| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is zraS [C]
Identifier: 114799972
GI number: 114799972
Start: 498883
End: 501486
Strand: Direct
Name: zraS [C]
Synonym: HNE_0507
Alternate gene names: 114799972
Gene position: 498883-501486 (Clockwise)
Preceding gene: 114798089
Following gene: 114800375
Centisome position: 13.47
GC content: 63.1
Gene sequence:
>2604_bases ATGAGTATTGATGCGGACACCCTAGAGCTGACACTCGCGGCGGCAAAGCCCGGCGAGGATGCTGATCCTGCCAAAGCAGG GGAACGCGAAGAAGGCCGGCGCGTCGATTTCCTGCAATTGGGCTTCTGGGCCTGTCTGCTGCTGTCCATCGCTGCGGCCA GCATTTCGCTGGCCTGGCCGAACGCATCGGGCGCGACGGGTTCCATCCTGCTGATCACCATGGCGTCGGGCGGGCTGGTT TTCCTGCTCTGGACCGTGCGGGGCGCTGGCCGGTTCATCGGCCTGTTCCCCGAAAAAGGCGCTGCAGCCCGCGTCGCCAA TGCCACCGCGCCGCGCTTCCCCTGGATTGAAGCGCTGGACGAGGCTGTGCTGGTCACTGATCCGGGCGGCGCGCCTGTCG CTGCCAACGAAGCCTATTCCGATCTCACCCGGCTCGCCTTGATTGCGGGCACAGCAGAATCCGGCCCGGTGACCGTTGAC CGCCTGTTCGGCGCCAATCCCGGCCTTGCCGCGCCCGTTTACCGCCTGTCGAAGTCAGCCAAGGCTGGCACGCAGCGCCG TGAAGTGCTGCCACCTCTGGCGCTTGGCCCGGAACAGGTGCCCGCCCAGTTTGAAGTTTCCGTCTCGCCGCTGCCCCGCG GCCGTGTCCTCTGGCGTATTCGCCGGATCGCCGGCCAGATCGAGGCGACCGGCGCGGCCGACCTCAAATCGCTGTATGTT GAAGACGCCCCCATGGGCTTCTTTGCCGCCAAGCCGGACGGCACCATCACCTATGCCAACTCCTGGCTGCGTGAACTGCT CGGCCTGCCCGAGACAGCCAAGAACATCCGCACCGACGACATCATGCGCCCCGAATTCGTGAAGATGCTCTCGCGCGACC GCAAATCCGGCGCGCCGGGCCGGGCTGATATTCAGCTCCGTGCGCGCGACGGGGTGGAGATTCCGGTTCAGGCAATCACC AGCTGGTCGGGCCGCGGGGCAGATGCTGCCGGCCGCACGATCGTGCTGGCAAGCCCCCAGGTGCTCAACGGCGGAGAGGA GCGCTTTGCGCTTCAGGCCGCTTCGCGCCCGCCGCGCCCGGATGGCGACCCGATGTTCGACGATGCGCCCTTCGGCGCTG TGCGTCTGGACGGGGACCGCGTTGATGGCGCTGTTATTCTTGATGCCAACCGTGCGCTGATGGAAATGACGGGCGGAAGG GCAACGCCGGGCAATCGCTTCTCGGACCTCTTTGTTTCGGATGAGGGCGAGGAAACACTCGCCACCCTTCTGGTCGACGC GATCGACAAGCCGGTGGCGCTGAAGACTGCCGGTGACGAAGCGCGGCATGTGAATGTGTTCGTGACACTGAACTCAACCG GCCGGCCTTCGGTGGCCTATATCATCGATATCACCGAGCAGCGCCTTCTGGAAACGCGCCTCGCCCATGGCGAGAAGATG CGCTCCATCGGCCAGCTGGCCGGCGTGGTGGCGCACGACTTCAACAACGTTCTGCAGGGCATCATCTTCAACTATGAAGA GCTGATGACGCGCCACCCTGTGGGTGATCCGTCCTATGAATACCTGCAATCGATTCACGAGTTTTCCTCGCGGGCCCGTG AGCTTGTCCGTATGCTGCTGGCCTATGCCCGCGCGCAGACCTTCAAGCGGGAAATCTTCAACGTCACGGACTTCCTGTCG GAATTCTCGATCCTGCTGCGTCAGGTGCTGGATGAACGGGTTGAGCTGGACGTGAAACACGGCCGCGACGTGCCCTGGAT CAAGGCAGACAAGAACCAGCTGGAAACAGCGATCATCAACCTTGCCACAAACGCCCGCGACGCGATGATTTCGCAGCGCA ATGGCGGCAAGCTGGTTATCCGGACGGCGCGCTCCACCGGCAAGGATGCCCATGCAATGGGCTTCAACTATGTCGAGGAT GGCGAATATCTGCTGATCGAAGTTGAAGACAACGGCACCGGCATGCCGCGCGAACTGCTCGACAAGATCTTCCAGCCTTT CTTCACCACGAAAGAACAGGGCTCGGGAACCGGTCTCGGTCTCGCAACTGTCTATGGCATCATCAAACAGTCGGGCGGGT ATGTCTGCCCGGTCTCGGCGGTGGGCAAGGGCACGACCTTCTATATCTACCTGCCTGCGCTCGCGGCAGAAGACATTCCT GAAGCCTCCGATATGGCCGAACAGGCCAAAGCTGTCGTCCGCCCGATGGACATGTCCGGGCGCGGACGTATTCTGCTTGT CGAGGATGAAGACGGTGTGCGCTCCATTGCGGCAACCCATCTGCGCCAGCGCGGCTATGAGGTGGAAGAGGCGTGCGACG GCGAGGAGGCCCTGGACATCCTCACTGACATGCCAGGCTCCTTCGATCTCATCATCTCGGATGTGGTTATGCCCGGTATG GACGGCCCCACGCTGATCCGGGAAGCCAAGGACAAGCTCGGCCATGCCCGTGTGATCTTCATCTCAGGCTATGCCGAGCG CGACCTTGCCCAGCAGCTGGACGACCGCGCGGTCTCTTTCTTGCCCAAGCCCTTCACGGTTCGACAGCTGTCGGAGCGGA TCAAACAGGAACTGGCCGGCATCGGCGGCAAGGAAGCCGCGTGA
Upstream 100 bases:
>100_bases AGTCTAGTGACGGCTTGGCATCGAGTTGCGTGATGCCAGCCTCGCATATGGCGTGGCCGTACCGGACGGTCTCGCGGGCC AAATGGAATGGCGGTAGACC
Downstream 100 bases:
>100_bases TGGAATGGTAGAGGCCGGCTTTCTCAGCCGGCCTTTTGCCATAGGGCTTTCAAAACCCCTGCAAAGTTTTCTGCGCGGTC ATGGCAGGCCCAGTGGCCGG
Product: putative sensor histidine kinase/response regulator CckA
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 867; Mature: 866
Protein sequence:
>867_residues MSIDADTLELTLAAAKPGEDADPAKAGEREEGRRVDFLQLGFWACLLLSIAAASISLAWPNASGATGSILLITMASGGLV FLLWTVRGAGRFIGLFPEKGAAARVANATAPRFPWIEALDEAVLVTDPGGAPVAANEAYSDLTRLALIAGTAESGPVTVD RLFGANPGLAAPVYRLSKSAKAGTQRREVLPPLALGPEQVPAQFEVSVSPLPRGRVLWRIRRIAGQIEATGAADLKSLYV EDAPMGFFAAKPDGTITYANSWLRELLGLPETAKNIRTDDIMRPEFVKMLSRDRKSGAPGRADIQLRARDGVEIPVQAIT SWSGRGADAAGRTIVLASPQVLNGGEERFALQAASRPPRPDGDPMFDDAPFGAVRLDGDRVDGAVILDANRALMEMTGGR ATPGNRFSDLFVSDEGEETLATLLVDAIDKPVALKTAGDEARHVNVFVTLNSTGRPSVAYIIDITEQRLLETRLAHGEKM RSIGQLAGVVAHDFNNVLQGIIFNYEELMTRHPVGDPSYEYLQSIHEFSSRARELVRMLLAYARAQTFKREIFNVTDFLS EFSILLRQVLDERVELDVKHGRDVPWIKADKNQLETAIINLATNARDAMISQRNGGKLVIRTARSTGKDAHAMGFNYVED GEYLLIEVEDNGTGMPRELLDKIFQPFFTTKEQGSGTGLGLATVYGIIKQSGGYVCPVSAVGKGTTFYIYLPALAAEDIP EASDMAEQAKAVVRPMDMSGRGRILLVEDEDGVRSIAATHLRQRGYEVEEACDGEEALDILTDMPGSFDLIISDVVMPGM DGPTLIREAKDKLGHARVIFISGYAERDLAQQLDDRAVSFLPKPFTVRQLSERIKQELAGIGGKEAA
Sequences:
>Translated_867_residues MSIDADTLELTLAAAKPGEDADPAKAGEREEGRRVDFLQLGFWACLLLSIAAASISLAWPNASGATGSILLITMASGGLV FLLWTVRGAGRFIGLFPEKGAAARVANATAPRFPWIEALDEAVLVTDPGGAPVAANEAYSDLTRLALIAGTAESGPVTVD RLFGANPGLAAPVYRLSKSAKAGTQRREVLPPLALGPEQVPAQFEVSVSPLPRGRVLWRIRRIAGQIEATGAADLKSLYV EDAPMGFFAAKPDGTITYANSWLRELLGLPETAKNIRTDDIMRPEFVKMLSRDRKSGAPGRADIQLRARDGVEIPVQAIT SWSGRGADAAGRTIVLASPQVLNGGEERFALQAASRPPRPDGDPMFDDAPFGAVRLDGDRVDGAVILDANRALMEMTGGR ATPGNRFSDLFVSDEGEETLATLLVDAIDKPVALKTAGDEARHVNVFVTLNSTGRPSVAYIIDITEQRLLETRLAHGEKM RSIGQLAGVVAHDFNNVLQGIIFNYEELMTRHPVGDPSYEYLQSIHEFSSRARELVRMLLAYARAQTFKREIFNVTDFLS EFSILLRQVLDERVELDVKHGRDVPWIKADKNQLETAIINLATNARDAMISQRNGGKLVIRTARSTGKDAHAMGFNYVED GEYLLIEVEDNGTGMPRELLDKIFQPFFTTKEQGSGTGLGLATVYGIIKQSGGYVCPVSAVGKGTTFYIYLPALAAEDIP EASDMAEQAKAVVRPMDMSGRGRILLVEDEDGVRSIAATHLRQRGYEVEEACDGEEALDILTDMPGSFDLIISDVVMPGM DGPTLIREAKDKLGHARVIFISGYAERDLAQQLDDRAVSFLPKPFTVRQLSERIKQELAGIGGKEAA >Mature_866_residues SIDADTLELTLAAAKPGEDADPAKAGEREEGRRVDFLQLGFWACLLLSIAAASISLAWPNASGATGSILLITMASGGLVF LLWTVRGAGRFIGLFPEKGAAARVANATAPRFPWIEALDEAVLVTDPGGAPVAANEAYSDLTRLALIAGTAESGPVTVDR LFGANPGLAAPVYRLSKSAKAGTQRREVLPPLALGPEQVPAQFEVSVSPLPRGRVLWRIRRIAGQIEATGAADLKSLYVE DAPMGFFAAKPDGTITYANSWLRELLGLPETAKNIRTDDIMRPEFVKMLSRDRKSGAPGRADIQLRARDGVEIPVQAITS WSGRGADAAGRTIVLASPQVLNGGEERFALQAASRPPRPDGDPMFDDAPFGAVRLDGDRVDGAVILDANRALMEMTGGRA TPGNRFSDLFVSDEGEETLATLLVDAIDKPVALKTAGDEARHVNVFVTLNSTGRPSVAYIIDITEQRLLETRLAHGEKMR SIGQLAGVVAHDFNNVLQGIIFNYEELMTRHPVGDPSYEYLQSIHEFSSRARELVRMLLAYARAQTFKREIFNVTDFLSE FSILLRQVLDERVELDVKHGRDVPWIKADKNQLETAIINLATNARDAMISQRNGGKLVIRTARSTGKDAHAMGFNYVEDG EYLLIEVEDNGTGMPRELLDKIFQPFFTTKEQGSGTGLGLATVYGIIKQSGGYVCPVSAVGKGTTFYIYLPALAAEDIPE ASDMAEQAKAVVRPMDMSGRGRILLVEDEDGVRSIAATHLRQRGYEVEEACDGEEALDILTDMPGSFDLIISDVVMPGMD GPTLIREAKDKLGHARVIFISGYAERDLAQQLDDRAVSFLPKPFTVRQLSERIKQELAGIGGKEAA
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=250, Percent_Identity=30, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI1788549, Length=252, Percent_Identity=30.5555555555556, Blast_Score=94, Evalue=5e-20, Organism=Escherichia coli, GI48994928, Length=409, Percent_Identity=23.4718826405868, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788713, Length=228, Percent_Identity=28.5087719298246, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI1790300, Length=249, Percent_Identity=29.3172690763052, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI87081816, Length=210, Percent_Identity=29.0476190476191, Blast_Score=74, Evalue=6e-14, Organism=Escherichia coli, GI1788550, Length=122, Percent_Identity=31.9672131147541, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 93827; Mature: 93696
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDADTLELTLAAAKPGEDADPAKAGEREEGRRVDFLQLGFWACLLLSIAAASISLAWP CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEEECC NASGATGSILLITMASGGLVFLLWTVRGAGRFIGLFPEKGAAARVANATAPRFPWIEALD CCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCCHHHCCCCCCCCCHHHHCC EAVLVTDPGGAPVAANEAYSDLTRLALIAGTAESGPVTVDRLFGANPGLAAPVYRLSKSA CEEEEECCCCCCCCCCHHHHHHHHHHHEECCCCCCCEEHHHHHCCCCCCCHHHHHHHCHH KAGTQRREVLPPLALGPEQVPAQFEVSVSPLPRGRVLWRIRRIAGQIEATGAADLKSLYV HCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH EDAPMGFFAAKPDGTITYANSWLRELLGLPETAKNIRTDDIMRPEFVKMLSRDRKSGAPG CCCCCCEEEECCCCCEEEHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC RADIQLRARDGVEIPVQAITSWSGRGADAAGRTIVLASPQVLNGGEERFALQAASRPPRP CCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEECCHHHCCCHHHEEEEECCCCCCC DGDPMFDDAPFGAVRLDGDRVDGAVILDANRALMEMTGGRATPGNRFSDLFVSDEGEETL CCCCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCEEEECCCCHHHH ATLLVDAIDKPVALKTAGDEARHVNVFVTLNSTGRPSVAYIIDITEQRLLETRLAHGEKM HHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHH RSIGQLAGVVAHDFNNVLQGIIFNYEELMTRHPVGDPSYEYLQSIHEFSSRARELVRMLL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AYARAQTFKREIFNVTDFLSEFSILLRQVLDERVELDVKHGRDVPWIKADKNQLETAIIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCHHHHHHHHHH LATNARDAMISQRNGGKLVIRTARSTGKDAHAMGFNYVEDGEYLLIEVEDNGTGMPRELL HHCCCHHHHHCCCCCCEEEEEECCCCCCCCHHCCCCEEECCCEEEEEECCCCCCCCHHHH DKIFQPFFTTKEQGSGTGLGLATVYGIIKQSGGYVCPVSAVGKGTTFYIYLPALAAEDIP HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECHHCCCCCEEEEEECCCCCCCCC EASDMAEQAKAVVRPMDMSGRGRILLVEDEDGVRSIAATHLRQRGYEVEEACDGEEALDI CHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHH LTDMPGSFDLIISDVVMPGMDGPTLIREAKDKLGHARVIFISGYAERDLAQQLDDRAVSF HHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHH LPKPFTVRQLSERIKQELAGIGGKEAA CCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SIDADTLELTLAAAKPGEDADPAKAGEREEGRRVDFLQLGFWACLLLSIAAASISLAWP CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEEECC NASGATGSILLITMASGGLVFLLWTVRGAGRFIGLFPEKGAAARVANATAPRFPWIEALD CCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCCHHHCCCCCCCCCHHHHCC EAVLVTDPGGAPVAANEAYSDLTRLALIAGTAESGPVTVDRLFGANPGLAAPVYRLSKSA CEEEEECCCCCCCCCCHHHHHHHHHHHEECCCCCCCEEHHHHHCCCCCCCHHHHHHHCHH KAGTQRREVLPPLALGPEQVPAQFEVSVSPLPRGRVLWRIRRIAGQIEATGAADLKSLYV HCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH EDAPMGFFAAKPDGTITYANSWLRELLGLPETAKNIRTDDIMRPEFVKMLSRDRKSGAPG CCCCCCEEEECCCCCEEEHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC RADIQLRARDGVEIPVQAITSWSGRGADAAGRTIVLASPQVLNGGEERFALQAASRPPRP CCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEECCHHHCCCHHHEEEEECCCCCCC DGDPMFDDAPFGAVRLDGDRVDGAVILDANRALMEMTGGRATPGNRFSDLFVSDEGEETL CCCCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCEEEECCCCHHHH ATLLVDAIDKPVALKTAGDEARHVNVFVTLNSTGRPSVAYIIDITEQRLLETRLAHGEKM HHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHH RSIGQLAGVVAHDFNNVLQGIIFNYEELMTRHPVGDPSYEYLQSIHEFSSRARELVRMLL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AYARAQTFKREIFNVTDFLSEFSILLRQVLDERVELDVKHGRDVPWIKADKNQLETAIIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCHHHHHHHHHH LATNARDAMISQRNGGKLVIRTARSTGKDAHAMGFNYVEDGEYLLIEVEDNGTGMPRELL HHCCCHHHHHCCCCCCEEEEEECCCCCCCCHHCCCCEEECCCEEEEEECCCCCCCCHHHH DKIFQPFFTTKEQGSGTGLGLATVYGIIKQSGGYVCPVSAVGKGTTFYIYLPALAAEDIP HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECHHCCCCCEEEEEECCCCCCCCC EASDMAEQAKAVVRPMDMSGRGRILLVEDEDGVRSIAATHLRQRGYEVEEACDGEEALDI CHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHH LTDMPGSFDLIISDVVMPGMDGPTLIREAKDKLGHARVIFISGYAERDLAQQLDDRAVSF HHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHH LPKPFTVRQLSERIKQELAGIGGKEAA CCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA