Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is yadI [C]
Identifier: 114798812
GI number: 114798812
Start: 435380
End: 435784
Strand: Direct
Name: yadI [C]
Synonym: HNE_0438
Alternate gene names: 114798812
Gene position: 435380-435784 (Clockwise)
Preceding gene: 114798226
Following gene: 114800448
Centisome position: 11.75
GC content: 61.48
Gene sequence:
>405_bases ATGATCGGCATTGTAGTTGTCAGCCATGGAAGATTAGCCCACGAGCTCGTCGCAGCAGCGGAGCACGTTGTGGGCCGCCT TTGGCGTGCGCGCGCCGTCTCTATCGATTCTGACGATGACCTCGACCTCAAGCGTGAGCACATTCTGGCCGCTGTGAAAG CCTGCGATGCAGGTCGCGGCGTTATCGTACTGACCGACATGTTCGGCGGCACGCCTTCAAACCTCGTCCTGTCCATCCGC GGCAGTGTGCCGATGGAAATCGTCTCCGGCGCAAATCTGCCGATGCTGATCAAGCTGGCCGAAGTCCGTGAAGTGCTGAG CCTGGAAGAGGCGGCGATCGCTGCCGCAGAGGGCGGGCGCAAATATGTGACCATCGCGTCCGAACTGCTGGCCCGGCTGC CCTGA
Upstream 100 bases:
>100_bases AGGAAAGCGCCGTCATATCAGCCGAATGCGCCTTGACGCGGCGCAGCATCGTGACAACGTGACGGTTGTTTAACGTTCAG GGTTGCATCCCAGTAGCGGA
Downstream 100 bases:
>100_bases TGTCGACGTCCGTTCCGGCAGCCTCTGCCCGTGTCACGATTGTCAATCGTAAGGGCCTGCATGCGCGGGCGTCGGCGAAG GTCGCCAAGCTTGCGGCCGA
Product: PTS system mannose/fructose/sorbose family transporter subunit IID
Products: protein histidine; sugar phosphate
Alternate protein names: PTS System IIA Component; PTS System Fructose IIA Component; PTS System IIA Component Man Family; Fructose-Specific IIA Component; PTS System Transporter Subunit IIA; Pts System Mannose-Specific Eiiab Component; PTS Mannose-Specific IIA Component; PTS System Mannose Subfamily IIA Subunit; Pts System Fructose Subfamily IIa Component; Pts System Mannose/Fructose/Sorbose Family IIa Component; PTS System Fructose Subfamily Transprotein Subunit IIA; Pts System Fructose IIA Component; PTS System Mannose/Fructose-Specific Component IIA; PTS System Component IIA; Phosphotransferase System IIA Component; Phosphotransferase System Fructose Subfamily IIA Component; Phosphotransferase System Fructose-Specific IIA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MIGIVVVSHGRLAHELVAAAEHVVGRLWRARAVSIDSDDDLDLKREHILAAVKACDAGRGVIVLTDMFGGTPSNLVLSIR GSVPMEIVSGANLPMLIKLAEVREVLSLEEAAIAAAEGGRKYVTIASELLARLP
Sequences:
>Translated_134_residues MIGIVVVSHGRLAHELVAAAEHVVGRLWRARAVSIDSDDDLDLKREHILAAVKACDAGRGVIVLTDMFGGTPSNLVLSIR GSVPMEIVSGANLPMLIKLAEVREVLSLEEAAIAAAEGGRKYVTIASELLARLP >Mature_134_residues MIGIVVVSHGRLAHELVAAAEHVVGRLWRARAVSIDSDDDLDLKREHILAAVKACDAGRGVIVLTDMFGGTPSNLVLSIR GSVPMEIVSGANLPMLIKLAEVREVLSLEEAAIAAAEGGRKYVTIASELLARLP
Specific function: Unknown
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 14186; Mature: 14186
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGIVVVSHGRLAHELVAAAEHVVGRLWRARAVSIDSDDDLDLKREHILAAVKACDAGRG CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCCC VIVLTDMFGGTPSNLVLSIRGSVPMEIVSGANLPMLIKLAEVREVLSLEEAAIAAAEGGR EEEEEECCCCCCCCEEEEECCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCC KYVTIASELLARLP EEEHHHHHHHHHCC >Mature Secondary Structure MIGIVVVSHGRLAHELVAAAEHVVGRLWRARAVSIDSDDDLDLKREHILAAVKACDAGRG CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCCC VIVLTDMFGGTPSNLVLSIRGSVPMEIVSGANLPMLIKLAEVREVLSLEEAAIAAAEGGR EEEEEECCCCCCCCEEEEECCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCC KYVTIASELLARLP EEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA