Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114799624
Identifier: 114799624
GI number: 114799624
Start: 184343
End: 185590
Strand: Direct
Name: 114799624
Synonym: HNE_0199
Alternate gene names: NA
Gene position: 184343-185590 (Clockwise)
Preceding gene: 114800391
Following gene: 114799280
Centisome position: 4.98
GC content: 61.7
Gene sequence:
>1248_bases ATGTCCATTCGCCTGCGCGCCCTAGGCGCTGCCGTTTCTGTGCTGGCATTTGCCGCCTGTTCGCCATCCACAACCGAACC GCCGCCCCCCGCTGGCGAAGTGCCCGCGCCGCTTTCGGCCGAGGGCGATTTTGGCGCGACGCTTCAGGCGGCCCTGATCG CCGCCAAGCCGGGCGAGACGATCCTGTTGCCCGAAGGCGTTTTCCAGCTGACCGATGGCCTGTCTCTGGATGTCGATGGC GTAACATTGCGCGGGGCAGGGCAGGAGAAGACGATCCTCGACTTCACCGGCCAGGAAGGCGCGGGCGAAGGCCTGCTCGT AACCTCCGATGATGTGCTGCTGATGGACTTCGGCGTGCGCAACACCAAGGGCGATGGCATCAAGTCCAAAGGCGCCGATC AGATCATCTACCGCTATCTGACAGTTGAATGGACGGGTGGTCCGGACGAAGCCAATGGCGCCTACGGCGTTTATCCGGTG GAATCGAAAAATGTGCTGGTTGAGAATGTAACCGTGCGCGCGGCATCGGACGCCGGCATCTATGTTGGCCAGTCAGACAA CATCATCGTGCGTAACTCCGTGGTCGAATATAACGTGGCGGGCATCGAGATCGAGAATTCGATGAATGCCGACGTCTATG GCAACATTGCCCGCAACAATACCGGGGGCATTCTGGTGTTTGACCTGCCAGACCTTCCGGTATCGGGCGGCAATTCCACC CGCATCTTCGACAATGAAATCATCGAGAACAACACTCGCAACTTTGCGCCGGCAGGCAATATCGTTGCCAGCGTGCCCTC GGGCACCGGGGTCATCGTGATGGCCAACCGGAATGTGCATGTGTTCGACAATAACTTTGACAACAACCGCTCGGCCCATG TGCTGATCATGTCGTATTCCGAGCCGTTCACGGACGAGACCTATAATCCACTGCCGCGTGATCTGGTGTTGCGGGACAAT GATTACGGCGCGGGCGGAGACGACCCGCAGGGTGATCTTGCTCCGCTGGCGGCCGCGCTGGGCGGCCAGCTGCCCGCCAT CGTGTGGGACGGGGTGGATCGCTGGGGCGAGGGCGAGCCGCAGGCTATGAACATTGCTGTCGAGGAGGCGTCCGAGGTTG GTTTCATCAGCTTTGGCCTCGGCAGGTATCCGATTGATCCGGCGGCCATGGCCCCTTCGCCGGAACGCCCGGTGGCCGTG GCAGCGGCCGAACCGGCAGCTGTGGTCCTGCCGCATGGCGACCGCTGA
Upstream 100 bases:
>100_bases CGGCATCAGACGGGCGCGGGCACCTAGCTCCGCGCCCGCTCTTGCTTTTCCCCGGATTGAAGTTGACACTCGCGTCATAA CAATTCCGGGGAGGGAAGAT
Downstream 100 bases:
>100_bases GGCAGGCCAGGCATGAAATGGCAGGGCTTCCTTGCGGCGCTTTTCCTGTTGGCGGGTTGTTCCGCCGGGGGGAAGGGCGC ACGCGGACCAGACCTTGACG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSIRLRALGAAVSVLAFAACSPSTTEPPPPAGEVPAPLSAEGDFGATLQAALIAAKPGETILLPEGVFQLTDGLSLDVDG VTLRGAGQEKTILDFTGQEGAGEGLLVTSDDVLLMDFGVRNTKGDGIKSKGADQIIYRYLTVEWTGGPDEANGAYGVYPV ESKNVLVENVTVRAASDAGIYVGQSDNIIVRNSVVEYNVAGIEIENSMNADVYGNIARNNTGGILVFDLPDLPVSGGNST RIFDNEIIENNTRNFAPAGNIVASVPSGTGVIVMANRNVHVFDNNFDNNRSAHVLIMSYSEPFTDETYNPLPRDLVLRDN DYGAGGDDPQGDLAPLAAALGGQLPAIVWDGVDRWGEGEPQAMNIAVEEASEVGFISFGLGRYPIDPAAMAPSPERPVAV AAAEPAAVVLPHGDR
Sequences:
>Translated_415_residues MSIRLRALGAAVSVLAFAACSPSTTEPPPPAGEVPAPLSAEGDFGATLQAALIAAKPGETILLPEGVFQLTDGLSLDVDG VTLRGAGQEKTILDFTGQEGAGEGLLVTSDDVLLMDFGVRNTKGDGIKSKGADQIIYRYLTVEWTGGPDEANGAYGVYPV ESKNVLVENVTVRAASDAGIYVGQSDNIIVRNSVVEYNVAGIEIENSMNADVYGNIARNNTGGILVFDLPDLPVSGGNST RIFDNEIIENNTRNFAPAGNIVASVPSGTGVIVMANRNVHVFDNNFDNNRSAHVLIMSYSEPFTDETYNPLPRDLVLRDN DYGAGGDDPQGDLAPLAAALGGQLPAIVWDGVDRWGEGEPQAMNIAVEEASEVGFISFGLGRYPIDPAAMAPSPERPVAV AAAEPAAVVLPHGDR >Mature_414_residues SIRLRALGAAVSVLAFAACSPSTTEPPPPAGEVPAPLSAEGDFGATLQAALIAAKPGETILLPEGVFQLTDGLSLDVDGV TLRGAGQEKTILDFTGQEGAGEGLLVTSDDVLLMDFGVRNTKGDGIKSKGADQIIYRYLTVEWTGGPDEANGAYGVYPVE SKNVLVENVTVRAASDAGIYVGQSDNIIVRNSVVEYNVAGIEIENSMNADVYGNIARNNTGGILVFDLPDLPVSGGNSTR IFDNEIIENNTRNFAPAGNIVASVPSGTGVIVMANRNVHVFDNNFDNNRSAHVLIMSYSEPFTDETYNPLPRDLVLRDND YGAGGDDPQGDLAPLAAALGGQLPAIVWDGVDRWGEGEPQAMNIAVEEASEVGFISFGLGRYPIDPAAMAPSPERPVAVA AAEPAAVVLPHGDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43421; Mature: 43290
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRLRALGAAVSVLAFAACSPSTTEPPPPAGEVPAPLSAEGDFGATLQAALIAAKPGET CEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCE ILLPEGVFQLTDGLSLDVDGVTLRGAGQEKTILDFTGQEGAGEGLLVTSDDVLLMDFGVR EEECCCHHHHCCCCEEEECCEEEECCCCCCEEEEECCCCCCCCEEEEECCCEEEEECCCC NTKGDGIKSKGADQIIYRYLTVEWTGGPDEANGAYGVYPVESKNVLVENVTVRAASDAGI CCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCE YVGQSDNIIVRNSVVEYNVAGIEIENSMNADVYGNIARNNTGGILVFDLPDLPVSGGNST EEECCCCEEEECCEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCC RIFDNEIIENNTRNFAPAGNIVASVPSGTGVIVMANRNVHVFDNNFDNNRSAHVLIMSYS EEECCHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEECCCCCCCCCEEEEEEECC EPFTDETYNPLPRDLVLRDNDYGAGGDDPQGDLAPLAAALGGQLPAIVWDGVDRWGEGEP CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHCCCCCC QAMNIAVEEASEVGFISFGLGRYPIDPAAMAPSPERPVAVAAAEPAAVVLPHGDR CEEEEEEECCCCCCEEEECCCCCCCCHHHCCCCCCCCEEEEECCCEEEEECCCCC >Mature Secondary Structure SIRLRALGAAVSVLAFAACSPSTTEPPPPAGEVPAPLSAEGDFGATLQAALIAAKPGET EEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCE ILLPEGVFQLTDGLSLDVDGVTLRGAGQEKTILDFTGQEGAGEGLLVTSDDVLLMDFGVR EEECCCHHHHCCCCEEEECCEEEECCCCCCEEEEECCCCCCCCEEEEECCCEEEEECCCC NTKGDGIKSKGADQIIYRYLTVEWTGGPDEANGAYGVYPVESKNVLVENVTVRAASDAGI CCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCE YVGQSDNIIVRNSVVEYNVAGIEIENSMNADVYGNIARNNTGGILVFDLPDLPVSGGNST EEECCCCEEEECCEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCC RIFDNEIIENNTRNFAPAGNIVASVPSGTGVIVMANRNVHVFDNNFDNNRSAHVLIMSYS EEECCHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEECCCCCCCCCEEEEEEECC EPFTDETYNPLPRDLVLRDNDYGAGGDDPQGDLAPLAAALGGQLPAIVWDGVDRWGEGEP CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHCCCCCC QAMNIAVEEASEVGFISFGLGRYPIDPAAMAPSPERPVAVAAAEPAAVVLPHGDR CEEEEEEECCCCCCEEEECCCCCCCCHHHCCCCCCCCEEEEECCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA