Click here to switch to the map view.

The map label for this gene is yadS [C]

Identifier: 114798893

GI number: 114798893

Start: 3136215

End: 3136847

Strand: Reverse

Name: yadS [C]

Synonym: HNE_2978

Alternate gene names: 114798893

Gene position: 3136847-3136215 (Counterclockwise)

Preceding gene: 114797595

Following gene: 114797609

Centisome position: 84.66

GC content: 66.67

Gene sequence:

>633_bases
ATGAACCCCATCCTGATCCTCGACTATGCGGGCATCGCCGTCTTCGCCGCCACCGGCGCGCTGGCTGCCTCGCGCAAGCA
GCTCGACATCATCGGCTTCCTGTTCTTCGCCGCCTTCACCGGGGTAGGGGGCGGCACGGTGCGCGATCTGATCCTCGATG
TGCCCGTCTTCTGGGTGGCCAATCATGACTATCTGCTGATCTGCCTCGTCACCGCTATCCTGGTCTACTTCACCGCCCAC
CTGTTTGAGTCCCGCTACAAGCTCCTCCTCTGGCTCGATGCCCTCGGCCTTGCTGCCTATTGCGTCTTTGGCGCGTGGAA
GGCGCTGGAGGTTACCGGCTCGCCCGTCATCGCCGTCGTCATGGGCGTCATCACGGCGAGCTTCGGCGGCATCCTGCGCG
ACCAGCTCGCGGGAGAGCCCTGCATCCTCCTGCGCCCGGAGATCTACATCACCGCGGCGCTGGCCGGCAGCGCGGTCTAT
ACCGGCCTCCACCTGGCGGGCCTTCCCCTGATGGCCGCCGCCGTGCCTGCCGCCCTCGTTGCCTTCGCCATAAGGGGCGG
GGCGATGAAGTTCGGCTGGTCGATCCCCGGCTACAAGACGCGCCCCGGCCGCCCCGCCGAAGAGATCGAATGA

Upstream 100 bases:

>100_bases
AAACTGATTCACTCTGCAATAAGAGCGGTAAGCTTACTAGCCCAATTGACGCCCTTCTCTCTCTCCCCCATGCCTCTCCC
TCACACTCCGGGAGCGCGCC

Downstream 100 bases:

>100_bases
GCCGGGTTTAGGTGTCCCAAACTGTCCCAAGCTGTCCCAAAGTGTCCTGAACTGTCCCGATCTGTCCTGGAATTGGCCAG
CCTTTGACCGGCTTTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MNPILILDYAGIAVFAATGALAASRKQLDIIGFLFFAAFTGVGGGTVRDLILDVPVFWVANHDYLLICLVTAILVYFTAH
LFESRYKLLLWLDALGLAAYCVFGAWKALEVTGSPVIAVVMGVITASFGGILRDQLAGEPCILLRPEIYITAALAGSAVY
TGLHLAGLPLMAAAVPAALVAFAIRGGAMKFGWSIPGYKTRPGRPAEEIE

Sequences:

>Translated_210_residues
MNPILILDYAGIAVFAATGALAASRKQLDIIGFLFFAAFTGVGGGTVRDLILDVPVFWVANHDYLLICLVTAILVYFTAH
LFESRYKLLLWLDALGLAAYCVFGAWKALEVTGSPVIAVVMGVITASFGGILRDQLAGEPCILLRPEIYITAALAGSAVY
TGLHLAGLPLMAAAVPAALVAFAIRGGAMKFGWSIPGYKTRPGRPAEEIE
>Mature_210_residues
MNPILILDYAGIAVFAATGALAASRKQLDIIGFLFFAAFTGVGGGTVRDLILDVPVFWVANHDYLLICLVTAILVYFTAH
LFESRYKLLLWLDALGLAAYCVFGAWKALEVTGSPVIAVVMGVITASFGGILRDQLAGEPCILLRPEIYITAALAGSAVY
TGLHLAGLPLMAAAVPAALVAFAIRGGAMKFGWSIPGYKTRPGRPAEEIE

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=198, Percent_Identity=40.4040404040404, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI87082304, Length=160, Percent_Identity=38.125, Blast_Score=103, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22232; Mature: 22232

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPILILDYAGIAVFAATGALAASRKQLDIIGFLFFAAFTGVGGGTVRDLILDVPVFWVA
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEE
NHDYLLICLVTAILVYFTAHLFESRYKLLLWLDALGLAAYCVFGAWKALEVTGSPVIAVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHH
MGVITASFGGILRDQLAGEPCILLRPEIYITAALAGSAVYTGLHLAGLPLMAAAVPAALV
HHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHH
AFAIRGGAMKFGWSIPGYKTRPGRPAEEIE
HHHHCCCCEEECCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure
MNPILILDYAGIAVFAATGALAASRKQLDIIGFLFFAAFTGVGGGTVRDLILDVPVFWVA
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEE
NHDYLLICLVTAILVYFTAHLFESRYKLLLWLDALGLAAYCVFGAWKALEVTGSPVIAVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHH
MGVITASFGGILRDQLAGEPCILLRPEIYITAALAGSAVYTGLHLAGLPLMAAAVPAALV
HHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHH
AFAIRGGAMKFGWSIPGYKTRPGRPAEEIE
HHHHCCCCEEECCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301; 1741267 [H]