The gene/protein map for NC_008358 is currently unavailable.
Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114798695

Identifier: 114798695

GI number: 114798695

Start: 3331781

End: 3332644

Strand: Reverse

Name: 114798695

Synonym: HNE_3152

Alternate gene names: NA

Gene position: 3332644-3331781 (Counterclockwise)

Preceding gene: 114799753

Following gene: 114798274

Centisome position: 89.95

GC content: 57.64

Gene sequence:

>864_bases
ATGCCGAAAGCAACACTCGACGAGAAAACCTATAACTCATCGGCAGAGCGCTTTATCGAGCGCCCCTTCGTGCGCGACAC
GATCATGGCCCTAATCGTGATCAACGCCGTGGTGCTCGGTGTGCTGACGTATTCGGAGCAACTGCCCGCCTGGCTCGTTG
CGGCGCTGACCTTCATCGACATGGCTGTCACCTTCATCTTCGTTGCCGAGATTGTGCTGAAGCTTTACGTCTACCGCCTG
CAATTCTTCAAGCTCGGCTGGAACTGGTTCGACTTTATGGTTGTCGGGGTCTCAGTGATTCCGGGCGGGTCGACCTTCAA
TGTGCTGCGGGCGCTGCGTGTGTTGCGGCTGTTGCGGCTCCTGCATTTCATCCCGACCATGAAGCGGATCACCGAAGCCC
TCCTTACCGCCCTGCCTGGCATGGGCGCCATCCTCGCCATTCTCGGACTTGTCTTCTACGTCTCTGTCGTGATGGCGACG
TATCTGTTCAGCGGCTCTCAGAACACGGAGAATTTCAGCACGCTCGCGGCCTCTGCGCTCACCATGTTTGAAGTGCTGAC
CATGGAAGGCTGGAACGGCCATATGCGCGACCTGATGGAGGAGTACCCCTGGGCGTGGATGTTCTTTATCCCGTTCATTC
TCTTCACGGTCTGGGCGATCCTCAACCTCTTCACCGCCGTGATTGTGGACTCGCTTCAGGACAGCGCCCTGGAGAAGATG
CTCGATGCCGAAGAGAAAATCAGCGATGAGCTGGAAGAACAGGAAACCCATGAGGTTATCCGGCACAGGGAGCTGATGGC
GCTCATCAGCGAGCTGCGCGCGGAAGTTCAGGAGTTGAAACAGTCCAGATCCGGGCCGGGCTGA

Upstream 100 bases:

>100_bases
CTGCCAGCTGACCGGCATAATTTCTGCCACAATCCTTTTGCTTGATCCTGCGGGCGGGCAGGATAGTTTGCGCGCGCTGA
CTGACCGGAATGAGGGGACC

Downstream 100 bases:

>100_bases
TCAGCCCGCAAACGCTTTCTCGATCACGAATTCTGCCGGGGCGGCGTTTGAGCCCTCGGTAAGACCCGCTTTCAGCATAA
GGGCTTTCACGTCCTGGATC

Product: cation channel family protein

Products: NA

Alternate protein names: Cation Channel Family Protein; Voltage-Gated Sodium Channel Subunit; Cation Transporter Component; Transporter Cation Channel Family; Cation Transporter; K+ Transporter Kef-Type; Sodium Channel Na(V)BP; Cold Shock Protein

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MPKATLDEKTYNSSAERFIERPFVRDTIMALIVINAVVLGVLTYSEQLPAWLVAALTFIDMAVTFIFVAEIVLKLYVYRL
QFFKLGWNWFDFMVVGVSVIPGGSTFNVLRALRVLRLLRLLHFIPTMKRITEALLTALPGMGAILAILGLVFYVSVVMAT
YLFSGSQNTENFSTLAASALTMFEVLTMEGWNGHMRDLMEEYPWAWMFFIPFILFTVWAILNLFTAVIVDSLQDSALEKM
LDAEEKISDELEEQETHEVIRHRELMALISELRAEVQELKQSRSGPG

Sequences:

>Translated_287_residues
MPKATLDEKTYNSSAERFIERPFVRDTIMALIVINAVVLGVLTYSEQLPAWLVAALTFIDMAVTFIFVAEIVLKLYVYRL
QFFKLGWNWFDFMVVGVSVIPGGSTFNVLRALRVLRLLRLLHFIPTMKRITEALLTALPGMGAILAILGLVFYVSVVMAT
YLFSGSQNTENFSTLAASALTMFEVLTMEGWNGHMRDLMEEYPWAWMFFIPFILFTVWAILNLFTAVIVDSLQDSALEKM
LDAEEKISDELEEQETHEVIRHRELMALISELRAEVQELKQSRSGPG
>Mature_286_residues
PKATLDEKTYNSSAERFIERPFVRDTIMALIVINAVVLGVLTYSEQLPAWLVAALTFIDMAVTFIFVAEIVLKLYVYRLQ
FFKLGWNWFDFMVVGVSVIPGGSTFNVLRALRVLRLLRLLHFIPTMKRITEALLTALPGMGAILAILGLVFYVSVVMATY
LFSGSQNTENFSTLAASALTMFEVLTMEGWNGHMRDLMEEYPWAWMFFIPFILFTVWAILNLFTAVIVDSLQDSALEKML
DAEEKISDELEEQETHEVIRHRELMALISELRAEVQELKQSRSGPG

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI38505294, Length=248, Percent_Identity=28.6290322580645, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI38505286, Length=248, Percent_Identity=28.6290322580645, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI38505272, Length=248, Percent_Identity=28.6290322580645, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI38505276, Length=248, Percent_Identity=28.6290322580645, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI38505284, Length=248, Percent_Identity=28.6290322580645, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI38505282, Length=248, Percent_Identity=28.6290322580645, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI20070163, Length=248, Percent_Identity=28.6290322580645, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI53832011, Length=273, Percent_Identity=27.1062271062271, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI53832009, Length=273, Percent_Identity=27.1062271062271, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505290, Length=233, Percent_Identity=28.755364806867, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505288, Length=233, Percent_Identity=28.755364806867, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505274, Length=233, Percent_Identity=28.755364806867, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505278, Length=233, Percent_Identity=28.755364806867, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505268, Length=233, Percent_Identity=28.755364806867, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI38505280, Length=233, Percent_Identity=28.755364806867, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI38505270, Length=233, Percent_Identity=28.755364806867, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI38505292, Length=233, Percent_Identity=28.755364806867, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI21361077, Length=263, Percent_Identity=27.7566539923954, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI4502523, Length=281, Percent_Identity=27.7580071174377, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI51093859, Length=263, Percent_Identity=28.1368821292776, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI53832005, Length=283, Percent_Identity=26.1484098939929, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI115583677, Length=275, Percent_Identity=25.0909090909091, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI260166635, Length=275, Percent_Identity=25.0909090909091, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI260166633, Length=275, Percent_Identity=25.0909090909091, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI126362955, Length=275, Percent_Identity=25.0909090909091, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI126362949, Length=275, Percent_Identity=25.0909090909091, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI126362947, Length=275, Percent_Identity=25.0909090909091, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI187828880, Length=231, Percent_Identity=27.7056277056277, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI148536844, Length=231, Percent_Identity=27.7056277056277, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI291463273, Length=231, Percent_Identity=27.7056277056277, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI7657544, Length=267, Percent_Identity=25.8426966292135, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI295789135, Length=267, Percent_Identity=25.8426966292135, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI148536846, Length=231, Percent_Identity=27.7056277056277, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI187828892, Length=231, Percent_Identity=27.7056277056277, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI93141214, Length=275, Percent_Identity=25.0909090909091, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI93141212, Length=275, Percent_Identity=25.0909090909091, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI93141210, Length=275, Percent_Identity=25.0909090909091, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI4506813, Length=246, Percent_Identity=24.390243902439, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI110835710, Length=288, Percent_Identity=24.3055555555556, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI237512982, Length=244, Percent_Identity=26.6393442622951, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI150417969, Length=244, Percent_Identity=26.6393442622951, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI150417967, Length=244, Percent_Identity=26.6393442622951, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI30089970, Length=244, Percent_Identity=26.6393442622951, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI37622907, Length=244, Percent_Identity=26.6393442622951, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI310127608, Length=245, Percent_Identity=26.530612244898, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI310127606, Length=268, Percent_Identity=26.4925373134328, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI115583667, Length=231, Percent_Identity=23.8095238095238, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI93587342, Length=248, Percent_Identity=27.4193548387097, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI29789451, Length=290, Percent_Identity=24.1379310344828, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI264681418, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193794830, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788538, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788548, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788526, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788542, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI264681420, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI120433602, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788536, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788720, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788730, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788724, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788544, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788540, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI310127842, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI264681416, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788732, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193794832, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193788528, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI193794828, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI193788534, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI193788532, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI193788530, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI193788728, Length=252, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI110349767, Length=264, Percent_Identity=22.7272727272727, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI53832007, Length=249, Percent_Identity=23.2931726907631, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71986085, Length=270, Percent_Identity=27.4074074074074, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI25146601, Length=270, Percent_Identity=27.4074074074074, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71986069, Length=270, Percent_Identity=27.4074074074074, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71986080, Length=277, Percent_Identity=27.0758122743682, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI193210847, Length=243, Percent_Identity=27.1604938271605, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71995563, Length=243, Percent_Identity=27.1604938271605, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI25146674, Length=262, Percent_Identity=23.6641221374046, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI25146680, Length=253, Percent_Identity=23.7154150197628, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI212645731, Length=205, Percent_Identity=21.9512195121951, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI86562741, Length=205, Percent_Identity=21.9512195121951, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161077583, Length=266, Percent_Identity=25.187969924812, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI161077585, Length=283, Percent_Identity=23.321554770318, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI161077483, Length=261, Percent_Identity=24.5210727969349, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24642537, Length=270, Percent_Identity=24.0740740740741, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI116007172, Length=270, Percent_Identity=24.0740740740741, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI62473635, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI45554951, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI45554921, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI62473598, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI45554962, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI45554935, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI62473612, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI45554974, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI62473623, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24641459, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24584551, Length=256, Percent_Identity=24.609375, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19584591, Length=256, Percent_Identity=24.609375, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584549, Length=256, Percent_Identity=24.609375, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584554, Length=256, Percent_Identity=24.609375, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221329977, Length=272, Percent_Identity=22.7941176470588, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI116007170, Length=270, Percent_Identity=23.3333333333333, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32680; Mature: 32549

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PKATLDEKTYNSSAERFIERPFVRDTIMALIVINAVVLGVLTYSEQLPAWLVAALTFID
CCCCCCHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAVTFIFVAEIVLKLYVYRLQFFKLGWNWFDFMVVGVSVIPGGSTFNVLRALRVLRLLRL
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LHFIPTMKRITEALLTALPGMGAILAILGLVFYVSVVMATYLFSGSQNTENFSTLAASAL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TMFEVLTMEGWNGHMRDLMEEYPWAWMFFIPFILFTVWAILNLFTAVIVDSLQDSALEKM
HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDAEEKISDELEEQETHEVIRHRELMALISELRAEVQELKQSRSGPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA