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The map label for this gene is fliN [C]

Identifier: 114798836

GI number: 114798836

Start: 234339

End: 234638

Strand: Direct

Name: fliN [C]

Synonym: HNE_0244

Alternate gene names: 114798836

Gene position: 234339-234638 (Clockwise)

Preceding gene: 114797896

Following gene: 114798811

Centisome position: 6.32

GC content: 54.33

Gene sequence:

>300_bases
ATGACGGAGTTCGACGGTCAGGACCGCCGCGATCCGTCAGGGCGCAATTCCTACCGCCGCTCGATCTACAGTGTACCGGT
AACGGTTACGGTCTCGATTGGTCAGAAGCGTCTCAGCGTGCAGGAAATTCTGGAGCTTCAGCCTGATTCCGTGATCGCGC
TGTCTTCAAAGGTGGACGATCCGGTGGATCTTTTCATTGATGACAAGCTGATCGCGAAGGGTGAGCTGGTTGAGACCGAT
GACGGCCAGATTGCCGTGAAGATCGTTGAAATCATTGAAAAGGCCATTGAGCCGGAATGA

Upstream 100 bases:

>100_bases
GTTTTGACTTCGAGAGTCTGTTGGACGCCTGCCTGAATGATCTTGGATCAACACATAAAAAGAATACGGAGTACAAATGA
TGGCTACCCCCGAAAAGGCG

Downstream 100 bases:

>100_bases
TCAGGGCGGCAGCCTTCTATCGTATCCTGTTTCTGGCTGCTTTTGCCGCCTGCCTGGCCTTTTCCGGACACGCACAGGAG
GCGCCCGCTGCGCTGGACGG

Product: putative flagellar motor switch protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MTEFDGQDRRDPSGRNSYRRSIYSVPVTVTVSIGQKRLSVQEILELQPDSVIALSSKVDDPVDLFIDDKLIAKGELVETD
DGQIAVKIVEIIEKAIEPE

Sequences:

>Translated_99_residues
MTEFDGQDRRDPSGRNSYRRSIYSVPVTVTVSIGQKRLSVQEILELQPDSVIALSSKVDDPVDLFIDDKLIAKGELVETD
DGQIAVKIVEIIEKAIEPE
>Mature_98_residues
TEFDGQDRRDPSGRNSYRRSIYSVPVTVTVSIGQKRLSVQEILELQPDSVIALSSKVDDPVDLFIDDKLIAKGELVETDD
GQIAVKIVEIIEKAIEPE

Specific function: Flin Is One Of Three Proteins (Flig, Flin, Flim) That Form A Switch Complex That Is Proposed To Be Located At The Base Of The Basal Body. This Complex Interacts With The Chey And Chez Chemotaxis Proteins, In Addition To Contacting Components Of The Motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11030; Mature: 10898

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFDGQDRRDPSGRNSYRRSIYSVPVTVTVSIGQKRLSVQEILELQPDSVIALSSKVDD
CCCCCCCCCCCCCCCCHHHHHEECCCEEEEEECCCCCCCHHHHHHCCCCCEEEECCCCCC
PVDLFIDDKLIAKGELVETDDGQIAVKIVEIIEKAIEPE
CEEEEECCCEECCCCEEECCCCEEEHHHHHHHHHHCCCC
>Mature Secondary Structure 
TEFDGQDRRDPSGRNSYRRSIYSVPVTVTVSIGQKRLSVQEILELQPDSVIALSSKVDD
CCCCCCCCCCCCCCCHHHHHEECCCEEEEEECCCCCCCHHHHHHCCCCCEEEECCCCCC
PVDLFIDDKLIAKGELVETDDGQIAVKIVEIIEKAIEPE
CEEEEECCCEECCCCEEECCCCEEEHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA