Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114798630
Identifier: 114798630
GI number: 114798630
Start: 3495903
End: 3496433
Strand: Reverse
Name: 114798630
Synonym: HNE_3346
Alternate gene names: NA
Gene position: 3496433-3495903 (Counterclockwise)
Preceding gene: 114799859
Following gene: 114800286
Centisome position: 94.37
GC content: 58.38
Gene sequence:
>531_bases ATGTCCCGCTTCGATGAACTCGTCGCCACGGTCGAAATCTATCAAAATCTCGCGGAGGAGAACTACAACCGTATCCGGCG CCTCGCCGAAGAGGTTCGCTCCGGCCTGTGTGACTATCTCGGCGCCAGCGACGGCATCTGCGTGCATCTCGTTCCGCCGA CAGGCCAGTTTGAACCACGTTCCTATGGAGATCAGGCATTTTCCATTCCGCCGCGCGGCTTCCGGCCGCTTGGGCCGGTT TCCTTCGGCCTCGCAGTGCGTGTGACGAAAACGCATGACTGGCTGAGGTTGGCGATGCACTGCCGCAAGGCGGGCGACAG CTTCGTTGTTTCTATCGAGCAGGGGGCGGAATACGAGTTCCAGTTGCCTATCCGGGAGGAGGATTCAGGCCCGTTCAATT CCCATATCTTCGAGCACATCCAAGGCTGGTTCACGGAGAACATCGAGCGCTATCGAGAAGGCTCCTATGGCGCGCGGGCT ATCGGCTTCGATTTCTCCCAGCCTGAGTCCAAAATCGCATTCGATGTCTAA
Upstream 100 bases:
>100_bases ATGCCATTGGCGGCCGTGCGCAGGCCAGCTGCGTGATTGGCGTAGGCATTCATAGCCGCTAGGCTGGCTGCTGTCCCAAT TGCAGAACGAGGCCCGCCCC
Downstream 100 bases:
>100_bases GTATGGACTCAGGATAAAGAGATCCAGCCAACAGCCGGCCGGCTGAGTTCAAAATACGTATTCTCTCTCTTGGCGAGAAA ATTTATTTTGGATATTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSRFDELVATVEIYQNLAEENYNRIRRLAEEVRSGLCDYLGASDGICVHLVPPTGQFEPRSYGDQAFSIPPRGFRPLGPV SFGLAVRVTKTHDWLRLAMHCRKAGDSFVVSIEQGAEYEFQLPIREEDSGPFNSHIFEHIQGWFTENIERYREGSYGARA IGFDFSQPESKIAFDV
Sequences:
>Translated_176_residues MSRFDELVATVEIYQNLAEENYNRIRRLAEEVRSGLCDYLGASDGICVHLVPPTGQFEPRSYGDQAFSIPPRGFRPLGPV SFGLAVRVTKTHDWLRLAMHCRKAGDSFVVSIEQGAEYEFQLPIREEDSGPFNSHIFEHIQGWFTENIERYREGSYGARA IGFDFSQPESKIAFDV >Mature_175_residues SRFDELVATVEIYQNLAEENYNRIRRLAEEVRSGLCDYLGASDGICVHLVPPTGQFEPRSYGDQAFSIPPRGFRPLGPVS FGLAVRVTKTHDWLRLAMHCRKAGDSFVVSIEQGAEYEFQLPIREEDSGPFNSHIFEHIQGWFTENIERYREGSYGARAI GFDFSQPESKIAFDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20027; Mature: 19895
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFDELVATVEIYQNLAEENYNRIRRLAEEVRSGLCDYLGASDGICVHLVPPTGQFEPR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC SYGDQAFSIPPRGFRPLGPVSFGLAVRVTKTHDWLRLAMHCRKAGDSFVVSIEQGAEYEF CCCCCEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCEEE QLPIREEDSGPFNSHIFEHIQGWFTENIERYREGSYGARAIGFDFSQPESKIAFDV ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEECCC >Mature Secondary Structure SRFDELVATVEIYQNLAEENYNRIRRLAEEVRSGLCDYLGASDGICVHLVPPTGQFEPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC SYGDQAFSIPPRGFRPLGPVSFGLAVRVTKTHDWLRLAMHCRKAGDSFVVSIEQGAEYEF CCCCCEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCEEE QLPIREEDSGPFNSHIFEHIQGWFTENIERYREGSYGARAIGFDFSQPESKIAFDV ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA