| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114800358
Identifier: 114800358
GI number: 114800358
Start: 888225
End: 888878
Strand: Reverse
Name: 114800358
Synonym: HNE_0867
Alternate gene names: NA
Gene position: 888878-888225 (Counterclockwise)
Preceding gene: 114799997
Following gene: 114799589
Centisome position: 23.99
GC content: 66.67
Gene sequence:
>654_bases TTGCGTCGCCAAGTAACCGCCGCGCTGGCCTGCCTGCTGGGGGCCGGGATTGCCGGGGCGCAGATACCGCCCGAGGCACT GCCGCCGGTTGAGGCAGGCGACCTGTTGTTCAAGGGCGCCAATACCGGCGCAGGCACGCAGCTGGCGGCGATCTGGTCGC TGGGCGACAAGCGCTGGGGACATGTCGGAATCGCCGTTGAGAACGCCGATGGCACCCTCTCGGTGATCCATGCCGACACC GGCGCGCGGCGGGAGGCCGGCGCGGTCGTCCGGGTCAGCCTGGCGGACTATCTGGCGGATGTAGCCGATCTTGGCGTTTA CCGGATGGATCTGGAGGGCGCGCAGCAGGCCGCCTACCTCGCCTATGCCGAATCGGTTGTCGGACGGCCGTTTGACCGGT CGTTTTCGCTCGCATCCGATAACAGCCTTTACTGCTCAGAGCTGGTCTGGCGGGCGATGTCTGAGGGGCTGGGCGAAGAC GCGGTGCCGGCGAAAAGCGAGCGGATGGGCCGGGTCTATGTGTCGGTCTCGGATCTCGCCGCACACCCTCTGACGCAGGA GGCGGCCGTGATTACGGCGGCAGGCGCGGTCAATGGCACGGAATTGCGGGAAATGGGTGGAGACAAGCAAACGACCCGGA CTGAAGCTCGTTAG
Upstream 100 bases:
>100_bases TTCTCGTCGCTGACACGCTCTTATCGGCCCCGACCCTCGATGACGCGATGACGCTGATCTACGAATCGATCTCGGCGTCT GGCAGTTCGGTGCTTGCCAA
Downstream 100 bases:
>100_bases GGCTGCTCGGTTCCCCGCCTGACCCGATTGGCGAGCGGCCCGTCCGCCGCCTGCCTCCGAGGGCTATATGCGCAGCCGTT TTGCGAATCGCAAGCCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MRRQVTAALACLLGAGIAGAQIPPEALPPVEAGDLLFKGANTGAGTQLAAIWSLGDKRWGHVGIAVENADGTLSVIHADT GARREAGAVVRVSLADYLADVADLGVYRMDLEGAQQAAYLAYAESVVGRPFDRSFSLASDNSLYCSELVWRAMSEGLGED AVPAKSERMGRVYVSVSDLAAHPLTQEAAVITAAGAVNGTELREMGGDKQTTRTEAR
Sequences:
>Translated_217_residues MRRQVTAALACLLGAGIAGAQIPPEALPPVEAGDLLFKGANTGAGTQLAAIWSLGDKRWGHVGIAVENADGTLSVIHADT GARREAGAVVRVSLADYLADVADLGVYRMDLEGAQQAAYLAYAESVVGRPFDRSFSLASDNSLYCSELVWRAMSEGLGED AVPAKSERMGRVYVSVSDLAAHPLTQEAAVITAAGAVNGTELREMGGDKQTTRTEAR >Mature_217_residues MRRQVTAALACLLGAGIAGAQIPPEALPPVEAGDLLFKGANTGAGTQLAAIWSLGDKRWGHVGIAVENADGTLSVIHADT GARREAGAVVRVSLADYLADVADLGVYRMDLEGAQQAAYLAYAESVVGRPFDRSFSLASDNSLYCSELVWRAMSEGLGED AVPAKSERMGRVYVSVSDLAAHPLTQEAAVITAAGAVNGTELREMGGDKQTTRTEAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22660; Mature: 22660
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRQVTAALACLLGAGIAGAQIPPEALPPVEAGDLLFKGANTGAGTQLAAIWSLGDKRWG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCC HVGIAVENADGTLSVIHADTGARREAGAVVRVSLADYLADVADLGVYRMDLEGAQQAAYL EEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHCCEEEECCCCHHHHHHH AYAESVVGRPFDRSFSLASDNSLYCSELVWRAMSEGLGEDAVPAKSERMGRVYVSVSDLA HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHH AHPLTQEAAVITAAGAVNGTELREMGGDKQTTRTEAR CCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRRQVTAALACLLGAGIAGAQIPPEALPPVEAGDLLFKGANTGAGTQLAAIWSLGDKRWG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCC HVGIAVENADGTLSVIHADTGARREAGAVVRVSLADYLADVADLGVYRMDLEGAQQAAYL EEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHCCEEEECCCCHHHHHHH AYAESVVGRPFDRSFSLASDNSLYCSELVWRAMSEGLGEDAVPAKSERMGRVYVSVSDLA HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHH AHPLTQEAAVITAAGAVNGTELREMGGDKQTTRTEAR CCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA