The gene/protein map for NC_008358 is currently unavailable.
Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114800312

Identifier: 114800312

GI number: 114800312

Start: 2433047

End: 2434246

Strand: Direct

Name: 114800312

Synonym: HNE_2330

Alternate gene names: NA

Gene position: 2433047-2434246 (Clockwise)

Preceding gene: 114799189

Following gene: 114799294

Centisome position: 65.67

GC content: 61.17

Gene sequence:

>1200_bases
ATGGCGAGCGCGGCAACCAAGAATACATGGCTGATACTGCACCGTTGGTTCGGCATCATAACGGCGCTGTTCCTGTTCAT
CGCCGCCATCACCGGCAGCGTACTGACAGCCCGTTCCACGATCGACCGCTGGGCGAACGGGGACCTTTACACTTATACCG
GCGAAGCGGCCGACCGCCTCACGCCTCTGGAAGCCGTCGCCCTCTATGAAGCGGCCAACCCCGCGATACAGGTCACAGGA
TTTCCTCTGACTGCGGATGAAGAAGAAAACATCATCATTACGGTCACGCCCAAACCCGGCGCAGCGCCGCTTGACTATGA
AGAGGTCTTCCTCAGCCCTGCCACCGGCGAATCCGTCGGCGCGCGCAGCATGGCCCCCGGCCTGTCGAACCGCCAGATTA
TCCCGCTCATTCTTGAGCTTCACTACAATCTTCTGGTGGGGGACGCGGGCCGCATCTTCATGGGCTTCATCGCGCTGGGC
TGGCTGATCAGCTCCGGCGTCGGCCTTTACCTCACCTTCCCGCGCAAAGGCCCCTTCTTCAAGAACTGGCGCCCGGCCTG
GACTTACAGCCTGAAACGCCCCTTCGCGCGCCAGATGCTGGACCTTCACCGCGCCAGCGCCCTCTGGCTCTTTCCCTTCC
TGTTCATCCTGGCCTTCACCTCGGTCACGCTGAACTTCTTCGATGAATTCTGGGATCCCTTTTCCACTACGGTCGCCCCG
CTGGAAAAGTCGCTGTTCCATCTCGACGCCCCCTATCCCGAAGGCGCCGTGCCCCAGCTCACCTATGCCGAGGCCCTCAC
GCTCGCTGAGAACCAGGCTGCCGCTGAGGGCCAGGCCTGGAAACCGGCCACGATGCTCTATTACCCGAACTGGAATATCT
ACGGCACGACATTCAGCGACACCGGCGACCTGAACTATAAATATCTCGGGCCCATCTACCACTATTTCGACGCAAACACC
GGCGAATGGGTTCACGAAGTCAATCCCTATGCGGACAGTGCAGGTCTCGTCATGATCCGCGCGGTCTACCCGCTCCACTC
CGGTGAAATTGGCGGCTGGCTTACGGTGTTCTTCGTCTTCATCCTCGGCCTGGCAACGGCAGAACAATGCTTCACCGGCA
TCTGGCTGTGGCTGAAAAAGCGCGGGCCGCGCATCGCCGCGAAGAAGAAGGCCGCCAGCGCCGCCCCGGCCGAAGCCTGA

Upstream 100 bases:

>100_bases
TGGCGGACCCGATCGAGGTATTTTTAGACCCGGCGCGTTATGGCTGTTCCGCCCCCTCCCCCCTATCGTTCCGATTGAAT
AATAGCGGGAGGGGCCTCTC

Downstream 100 bases:

>100_bases
ACCTTTCCCTCACGGGCCGGCACGCCCATAAGAACAACACAAACAGAAGAGCCTTATCCATGAGCGTTTCGCCCTTGTCC
TGCGCGGATGAACTTGATCC

Product: PepSY-associated TM helix domain-containing protein

Products: NA

Alternate protein names: PepSY-Associated TM Helix; PepSY-Associated TM Helix Domain Protein; Iron-Regulated Membrane Protein; Sulfite Reductase; PepSY-Associated TM Helix Family; Pepsy-Associated Tm Helix Domain Protein

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MASAATKNTWLILHRWFGIITALFLFIAAITGSVLTARSTIDRWANGDLYTYTGEAADRLTPLEAVALYEAANPAIQVTG
FPLTADEEENIIITVTPKPGAAPLDYEEVFLSPATGESVGARSMAPGLSNRQIIPLILELHYNLLVGDAGRIFMGFIALG
WLISSGVGLYLTFPRKGPFFKNWRPAWTYSLKRPFARQMLDLHRASALWLFPFLFILAFTSVTLNFFDEFWDPFSTTVAP
LEKSLFHLDAPYPEGAVPQLTYAEALTLAENQAAAEGQAWKPATMLYYPNWNIYGTTFSDTGDLNYKYLGPIYHYFDANT
GEWVHEVNPYADSAGLVMIRAVYPLHSGEIGGWLTVFFVFILGLATAEQCFTGIWLWLKKRGPRIAAKKKAASAAPAEA

Sequences:

>Translated_399_residues
MASAATKNTWLILHRWFGIITALFLFIAAITGSVLTARSTIDRWANGDLYTYTGEAADRLTPLEAVALYEAANPAIQVTG
FPLTADEEENIIITVTPKPGAAPLDYEEVFLSPATGESVGARSMAPGLSNRQIIPLILELHYNLLVGDAGRIFMGFIALG
WLISSGVGLYLTFPRKGPFFKNWRPAWTYSLKRPFARQMLDLHRASALWLFPFLFILAFTSVTLNFFDEFWDPFSTTVAP
LEKSLFHLDAPYPEGAVPQLTYAEALTLAENQAAAEGQAWKPATMLYYPNWNIYGTTFSDTGDLNYKYLGPIYHYFDANT
GEWVHEVNPYADSAGLVMIRAVYPLHSGEIGGWLTVFFVFILGLATAEQCFTGIWLWLKKRGPRIAAKKKAASAAPAEA
>Mature_398_residues
ASAATKNTWLILHRWFGIITALFLFIAAITGSVLTARSTIDRWANGDLYTYTGEAADRLTPLEAVALYEAANPAIQVTGF
PLTADEEENIIITVTPKPGAAPLDYEEVFLSPATGESVGARSMAPGLSNRQIIPLILELHYNLLVGDAGRIFMGFIALGW
LISSGVGLYLTFPRKGPFFKNWRPAWTYSLKRPFARQMLDLHRASALWLFPFLFILAFTSVTLNFFDEFWDPFSTTVAPL
EKSLFHLDAPYPEGAVPQLTYAEALTLAENQAAAEGQAWKPATMLYYPNWNIYGTTFSDTGDLNYKYLGPIYHYFDANTG
EWVHEVNPYADSAGLVMIRAVYPLHSGEIGGWLTVFFVFILGLATAEQCFTGIWLWLKKRGPRIAAKKKAASAAPAEA

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44219; Mature: 44088

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAATKNTWLILHRWFGIITALFLFIAAITGSVLTARSTIDRWANGDLYTYTGEAADRL
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHC
TPLEAVALYEAANPAIQVTGFPLTADEEENIIITVTPKPGAAPLDYEEVFLSPATGESVG
CHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHEECCCCCCCCC
ARSMAPGLSNRQIIPLILELHYNLLVGDAGRIFMGFIALGWLISSGVGLYLTFPRKGPFF
CHHHCCCCCCCCHHHHHEEEHHHEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
KNWRPAWTYSLKRPFARQMLDLHRASALWLFPFLFILAFTSVTLNFFDEFWDPFSTTVAP
CCCCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LEKSLFHLDAPYPEGAVPQLTYAEALTLAENQAAAEGQAWKPATMLYYPNWNIYGTTFSD
HHHHHEECCCCCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCEEEEECCCCEEEEEEECC
TGDLNYKYLGPIYHYFDANTGEWVHEVNPYADSAGLVMIRAVYPLHSGEIGGWLTVFFVF
CCCCCEEEECCEEEEECCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
ILGLATAEQCFTGIWLWLKKRGPRIAAKKKAASAAPAEA
HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
ASAATKNTWLILHRWFGIITALFLFIAAITGSVLTARSTIDRWANGDLYTYTGEAADRL
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHC
TPLEAVALYEAANPAIQVTGFPLTADEEENIIITVTPKPGAAPLDYEEVFLSPATGESVG
CHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHEECCCCCCCCC
ARSMAPGLSNRQIIPLILELHYNLLVGDAGRIFMGFIALGWLISSGVGLYLTFPRKGPFF
CHHHCCCCCCCCHHHHHEEEHHHEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
KNWRPAWTYSLKRPFARQMLDLHRASALWLFPFLFILAFTSVTLNFFDEFWDPFSTTVAP
CCCCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LEKSLFHLDAPYPEGAVPQLTYAEALTLAENQAAAEGQAWKPATMLYYPNWNIYGTTFSD
HHHHHEECCCCCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCEEEEECCCCEEEEEEECC
TGDLNYKYLGPIYHYFDANTGEWVHEVNPYADSAGLVMIRAVYPLHSGEIGGWLTVFFVF
CCCCCEEEECCEEEEECCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
ILGLATAEQCFTGIWLWLKKRGPRIAAKKKAASAAPAEA
HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA