Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is melB [C]
Identifier: 114798723
GI number: 114798723
Start: 614791
End: 616302
Strand: Direct
Name: melB [C]
Synonym: HNE_0615
Alternate gene names: 114798723
Gene position: 614791-616302 (Clockwise)
Preceding gene: 114797799
Following gene: 114798362
Centisome position: 16.59
GC content: 61.84
Gene sequence:
>1512_bases ATGGCGTCGCCCGTCCTCCCTGCTTCTGGCGCCGCAGTTTGCGTGGCATCGGCGCCACGTCAAGCGAGGGCGCAGCTAAA AAATGACTTGGCCGTCACCTTCGCTCAAGGCAGTGTGCGCGCCATGTCCCAGTCCCCCACCAAGCGTTTGTCGTTCCCGC GAGTGCTCGCCTTTGCCTCGCTCAGCATTCCCATTGCCGGGGTCGGCCTGCCGCTGGGGGTCTACCTCGCGCCGCTCTAT GCCAATGAAGCGCCTCATGGGGTTGGCCTCGGTCTGGAGCTGACCGGGCTCCTCTTCATGCTGCTGCGCTTCTGGGACAT CTTCACCGATCCGATCATGGGCTACATGGTCGACCGCTACCGCACGCCGCTCGGGCGTGTGCGCCACTGGATCATCCTCT GTGTACCGATCCTCGGCATCTCCACCTTCTTTGTCTACATGCCGCCGGCCGGGGCAGGACCCGTCTACTTCATCGGCTGG ATGCTGCTGTTCTATGTCGGTTTCACGCTGCTCCAGACGTCACGCTCCTCCTGGGTGCCGGCCATTGCCAGCGATTATGA CGACCGCTCACGGCTGTTCCTCTGGCCAGAGATCGTATCGGTGTTTGCCATGCTGGCTTTGCTGGCTACGCCGCTGATCC TCTCCACGATTGGGGTGGAGGCAGACAGGTTCGGGCAGGTGGCCGTCATGGGCTGGGTGATGATTATCGCCCTGCCGATT GCGGTGGCGCTGTCGTGTTTCTTCGTGCCCGATCCGCCTTTGCGGGGGGAGTCCAAACAGGTTGAGAAATTCGAGCTGCG CCCGCTGCTGCAAGCCATTCGCGGGCCGATGTTCAGCCGCCTCCTGACGATTGAGCTGCTTGTATCGACGGCCATTTCAG TGACGGCCGCAAACTTCCTCTTCGTCGCCGAATATGCGTTTGGCGCCAATGACGCGCAGACCAGCCTGACGCTGATGCTG TTCTTCGTCATGGCCATCATCGCGCTGCCCTTCTGGCTCTGGCTGGCCAAGAAAACCGAAAAGCGGACCGCCTATTTCAT CGCCACCACCTTTTCCGGTATCGCCTTCATCGCCTTCATTCCGCTGGCGCCCTATGGCAATTTCACGACCTTCCTGATCG CCTCGCTGATTGCGGGCATCCCGTTCAGCGCGCCGATCTTCCTCGCCCGCGCGATGACGGCCGATGTCGTTGAATGGCAG GCCGCAGAGACCGGGGAAAACCGCGCCGGTAATTTCTATGCGCTGCTGACGAGCTTCAACAAAGTTGGCTCCAGCCTCGC CTTTGGTGTGGGCTATTTCATTGTTGGCCGGATCGCCGGTTTCCGCCCCGGCCAGGAAAATTCCGACGCGGCGATCTTTG GTCTTGTCATGGTGTTCGGTTTCCTGCCGGGTCTGCTCTACCTGCTCGCCGGTTTCCTGGCGCGCGGCTATCCGCTGACC CGCGCTGTGCAGGAAGAAACGGCCCGCAAGCTTGAGGGCCGGATAGAGGTCGCGCCCCCTCCGGTGATCTGA
Upstream 100 bases:
>100_bases GCCACCGACAGGGTCGGCCCCATAGCTCGCGGTACGGAACAGAACGACGGCAATGATGATGCCGATGATGGCGCCAAGGC CAACCAGTATATTGCGGATC
Downstream 100 bases:
>100_bases AGGGCGGTTATCTGAAACCTAGAAGCCACCGCCCTCGGCGAGCCATTCCTTTTCGTCCGGGGTGCTTTCGCGGCCGACCA CATCGTTGCGATGCGGGAAG
Product: major facilitator transporter
Products: Li (I) [Cytoplasm]; melibiose [Cytoplasm]; Na (I) [Cytoplasm]; melibiose [Cytoplasm]; Proton [Cytoplasm]; melibiose [Cytoplasm] [C]
Alternate protein names: Sugar Transporter; Facilitator Superfamily Protein; SodiumGalactoside Symporter Family Protein; Sugar Transporter Subfamily; Sugar Symporter; Melibiose Carrier Protein; Facilitator Superfamily Transporter; Na+/Melibiose Symporter And Related Transporter Protein; MelibioseSodium Symporter; Oligogalacturonide Transporter; Polysaccharide Deacetylase; SodiumGalactoside Symporter Protein; SugarCation Symporter; Glycoside/Pentoside/HexuronideCation Symporter GPH Family; Xylose-Proton Symporter; Facilitator Family Transporter; Facilitator Superfamily Permease; SodiumGlactoside Symporter Family Protein
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MASPVLPASGAAVCVASAPRQARAQLKNDLAVTFAQGSVRAMSQSPTKRLSFPRVLAFASLSIPIAGVGLPLGVYLAPLY ANEAPHGVGLGLELTGLLFMLLRFWDIFTDPIMGYMVDRYRTPLGRVRHWIILCVPILGISTFFVYMPPAGAGPVYFIGW MLLFYVGFTLLQTSRSSWVPAIASDYDDRSRLFLWPEIVSVFAMLALLATPLILSTIGVEADRFGQVAVMGWVMIIALPI AVALSCFFVPDPPLRGESKQVEKFELRPLLQAIRGPMFSRLLTIELLVSTAISVTAANFLFVAEYAFGANDAQTSLTLML FFVMAIIALPFWLWLAKKTEKRTAYFIATTFSGIAFIAFIPLAPYGNFTTFLIASLIAGIPFSAPIFLARAMTADVVEWQ AAETGENRAGNFYALLTSFNKVGSSLAFGVGYFIVGRIAGFRPGQENSDAAIFGLVMVFGFLPGLLYLLAGFLARGYPLT RAVQEETARKLEGRIEVAPPPVI
Sequences:
>Translated_503_residues MASPVLPASGAAVCVASAPRQARAQLKNDLAVTFAQGSVRAMSQSPTKRLSFPRVLAFASLSIPIAGVGLPLGVYLAPLY ANEAPHGVGLGLELTGLLFMLLRFWDIFTDPIMGYMVDRYRTPLGRVRHWIILCVPILGISTFFVYMPPAGAGPVYFIGW MLLFYVGFTLLQTSRSSWVPAIASDYDDRSRLFLWPEIVSVFAMLALLATPLILSTIGVEADRFGQVAVMGWVMIIALPI AVALSCFFVPDPPLRGESKQVEKFELRPLLQAIRGPMFSRLLTIELLVSTAISVTAANFLFVAEYAFGANDAQTSLTLML FFVMAIIALPFWLWLAKKTEKRTAYFIATTFSGIAFIAFIPLAPYGNFTTFLIASLIAGIPFSAPIFLARAMTADVVEWQ AAETGENRAGNFYALLTSFNKVGSSLAFGVGYFIVGRIAGFRPGQENSDAAIFGLVMVFGFLPGLLYLLAGFLARGYPLT RAVQEETARKLEGRIEVAPPPVI >Mature_502_residues ASPVLPASGAAVCVASAPRQARAQLKNDLAVTFAQGSVRAMSQSPTKRLSFPRVLAFASLSIPIAGVGLPLGVYLAPLYA NEAPHGVGLGLELTGLLFMLLRFWDIFTDPIMGYMVDRYRTPLGRVRHWIILCVPILGISTFFVYMPPAGAGPVYFIGWM LLFYVGFTLLQTSRSSWVPAIASDYDDRSRLFLWPEIVSVFAMLALLATPLILSTIGVEADRFGQVAVMGWVMIIALPIA VALSCFFVPDPPLRGESKQVEKFELRPLLQAIRGPMFSRLLTIELLVSTAISVTAANFLFVAEYAFGANDAQTSLTLMLF FVMAIIALPFWLWLAKKTEKRTAYFIATTFSGIAFIAFIPLAPYGNFTTFLIASLIAGIPFSAPIFLARAMTADVVEWQA AETGENRAGNFYALLTSFNKVGSSLAFGVGYFIVGRIAGFRPGQENSDAAIFGLVMVFGFLPGLLYLLAGFLARGYPLTR AVQEETARKLEGRIEVAPPPVI
Specific function: Responsible For Melibiose Transport. It Is Capable Of Using Hydrogen, Sodium, And Lithium Cations As Coupling Cations For Cotransport, Depending On The Particular Sugar Transported (Symport System). [C]
COG id: COG2211
COG function: function code G; Na+/melibiose symporter and related transporters
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42713696, Length=484, Percent_Identity=21.900826446281, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI211063479, Length=430, Percent_Identity=22.093023255814, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1790561, Length=435, Percent_Identity=22.2988505747126, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54738; Mature: 54607
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPVLPASGAAVCVASAPRQARAQLKNDLAVTFAQGSVRAMSQSPTKRLSFPRVLAFAS CCCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCHHHHHCCCHHHCCCHHHHHHHH LSIPIAGVGLPLGVYLAPLYANEAPHGVGLGLELTGLLFMLLRFWDIFTDPIMGYMVDRY HCCCEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPLGRVRHWIILCVPILGISTFFVYMPPAGAGPVYFIGWMLLFYVGFTLLQTSRSSWVP CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC AIASDYDDRSRLFLWPEIVSVFAMLALLATPLILSTIGVEADRFGQVAVMGWVMIIALPI HHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHH AVALSCFFVPDPPLRGESKQVEKFELRPLLQAIRGPMFSRLLTIELLVSTAISVTAANFL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH FVAEYAFGANDAQTSLTLMLFFVMAIIALPFWLWLAKKTEKRTAYFIATTFSGIAFIAFI HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH PLAPYGNFTTFLIASLIAGIPFSAPIFLARAMTADVVEWQAAETGENRAGNFYALLTSFN HCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH KVGSSLAFGVGYFIVGRIAGFRPGQENSDAAIFGLVMVFGFLPGLLYLLAGFLARGYPLT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RAVQEETARKLEGRIEVAPPPVI HHHHHHHHHHHCCEEECCCCCCC >Mature Secondary Structure ASPVLPASGAAVCVASAPRQARAQLKNDLAVTFAQGSVRAMSQSPTKRLSFPRVLAFAS CCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCHHHHHCCCHHHCCCHHHHHHHH LSIPIAGVGLPLGVYLAPLYANEAPHGVGLGLELTGLLFMLLRFWDIFTDPIMGYMVDRY HCCCEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPLGRVRHWIILCVPILGISTFFVYMPPAGAGPVYFIGWMLLFYVGFTLLQTSRSSWVP CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC AIASDYDDRSRLFLWPEIVSVFAMLALLATPLILSTIGVEADRFGQVAVMGWVMIIALPI HHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHH AVALSCFFVPDPPLRGESKQVEKFELRPLLQAIRGPMFSRLLTIELLVSTAISVTAANFL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH FVAEYAFGANDAQTSLTLMLFFVMAIIALPFWLWLAKKTEKRTAYFIATTFSGIAFIAFI HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH PLAPYGNFTTFLIASLIAGIPFSAPIFLARAMTADVVEWQAAETGENRAGNFYALLTSFN HCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH KVGSSLAFGVGYFIVGRIAGFRPGQENSDAAIFGLVMVFGFLPGLLYLLAGFLARGYPLT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RAVQEETARKLEGRIEVAPPPVI HHHHHHHHHHHCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Li (I) [Periplasm]; melibiose [Periplasm]; Na (I) [Periplasm]; melibiose [Periplasm]; Proton [Periplasm]; melibiose [Periplasm] [C]
Specific reaction: Li (I) [Periplasm] + melibiose [Periplasm] = Li (I) [Cytoplasm] + melibiose [Cytoplasm] Na (I) [Periplasm] + melibiose [Periplasm] = Na (I) [Cytoplasm] + melibiose [Cytoplasm] Proton [Periplasm] + melibiose [Periplasm] = Proton [Cytoplasm] + melibiose [Cy
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA