| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800011
Identifier: 114800011
GI number: 114800011
Start: 126362
End: 126937
Strand: Direct
Name: 114800011
Synonym: HNE_0142
Alternate gene names: NA
Gene position: 126362-126937 (Clockwise)
Preceding gene: 114798287
Following gene: 114798450
Centisome position: 3.41
GC content: 64.58
Gene sequence:
>576_bases ATGCGTCACCCGATTGGAATCATGATGGCCGGGGCGCTTGCGCTCGGGATTTCGGCGTGCACGCCGGCTGAAACGAGCGC CGAAATCGACACGGGCAACGTTGAGCCGCCCGCCATTGAGGCCGAGCCGGAAACAGAGGAAGCGCCCATGGGCGAGTATG AAATGGGTGAGATGCCCAGCGACGCCGACCAGGCCGCTGCGGCGGACGCGGCGCAGGCGGCGGCCGAGTCGGGCGTCGTC TATGCCGGGGAAGGGCAGAAAGGCGGAGACGTTTCCCTGCCGATGGGGCAGGTGCTCCGGATCGAACTCGAGACGATCCC AACGGCGGGGTATGTCTGGCAGGTCGTTGAGAAGCCTGACTTCCTGGAGCTGGCGGCGGAGAACACCCGGCCCACCAATC CGGCGCTTCAGAACCTGCCGGGCTTTACCGGCGGCAATCATTATATGAGCTTCGATCTCAGAGCGTCTGGCGAAGGCACG GGCGTGATCAAACTGACCGAGAGCCGTCCATGGGAAACCGAAGAGGCCCCGTCCGACACGTTTGAACTGACCGTCACGGT CACGGCTGCGGAGTAG
Upstream 100 bases:
>100_bases ACTGACGGCTGAGCCTGCGGCAATCCCCGCATTTCTGCGGAGTTGCTTTCGCCGGGCGCTGAACTTAGCGATACTGCCAT CGAACCACAGGAGCTTTTTT
Downstream 100 bases:
>100_bases GTAGGCCCCCTCTTGGCAGACACTCAGTCCTCCCCCCCCAAGACCGGCATCAATGCCGAGGGCTTCCTGACCGACAGCTG GTATCTGGCTGCTACCTCGG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRHPIGIMMAGALALGISACTPAETSAEIDTGNVEPPAIEAEPETEEAPMGEYEMGEMPSDADQAAAADAAQAAAESGVV YAGEGQKGGDVSLPMGQVLRIELETIPTAGYVWQVVEKPDFLELAAENTRPTNPALQNLPGFTGGNHYMSFDLRASGEGT GVIKLTESRPWETEEAPSDTFELTVTVTAAE
Sequences:
>Translated_191_residues MRHPIGIMMAGALALGISACTPAETSAEIDTGNVEPPAIEAEPETEEAPMGEYEMGEMPSDADQAAAADAAQAAAESGVV YAGEGQKGGDVSLPMGQVLRIELETIPTAGYVWQVVEKPDFLELAAENTRPTNPALQNLPGFTGGNHYMSFDLRASGEGT GVIKLTESRPWETEEAPSDTFELTVTVTAAE >Mature_191_residues MRHPIGIMMAGALALGISACTPAETSAEIDTGNVEPPAIEAEPETEEAPMGEYEMGEMPSDADQAAAADAAQAAAESGVV YAGEGQKGGDVSLPMGQVLRIELETIPTAGYVWQVVEKPDFLELAAENTRPTNPALQNLPGFTGGNHYMSFDLRASGEGT GVIKLTESRPWETEEAPSDTFELTVTVTAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19998; Mature: 19998
Theoretical pI: Translated: 3.71; Mature: 3.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHPIGIMMAGALALGISACTPAETSAEIDTGNVEPPAIEAEPETEEAPMGEYEMGEMPS CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC DADQAAAADAAQAAAESGVVYAGEGQKGGDVSLPMGQVLRIELETIPTAGYVWQVVEKPD CHHHHHHHHHHHHHHHCCEEEECCCCCCCCEECCCCEEEEEEEEECCCCCEEEEECCCCC FLELAAENTRPTNPALQNLPGFTGGNHYMSFDLRASGEGTGVIKLTESRPWETEEAPSDT CEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCE FELTVTVTAAE EEEEEEEEECC >Mature Secondary Structure MRHPIGIMMAGALALGISACTPAETSAEIDTGNVEPPAIEAEPETEEAPMGEYEMGEMPS CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC DADQAAAADAAQAAAESGVVYAGEGQKGGDVSLPMGQVLRIELETIPTAGYVWQVVEKPD CHHHHHHHHHHHHHHHCCEEEECCCCCCCCEECCCCEEEEEEEEECCCCCEEEEECCCCC FLELAAENTRPTNPALQNLPGFTGGNHYMSFDLRASGEGTGVIKLTESRPWETEEAPSDT CEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCE FELTVTVTAAE EEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA