| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is rhlE [H]
Identifier: 114799942
GI number: 114799942
Start: 1126727
End: 1128121
Strand: Reverse
Name: rhlE [H]
Synonym: HNE_1118
Alternate gene names: 114799942
Gene position: 1128121-1126727 (Counterclockwise)
Preceding gene: 114797423
Following gene: 114798038
Centisome position: 30.45
GC content: 64.52
Gene sequence:
>1395_bases TTGACGAAAGTAATCATGTCCGATTTCCAATCCCTCGGCCTTACGGGCCGTATTCTCACGTCTTTGACCAAAGCCGGCTA CACAGCCCCTACCCCCATTCAGGAACAGGCCATACCTCTGGTCATCCAGGGCCGCGACATTGTCGGCCTCGCCCAGACCG GTACAGGCAAGACCCTTGCCTTCGCAGCCCCGATCCTTGACCGCCTCAGCCGCAACGCCAGCCCTGCACCTGTGCGCGGC ACCCGCGTTCTGGTGCTTGCACCAACGCGCGAACTGGCCGGCCAGATCGCCACCTCCTTCGGCACCTATGGCGCGGGCCT CAACCTCCGTGTCGTGATGGTGTGCGGCGGCGCAAAGATTGGCGGCCAGATCCGTCAGCTCGAGCGCGGCGCGCATATCC TGGTGGCAACACCCGGCCGCCTGATCGACCTGATGGAACAGCGCGCTGTTTCACTCGACAAGGTGGAAACCCTGATCCTC GACGAAGCCGACCAGATGCTGGACCTTGGCTTCATTCACGCCCTTCGTGCCATCGCGAAGAATGTGCCGTCCAAGCGCCA GACGCTGTTCTTCTCGGCCACCATGCCGAAAGCCGTCGAATCGCTGGCGGCGACCTTCCTGCGTAATCCGGCAGAAGTCT CCGTTGCGCCGCCAGCCACTACGGCAGGTCGCATTGAACAGCGCGTCTGCTTTGTGGAGCAGCCCGAAAAGGCTTCACTT CTGATCGAAAAAATCCGCGATCCGGAACTGCGCTCAGCGATCGTCTTTACCCGCACCAAGCATGGCGCAGACGGCGTTGT GAAACGCCTTGCCAAAGCGGACATCGACTCCGTTGCCATCCATGGCAACAAGAGCCAGTCCCAGCGGGAGAAAGCCCTCG AGGCCTTCAAGGCGGGCCGCGTGCCGATCCTGGTGGCGACCGACATTGCCGCCCGCGGCATTCACGTTGACGCCCTCACG CACGTCATCAACTATGACCTGCCGGATGTGCCCGAACAGTTCGTACACCGCATCGGCCGCACCGCCCGTGCCGGCAACTC GGGCGTGGCGATCTCCTTCTGCTCGCGCGATGAGCGCCCGACGCTCCGCGCCATCGAAAAACTCACGGGCCTGAAGCTGG CACCAAACGGCGTCAGCCTGCCGGACGAGCCTCTGCGCAAGCCCGGCAAGCCTCAGGGCAACCGTTCGGGCAATGGCGGC GGCCGTGGCGGCGCGCGCAGCGGCGGCGGCTATCAAGGCCAGTCATCCGGTTCACAGTCGGGCGGCTCGCACTCTGGCCG TCCGCATCGCAAAGGCCCGCCCGGCGGCGGCGCCAATGCTTCTGGCCAGAATTCCCAGCGCTCTTCCAATGGCGCGGCCC GTCCCCGCCGCTTCAAGGAACGTGCGGACGCCTGA
Upstream 100 bases:
>100_bases TCCAGACCCTTCCTTAGAGACAATTCACCCCACGTCCTGAATCACGCCGGGCCGTTATTTGCCCCCGACGCTGGCTGCTT GTTGCAGGTCCGGCGCCTTC
Downstream 100 bases:
>100_bases TCCGGCCTTCTGGCACATATCATAGTAAAAAGCCCCGGCATCGCTGCCGGGGCTTTTCTGTTCTGGGAGGGCGTTTGTGT GAAGCTTAGAACTTCCAGCC
Product: ATP-dependent RNA helicase RhlE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MTKVIMSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDRLSRNASPAPVRG TRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLIL DEADQMLDLGFIHALRAIAKNVPSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASL LIEKIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIAARGIHVDALT HVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLRAIEKLTGLKLAPNGVSLPDEPLRKPGKPQGNRSGNGG GRGGARSGGGYQGQSSGSQSGGSHSGRPHRKGPPGGGANASGQNSQRSSNGAARPRRFKERADA
Sequences:
>Translated_464_residues MTKVIMSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDRLSRNASPAPVRG TRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLIL DEADQMLDLGFIHALRAIAKNVPSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASL LIEKIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIAARGIHVDALT HVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLRAIEKLTGLKLAPNGVSLPDEPLRKPGKPQGNRSGNGG GRGGARSGGGYQGQSSGSQSGGSHSGRPHRKGPPGGGANASGQNSQRSSNGAARPRRFKERADA >Mature_463_residues TKVIMSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDRLSRNASPAPVRGT RVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILD EADQMLDLGFIHALRAIAKNVPSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASLL IEKIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIAARGIHVDALTH VINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLRAIEKLTGLKLAPNGVSLPDEPLRKPGKPQGNRSGNGGG RGGARSGGGYQGQSSGSQSGGSHSGRPHRKGPPGGGANASGQNSQRSSNGAARPRRFKERADA
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI301171467, Length=354, Percent_Identity=43.5028248587571, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI87196351, Length=363, Percent_Identity=42.6997245179063, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI301171475, Length=363, Percent_Identity=42.6997245179063, Blast_Score=282, Evalue=4e-76, Organism=Homo sapiens, GI148613856, Length=459, Percent_Identity=37.9084967320261, Blast_Score=278, Evalue=9e-75, Organism=Homo sapiens, GI169881239, Length=366, Percent_Identity=42.0765027322404, Blast_Score=278, Evalue=1e-74, Organism=Homo sapiens, GI13514809, Length=366, Percent_Identity=42.0765027322404, Blast_Score=278, Evalue=1e-74, Organism=Homo sapiens, GI38201710, Length=349, Percent_Identity=42.4068767908309, Blast_Score=277, Evalue=1e-74, Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=40.6779661016949, Blast_Score=276, Evalue=3e-74, Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=40.6779661016949, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=40.6779661016949, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=40.6779661016949, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI41327773, Length=411, Percent_Identity=38.9294403892944, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI4758138, Length=352, Percent_Identity=40.9090909090909, Blast_Score=267, Evalue=1e-71, Organism=Homo sapiens, GI41327771, Length=388, Percent_Identity=39.6907216494845, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=38.3333333333333, Blast_Score=262, Evalue=5e-70, Organism=Homo sapiens, GI222352149, Length=372, Percent_Identity=40.5913978494624, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI20149629, Length=366, Percent_Identity=38.2513661202186, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI45446747, Length=351, Percent_Identity=37.8917378917379, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI45446743, Length=351, Percent_Identity=37.8917378917379, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI224593278, Length=368, Percent_Identity=39.6739130434783, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI7661920, Length=375, Percent_Identity=33.3333333333333, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI31542656, Length=382, Percent_Identity=36.9109947643979, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI188035877, Length=386, Percent_Identity=34.7150259067358, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI55749865, Length=347, Percent_Identity=37.463976945245, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI164664518, Length=372, Percent_Identity=31.1827956989247, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI164419743, Length=381, Percent_Identity=33.3333333333333, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI51094101, Length=381, Percent_Identity=33.3333333333333, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI41327776, Length=366, Percent_Identity=35.792349726776, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI4503529, Length=380, Percent_Identity=33.4210526315789, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI13514831, Length=349, Percent_Identity=35.8166189111748, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI38569505, Length=367, Percent_Identity=35.149863760218, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI38569503, Length=367, Percent_Identity=35.149863760218, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=34.4262295081967, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI13129006, Length=387, Percent_Identity=34.3669250645995, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI50659095, Length=385, Percent_Identity=34.5454545454545, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI38327634, Length=336, Percent_Identity=34.5238095238095, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI41327779, Length=372, Percent_Identity=33.8709677419355, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI21040371, Length=354, Percent_Identity=29.9435028248588, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI4758112, Length=383, Percent_Identity=28.7206266318538, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI18375623, Length=383, Percent_Identity=28.7206266318538, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI256223453, Length=390, Percent_Identity=31.7948717948718, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=30.7304785894207, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI17505907, Length=404, Percent_Identity=29.4554455445545, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI164419732, Length=356, Percent_Identity=30.3370786516854, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI8922886, Length=365, Percent_Identity=29.041095890411, Blast_Score=139, Evalue=6e-33, Organism=Homo sapiens, GI6005743, Length=365, Percent_Identity=29.041095890411, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI256773275, Length=384, Percent_Identity=29.4270833333333, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI62241022, Length=346, Percent_Identity=29.4797687861272, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=27.9883381924198, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI154759257, Length=411, Percent_Identity=28.2238442822384, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI9966805, Length=333, Percent_Identity=29.4294294294294, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI62241024, Length=327, Percent_Identity=28.7461773700306, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI20336298, Length=218, Percent_Identity=35.7798165137615, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1787016, Length=361, Percent_Identity=50.415512465374, Blast_Score=352, Evalue=4e-98, Organism=Escherichia coli, GI87082221, Length=380, Percent_Identity=41.8421052631579, Blast_Score=285, Evalue=4e-78, Organism=Escherichia coli, GI1790214, Length=412, Percent_Identity=39.0776699029126, Blast_Score=258, Evalue=8e-70, Organism=Escherichia coli, GI1787605, Length=375, Percent_Identity=38.6666666666667, Blast_Score=246, Evalue=2e-66, Organism=Escherichia coli, GI1788930, Length=340, Percent_Identity=38.5294117647059, Blast_Score=216, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17510309, Length=379, Percent_Identity=40.3693931398417, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17510307, Length=379, Percent_Identity=40.3693931398417, Blast_Score=269, Evalue=3e-72, Organism=Caenorhabditis elegans, GI71995514, Length=379, Percent_Identity=40.3693931398417, Blast_Score=268, Evalue=3e-72, Organism=Caenorhabditis elegans, GI115533224, Length=414, Percent_Identity=37.9227053140097, Blast_Score=265, Evalue=4e-71, Organism=Caenorhabditis elegans, GI71995718, Length=383, Percent_Identity=39.686684073107, Blast_Score=259, Evalue=3e-69, Organism=Caenorhabditis elegans, GI32565321, Length=384, Percent_Identity=37.7604166666667, Blast_Score=254, Evalue=5e-68, Organism=Caenorhabditis elegans, GI17555296, Length=366, Percent_Identity=39.0710382513661, Blast_Score=251, Evalue=6e-67, Organism=Caenorhabditis elegans, GI86570094, Length=354, Percent_Identity=38.9830508474576, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI71995724, Length=379, Percent_Identity=33.509234828496, Blast_Score=242, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17507121, Length=375, Percent_Identity=33.3333333333333, Blast_Score=241, Evalue=5e-64, Organism=Caenorhabditis elegans, GI17507877, Length=417, Percent_Identity=36.4508393285372, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17507945, Length=397, Percent_Identity=35.0125944584383, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71999644, Length=356, Percent_Identity=35.6741573033708, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71999646, Length=356, Percent_Identity=35.6741573033708, Blast_Score=230, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71987143, Length=379, Percent_Identity=32.7176781002639, Blast_Score=228, Evalue=4e-60, Organism=Caenorhabditis elegans, GI17552114, Length=368, Percent_Identity=31.5217391304348, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17537549, Length=413, Percent_Identity=34.8668280871671, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17510559, Length=385, Percent_Identity=34.2857142857143, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=36.3881401617251, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17507881, Length=357, Percent_Identity=36.6946778711485, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI115532548, Length=381, Percent_Identity=34.1207349081365, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI115532546, Length=375, Percent_Identity=34.1333333333333, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17552642, Length=449, Percent_Identity=33.8530066815145, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17509811, Length=381, Percent_Identity=33.5958005249344, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71982858, Length=366, Percent_Identity=31.4207650273224, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI193208216, Length=409, Percent_Identity=32.7628361858191, Blast_Score=187, Evalue=9e-48, Organism=Caenorhabditis elegans, GI17505370, Length=364, Percent_Identity=33.5164835164835, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17508543, Length=383, Percent_Identity=30.5483028720627, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI71990816, Length=353, Percent_Identity=30.5949008498584, Blast_Score=168, Evalue=7e-42, Organism=Caenorhabditis elegans, GI193206561, Length=353, Percent_Identity=31.728045325779, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17556951, Length=382, Percent_Identity=30.6282722513089, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=30.8673469387755, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=31.2, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI25148203, Length=411, Percent_Identity=25.3041362530414, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17536103, Length=397, Percent_Identity=27.7078085642317, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17553716, Length=356, Percent_Identity=26.685393258427, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17536101, Length=397, Percent_Identity=27.7078085642317, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17536099, Length=397, Percent_Identity=27.7078085642317, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI25148291, Length=370, Percent_Identity=26.4864864864865, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI71982862, Length=229, Percent_Identity=31.4410480349345, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71997889, Length=368, Percent_Identity=26.0869565217391, Blast_Score=108, Evalue=9e-24, Organism=Caenorhabditis elegans, GI71987152, Length=87, Percent_Identity=43.6781609195402, Blast_Score=86, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6325138, Length=375, Percent_Identity=42.4, Blast_Score=290, Evalue=4e-79, Organism=Saccharomyces cerevisiae, GI6324217, Length=361, Percent_Identity=43.4903047091413, Blast_Score=281, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6324778, Length=415, Percent_Identity=38.5542168674699, Blast_Score=280, Evalue=5e-76, Organism=Saccharomyces cerevisiae, GI6321856, Length=372, Percent_Identity=39.7849462365591, Blast_Score=266, Evalue=7e-72, Organism=Saccharomyces cerevisiae, GI6321360, Length=359, Percent_Identity=39.2757660167131, Blast_Score=236, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6320224, Length=375, Percent_Identity=32.8, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6320449, Length=383, Percent_Identity=36.0313315926893, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=373, Percent_Identity=37.2654155495979, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6320173, Length=432, Percent_Identity=32.8703703703704, Blast_Score=229, Evalue=6e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=366, Percent_Identity=33.6065573770492, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6321963, Length=381, Percent_Identity=36.2204724409449, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6319714, Length=386, Percent_Identity=33.160621761658, Blast_Score=202, Evalue=7e-53, Organism=Saccharomyces cerevisiae, GI6323947, Length=386, Percent_Identity=33.419689119171, Blast_Score=200, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=33.5135135135135, Blast_Score=192, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=33.5135135135135, Blast_Score=192, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=383, Percent_Identity=29.7650130548303, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6321267, Length=366, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6322427, Length=379, Percent_Identity=31.6622691292876, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6324620, Length=382, Percent_Identity=31.413612565445, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=375, Percent_Identity=30.9333333333333, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=30.4136253041363, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6320400, Length=405, Percent_Identity=30.1234567901235, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=449, Percent_Identity=25.8351893095768, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6322876, Length=429, Percent_Identity=27.7389277389277, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6324366, Length=423, Percent_Identity=26.7139479905437, Blast_Score=117, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6321374, Length=187, Percent_Identity=28.8770053475936, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=42.1333333333333, Blast_Score=290, Evalue=2e-78, Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=41.4772727272727, Blast_Score=272, Evalue=3e-73, Organism=Drosophila melanogaster, GI24584994, Length=385, Percent_Identity=40.7792207792208, Blast_Score=269, Evalue=4e-72, Organism=Drosophila melanogaster, GI24584399, Length=414, Percent_Identity=37.1980676328502, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI21355075, Length=345, Percent_Identity=41.1594202898551, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24644483, Length=366, Percent_Identity=38.7978142076503, Blast_Score=261, Evalue=7e-70, Organism=Drosophila melanogaster, GI281361218, Length=366, Percent_Identity=38.7978142076503, Blast_Score=261, Evalue=7e-70, Organism=Drosophila melanogaster, GI24644481, Length=366, Percent_Identity=38.7978142076503, Blast_Score=261, Evalue=7e-70, Organism=Drosophila melanogaster, GI24644487, Length=366, Percent_Identity=38.7978142076503, Blast_Score=261, Evalue=8e-70, Organism=Drosophila melanogaster, GI45551833, Length=366, Percent_Identity=38.7978142076503, Blast_Score=261, Evalue=8e-70, Organism=Drosophila melanogaster, GI24644485, Length=366, Percent_Identity=38.7978142076503, Blast_Score=261, Evalue=8e-70, Organism=Drosophila melanogaster, GI24644479, Length=366, Percent_Identity=38.7978142076503, Blast_Score=261, Evalue=8e-70, Organism=Drosophila melanogaster, GI18857967, Length=452, Percent_Identity=35.3982300884956, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24642151, Length=351, Percent_Identity=39.8860398860399, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24585582, Length=366, Percent_Identity=37.1584699453552, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI17977678, Length=360, Percent_Identity=35.5555555555556, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI24645031, Length=375, Percent_Identity=33.6, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=37.9213483146067, Blast_Score=241, Evalue=8e-64, Organism=Drosophila melanogaster, GI17136814, Length=378, Percent_Identity=38.3597883597884, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI28575014, Length=352, Percent_Identity=33.8068181818182, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=41.2140575079872, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI21356161, Length=371, Percent_Identity=36.6576819407008, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24583279, Length=370, Percent_Identity=31.6216216216216, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24583281, Length=370, Percent_Identity=31.6216216216216, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=33.1506849315069, Blast_Score=207, Evalue=9e-54, Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=33.1506849315069, Blast_Score=207, Evalue=9e-54, Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=33.1506849315069, Blast_Score=207, Evalue=9e-54, Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=33.1506849315069, Blast_Score=207, Evalue=9e-54, Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=32.6869806094183, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=32.6869806094183, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI21355559, Length=373, Percent_Identity=34.8525469168901, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24666101, Length=373, Percent_Identity=33.5120643431635, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=29.7450424929178, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=29.7450424929178, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=29.7450424929178, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24642822, Length=364, Percent_Identity=29.9450549450549, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI17647335, Length=388, Percent_Identity=28.6082474226804, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI20130173, Length=442, Percent_Identity=30.9954751131222, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI28571338, Length=427, Percent_Identity=29.2740046838407, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI18859659, Length=427, Percent_Identity=29.2740046838407, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24643725, Length=390, Percent_Identity=27.6923076923077, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI24668515, Length=334, Percent_Identity=28.1437125748503, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI19920478, Length=360, Percent_Identity=27.7777777777778, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI24640164, Length=393, Percent_Identity=24.6819338422392, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI17136666, Length=409, Percent_Identity=27.1393643031785, Blast_Score=119, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49033; Mature: 48902
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVIMSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLA CCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCHH FAAPILDRLSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKI HHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC GGQIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAK CHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVPSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASL CCCCCHHEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHH LIEKIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGR HHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC VPILVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERP CEEEEECCHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCH TLRAIEKLTGLKLAPNGVSLPDEPLRKPGKPQGNRSGNGGGRGGARSGGGYQGQSSGSQS HHHHHHHHHCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSHSGRPHRKGPPGGGANASGQNSQRSSNGAARPRRFKERADA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure TKVIMSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLA CHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCHH FAAPILDRLSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKI HHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC GGQIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAK CHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVPSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASL CCCCCHHEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHH LIEKIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGR HHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC VPILVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERP CEEEEECCHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCH TLRAIEKLTGLKLAPNGVSLPDEPLRKPGKPQGNRSGNGGGRGGARSGGGYQGQSSGSQS HHHHHHHHHCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSHSGRPHRKGPPGGGANASGQNSQRSSNGAARPRRFKERADA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]