCCTCCAATCTTATGATTACA AATCAGACTCTGGGCCTGGCGCTGGCAAAAAAATTGGGAAGTGCCAGCTATGTCCTCATGCGCGGACATGGGTCCACTGC GGTCGGCCGCAATCTTCCCGAATCTGTCTACAATGCGATCTATGCAGAAACCAATGCACGCATACAGACGACCGCCATGA CGATGGGGCCAGTCACCTTTCTCTCCCCGGAAGAGGCCGCCGCCACCTCGGGCGGTGGCCCTATTGTCGTTGAACGCACC TGGAACCACTGGAAATCAGAGATTGCGTCCTGA
Upstream 100 bases:
>100_bases CCGTCGCACCTTCACCCTGACCGCCGCCCTGAGCCCTCTGGCAGGCTGCGCCGCCTCGCCAGTGTCCCAAACAGTCCTCC GCGCAAATCCGGAAACAGAC
Downstream 100 bases:
>100_bases ATCACGGCCTGCGTTTCAACGCAATGTCACACCTGTGAGGTTTTCGGATACCTCCCAAAGCCTTGCAGAAAGGGCTGCGT CCAGGGCCTGCGGGGGAATT
Product: class II aldolase/adducin domain-containing protein
Products: NA
Alternate protein names: Class II Aldolase; Class II Aldolase/Adducin-Like; Aldolase Domain-Containing Protein; Class II Aldolase/Adducin Domain-Containing Protein; Class II Aldolase/Adducin-Like Protein; Aldolase; Adducin; L-Fuculose Phosphate Aldolase; Decarboxylase Protein; Ribulose-5-Phosphate 4-Epimerase
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MPPNSSAPPPRQPAALWAYDQLLDELVAANRILLHHQIVDSFGHVSARHPDRPDRFLMSGRKAPSLVERADIREFGLDGE LAVPDGTPSFLERYIHSAIYTARPDVQSVVHSHSPGIIAFGVVPETPLRPICHTCGFLGGGAPVFEIRDELGPASNLMIT NQTLGLALAKKLGSASYVLMRGHGSTAVGRNLPESVYNAIYAETNARIQTTAMTMGPVTFLSPEEAAATSGGGPIVVERT WNHWKSEIAS
Sequences:
>Translated_250_residues MPPNSSAPPPRQPAALWAYDQLLDELVAANRILLHHQIVDSFGHVSARHPDRPDRFLMSGRKAPSLVERADIREFGLDGE LAVPDGTPSFLERYIHSAIYTARPDVQSVVHSHSPGIIAFGVVPETPLRPICHTCGFLGGGAPVFEIRDELGPASNLMIT NQTLGLALAKKLGSASYVLMRGHGSTAVGRNLPESVYNAIYAETNARIQTTAMTMGPVTFLSPEEAAATSGGGPIVVERT WNHWKSEIAS >Mature_249_residues PPNSSAPPPRQPAALWAYDQLLDELVAANRILLHHQIVDSFGHVSARHPDRPDRFLMSGRKAPSLVERADIREFGLDGEL AVPDGTPSFLERYIHSAIYTARPDVQSVVHSHSPGIIAFGVVPETPLRPICHTCGFLGGGAPVFEIRDELGPASNLMITN QTLGLALAKKLGSASYVLMRGHGSTAVGRNLPESVYNAIYAETNARIQTTAMTMGPVTFLSPEEAAATSGGGPIVVERTW NHWKSEIAS
Specific function: Unknown
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26920; Mature: 26789
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPNSSAPPPRQPAALWAYDQLLDELVAANRILLHHQIVDSFGHVSARHPDRPDRFLMSG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC RKAPSLVERADIREFGLDGELAVPDGTPSFLERYIHSAIYTARPDVQSVVHSHSPGIIAF CCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEE GVVPETPLRPICHTCGFLGGGAPVFEIRDELGPASNLMITNQTLGLALAKKLGSASYVLM ECCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHHHCCCCEEEEE RGHGSTAVGRNLPESVYNAIYAETNARIQTTAMTMGPVTFLSPEEAAATSGGGPIVVERT ECCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCEEEECCHHHHHCCCCCCEEEECC WNHWKSEIAS HHHHHHHHCC >Mature Secondary Structure PPNSSAPPPRQPAALWAYDQLLDELVAANRILLHHQIVDSFGHVSARHPDRPDRFLMSG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC RKAPSLVERADIREFGLDGELAVPDGTPSFLERYIHSAIYTARPDVQSVVHSHSPGIIAF CCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEE GVVPETPLRPICHTCGFLGGGAPVFEIRDELGPASNLMITNQTLGLALAKKLGSASYVLM ECCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHHHCCCCEEEEE RGHGSTAVGRNLPESVYNAIYAETNARIQTTAMTMGPVTFLSPEEAAATSGGGPIVVERT ECCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCEEEECCHHHHHCCCCCCEEEECC WNHWKSEIAS HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA