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The map label for this gene is phaC [H]

Identifier: 114799177

GI number: 114799177

Start: 2412480

End: 2414312

Strand: Direct

Name: phaC [H]

Synonym: HNE_2313

Alternate gene names: 114799177

Gene position: 2412480-2414312 (Clockwise)

Preceding gene: 114799617

Following gene: 114797290

Centisome position: 65.11

GC content: 61.76

Gene sequence:

>1833_bases
ATGGGCGGTAACAAGATACCAGCATCTGAGACACCCTCCATCGCTTCCCTGCTGATGGCGCAGGACCCGGCACGTCTGCA
AGTGCTGATGACCACACTGGCGCTGGCAAATACCGAATCCCAGGCCCTCCTCACCGAAGTGCTGACCGGCTCTGGCCCCC
TCGGCACCGTCTCGCAGGGCGACCCGATGGGCGCCGCCGACGCTTTCAGCAAGGTCGGCATGAGCCTGGCGCAGAACCCG
ATGGCGCTGATGCAGGCCAATATGGACCTGATGAAGGGCTGGATGGGCCTCTGGCAGGAGATGGTCACCGAAAGCATCAC
TGCCGAGCCCAAGCCCGAAAAAGACAAACGCTTCTCCGATCCCGAATGGCAGACCAATCCCGGCTTCAAATTCATCCGCA
AGGCGTATGACCTGAACGCCCGCTGGATGATGAGCCTCGCCGACCGCGCGCCCGGCCTGGATGAACCGATCCATCTGCGC
GCAAAATTCTTCATGCAGCTGCTGACCGACAGCCTCGCCCCGACGAACTATCTCGGCACCAATCCGCAGGCCCTCAAGGC
CTTCATCGAAAGCGGCGGCGAAAGCGTGCTGGCGGGCATCCGCATGGCGCGCGAAGACGTGCGCAAGGGCGGTGGCAAGC
TCCACATCACCCAGACCGACGAGACCCCGTTCAAGCTCGGCGAGAATGTCGCCACCGCGCCGGGTCAGGTTGTTTTCCGC
AACGACCTGATCGAGCTGATCCAGTACGCCCCGTCGCAAGCGACCGTCTATTCCAAGCCCCTGCTGATCTTCCCGCCCTG
GATCAACAAGTTCTACATCCTGGACCTGCAGGAAAAGAACTCGATGATCCGCTGGCTGGTCGTCCGTGGGCTGACGGTGT
TCGTCGTCTCCTGGCGCTCGGCCGATGGCGTCACGAAAGACTACACCTGGGACGATTACGCCAAAAAAGGCATCTATGCC
GCCGTCGAGGCCGCCCTGCAGGCGTCCGGCGCCAAGAGCCTCAACGCCGTGGGCTATTGCATCGGCGGCACACTGCTCAC
CTCCACGCTCGGCCATATGGCCGCCACCGGTTACAACAAGATCGACTCGGCAACCTTCTTCGCCTCACAGGCCGACTTTG
AACTCGCCGGAGACCTGAAAGTCTTCACCGATGGTCCGGGCCGGGATTATGTCTACGGCATCATCGAAAACCATGGCGGC
ATCATGCCCGGCAAGGACATGTACGAGACCTTCAACTGGCTCCGCCCGATTGATCTGGTCTGGCGCTATGTCATCGACCA
GTACATGCTGGGCAAGGAACCCCGCCCGTTCGACCTGCTCTACTGGAACGCCGACCAGACCAACATCCCCGGCCCCGTCC
ACAAGCGTTACCTCTCCGAATGCTACGCTGAAAACCGCCTTGCTCGCGGCGAATACACCGTGCTCGGAGAAAAGATCGAC
ATGGCCAACATCCAGATCCCGGTGATGTTGCAGGCCTCAAAGGACGATCACATCGTCCCGTTTGAAAGTGTCTACCGCTC
GGCCAAGCGCTTTGGCGGCGACACCACCTTCATTCTCTCCGGGTCCGGACATATCGCCGGCGTCGTAAACCACCCCGACG
CGAAGAAATACCAGCACTGGACCAATCCCGGCGTCGCGGAAAGCTCGGCCAATAACTGGCTGGGCGCCGCCACCGAAACC
CCCGGCAGCTGGTGGCCCACCTGGTGGGCCTGGCTGAAGCCGAAATCCGGCCGCAAAGTCAAAGCCGTCGAGCCCAAGGA
CATGGGCCTGGGCGCCGCGCCCGGCACCTATGTCAAAGTGCGCCTGGAAGACATCAAGCTACCACCGCAGTAG

Upstream 100 bases:

>100_bases
AATCAGGAGGGGAATCGCCGTGTTTTTCATGGTTAAGCTCATTAAATGACAAACATTCCGAAGGATAGATTAGCCCAAAC
AAGGGGCGAAACTACGACAC

Downstream 100 bases:

>100_bases
CCCCACCTCTCCGTGGGAGGTGAAGGTCTTAAACCTTGAGCCCCGCGCCCTCATCCAGCCCCAGCGCAATATTCAGATTC
TGCACCGCCGCCCCTGAAGC

Product: PHA/PHB synthase family protein

Products: NA

Alternate protein names: PHA polymerase; PHA synthase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MGGNKIPASETPSIASLLMAQDPARLQVLMTTLALANTESQALLTEVLTGSGPLGTVSQGDPMGAADAFSKVGMSLAQNP
MALMQANMDLMKGWMGLWQEMVTESITAEPKPEKDKRFSDPEWQTNPGFKFIRKAYDLNARWMMSLADRAPGLDEPIHLR
AKFFMQLLTDSLAPTNYLGTNPQALKAFIESGGESVLAGIRMAREDVRKGGGKLHITQTDETPFKLGENVATAPGQVVFR
NDLIELIQYAPSQATVYSKPLLIFPPWINKFYILDLQEKNSMIRWLVVRGLTVFVVSWRSADGVTKDYTWDDYAKKGIYA
AVEAALQASGAKSLNAVGYCIGGTLLTSTLGHMAATGYNKIDSATFFASQADFELAGDLKVFTDGPGRDYVYGIIENHGG
IMPGKDMYETFNWLRPIDLVWRYVIDQYMLGKEPRPFDLLYWNADQTNIPGPVHKRYLSECYAENRLARGEYTVLGEKID
MANIQIPVMLQASKDDHIVPFESVYRSAKRFGGDTTFILSGSGHIAGVVNHPDAKKYQHWTNPGVAESSANNWLGAATET
PGSWWPTWWAWLKPKSGRKVKAVEPKDMGLGAAPGTYVKVRLEDIKLPPQ

Sequences:

>Translated_610_residues
MGGNKIPASETPSIASLLMAQDPARLQVLMTTLALANTESQALLTEVLTGSGPLGTVSQGDPMGAADAFSKVGMSLAQNP
MALMQANMDLMKGWMGLWQEMVTESITAEPKPEKDKRFSDPEWQTNPGFKFIRKAYDLNARWMMSLADRAPGLDEPIHLR
AKFFMQLLTDSLAPTNYLGTNPQALKAFIESGGESVLAGIRMAREDVRKGGGKLHITQTDETPFKLGENVATAPGQVVFR
NDLIELIQYAPSQATVYSKPLLIFPPWINKFYILDLQEKNSMIRWLVVRGLTVFVVSWRSADGVTKDYTWDDYAKKGIYA
AVEAALQASGAKSLNAVGYCIGGTLLTSTLGHMAATGYNKIDSATFFASQADFELAGDLKVFTDGPGRDYVYGIIENHGG
IMPGKDMYETFNWLRPIDLVWRYVIDQYMLGKEPRPFDLLYWNADQTNIPGPVHKRYLSECYAENRLARGEYTVLGEKID
MANIQIPVMLQASKDDHIVPFESVYRSAKRFGGDTTFILSGSGHIAGVVNHPDAKKYQHWTNPGVAESSANNWLGAATET
PGSWWPTWWAWLKPKSGRKVKAVEPKDMGLGAAPGTYVKVRLEDIKLPPQ
>Mature_609_residues
GGNKIPASETPSIASLLMAQDPARLQVLMTTLALANTESQALLTEVLTGSGPLGTVSQGDPMGAADAFSKVGMSLAQNPM
ALMQANMDLMKGWMGLWQEMVTESITAEPKPEKDKRFSDPEWQTNPGFKFIRKAYDLNARWMMSLADRAPGLDEPIHLRA
KFFMQLLTDSLAPTNYLGTNPQALKAFIESGGESVLAGIRMAREDVRKGGGKLHITQTDETPFKLGENVATAPGQVVFRN
DLIELIQYAPSQATVYSKPLLIFPPWINKFYILDLQEKNSMIRWLVVRGLTVFVVSWRSADGVTKDYTWDDYAKKGIYAA
VEAALQASGAKSLNAVGYCIGGTLLTSTLGHMAATGYNKIDSATFFASQADFELAGDLKVFTDGPGRDYVYGIIENHGGI
MPGKDMYETFNWLRPIDLVWRYVIDQYMLGKEPRPFDLLYWNADQTNIPGPVHKRYLSECYAENRLARGEYTVLGEKIDM
ANIQIPVMLQASKDDHIVPFESVYRSAKRFGGDTTFILSGSGHIAGVVNHPDAKKYQHWTNPGVAESSANNWLGAATETP
GSWWPTWWAWLKPKSGRKVKAVEPKDMGLGAAPGTYVKVRLEDIKLPPQ

Specific function: Unknown

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 67398; Mature: 67267

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGNKIPASETPSIASLLMAQDPARLQVLMTTLALANTESQALLTEVLTGSGPLGTVSQG
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC
DPMGAADAFSKVGMSLAQNPMALMQANMDLMKGWMGLWQEMVTESITAEPKPEKDKRFSD
CCCCHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PEWQTNPGFKFIRKAYDLNARWMMSLADRAPGLDEPIHLRAKFFMQLLTDSLAPTNYLGT
CCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
NPQALKAFIESGGESVLAGIRMAREDVRKGGGKLHITQTDETPFKLGENVATAPGQVVFR
CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCEEEH
NDLIELIQYAPSQATVYSKPLLIFPPWINKFYILDLQEKNSMIRWLVVRGLTVFVVSWRS
HHHHHHHHHCCCCCEEECCCEEEECCCCCEEEEEEECCCCCHHHHHHHCCEEEEEEEECC
ADGVTKDYTWDDYAKKGIYAAVEAALQASGAKSLNAVGYCIGGTLLTSTLGHMAATGYNK
CCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
IDSATFFASQADFELAGDLKVFTDGPGRDYVYGIIENHGGIMPGKDMYETFNWLRPIDLV
CCCCEEEECCCCCEEECCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHH
WRYVIDQYMLGKEPRPFDLLYWNADQTNIPGPVHKRYLSECYAENRLARGEYTVLGEKID
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEC
MANIQIPVMLQASKDDHIVPFESVYRSAKRFGGDTTFILSGSGHIAGVVNHPDAKKYQHW
CCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCHHHCCC
TNPGVAESSANNWLGAATETPGSWWPTWWAWLKPKSGRKVKAVEPKDMGLGAAPGTYVKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCEEEE
RLEDIKLPPQ
EEECCCCCCC
>Mature Secondary Structure 
GGNKIPASETPSIASLLMAQDPARLQVLMTTLALANTESQALLTEVLTGSGPLGTVSQG
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC
DPMGAADAFSKVGMSLAQNPMALMQANMDLMKGWMGLWQEMVTESITAEPKPEKDKRFSD
CCCCHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PEWQTNPGFKFIRKAYDLNARWMMSLADRAPGLDEPIHLRAKFFMQLLTDSLAPTNYLGT
CCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
NPQALKAFIESGGESVLAGIRMAREDVRKGGGKLHITQTDETPFKLGENVATAPGQVVFR
CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCEEEH
NDLIELIQYAPSQATVYSKPLLIFPPWINKFYILDLQEKNSMIRWLVVRGLTVFVVSWRS
HHHHHHHHHCCCCCEEECCCEEEECCCCCEEEEEEECCCCCHHHHHHHCCEEEEEEEECC
ADGVTKDYTWDDYAKKGIYAAVEAALQASGAKSLNAVGYCIGGTLLTSTLGHMAATGYNK
CCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
IDSATFFASQADFELAGDLKVFTDGPGRDYVYGIIENHGGIMPGKDMYETFNWLRPIDLV
CCCCEEEECCCCCEEECCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHH
WRYVIDQYMLGKEPRPFDLLYWNADQTNIPGPVHKRYLSECYAENRLARGEYTVLGEKID
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEC
MANIQIPVMLQASKDDHIVPFESVYRSAKRFGGDTTFILSGSGHIAGVVNHPDAKKYQHW
CCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCHHHCCC
TNPGVAESSANNWLGAATETPGSWWPTWWAWLKPKSGRKVKAVEPKDMGLGAAPGTYVKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCEEEE
RLEDIKLPPQ
EEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7763712 [H]