| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798440
Identifier: 114798440
GI number: 114798440
Start: 1063614
End: 1064480
Strand: Reverse
Name: 114798440
Synonym: HNE_1055
Alternate gene names: NA
Gene position: 1064480-1063614 (Counterclockwise)
Preceding gene: 114797915
Following gene: 114797488
Centisome position: 28.73
GC content: 70.59
Gene sequence:
>867_bases GTGAGGGCTGAAACGCACGCCCTATCCCCCATCCCAACCCCCAAAAACCCCAACCCAATCAGCCCCCTCCCAAAAAAACA CCCCCAACTTATCCACCCCCTCGCGGCCCATGGCATTCTCTACGCCATGGATACCGCCCCTCAGCCCACGGATGACACCG AAGCGCTCGACGAGCTCGACACCCTGCTCGAGCGCGCGCGTCTCTTCATCCTGGATCTGATGATCTTCGTCGATGGCATC TTCGAACGCCTCGGCAGCGTGCCGCTGAGCGCCAAGCTCGCCCGCCGCCTCACCCGCCACGCCCTTCTCCCGGCTGAAAC CGCCCTGCGCCGCGCCATCCTCATTCTCGCCGCAGGCCTGCCCATGCCGGTCCTGCGCGCACCCCGCGCCGCGCCGGACA CGGCACCCCCGCGGGCCAGCACCGTCTCTCCCCAAGCCACTAAGCCCCGCCCACCCGCCTTCCGCATGAGCGAGCCCCCG CCGCGCGCCCGGAACGACGACACCACCCGTCCGGACACGGCCTATCTCCCCGAAGACCAGCTCCCGCGCATCCTCGCGCT GACAGACGCCGTGCTCTACGCCCCGCCGGCGCCGCCAAAACCGCTCCCCGGCCCCCGCGACCCCACCGCCATCTTCTGCC GCCGCTACGCCGCCCTGCAAGCCGCCTTCCACGACGCACAGGGAGAAGCCCGCCGCTGGGCCCGCCGCCGCGCCCGCGCC ATGGCCCGCGCCGGCGCCGGCACCCGCGCCCTCCCCCTCCCGCTGGCACTTCCCCGCCCGCGAAAATCCGCCAAACCCAC CGAAACCAATCTCCTCCGTGACCTGACAGACTCCACCAACACCTGCTTCGGCCACAACACCTCCTGA
Upstream 100 bases:
>100_bases TCAGAGACAAATCCCCATGGCAAACACAAAACGCTTGAAAGCGAACACAGTCGCTCTCCCGCTTGCGGGAGAGGAGGGGC CCATTGCGGCGCAATGGGAG
Downstream 100 bases:
>100_bases CGGCGGCCCGATCCGCCCTCCCCACCTCCCCCGCACCGCTGGGGAGGATAAGGGCGTTGCCCCAAACAAAAACCCCTCCG TCACCGGAGGGGTTTCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MRAETHALSPIPTPKNPNPISPLPKKHPQLIHPLAAHGILYAMDTAPQPTDDTEALDELDTLLERARLFILDLMIFVDGI FERLGSVPLSAKLARRLTRHALLPAETALRRAILILAAGLPMPVLRAPRAAPDTAPPRASTVSPQATKPRPPAFRMSEPP PRARNDDTTRPDTAYLPEDQLPRILALTDAVLYAPPAPPKPLPGPRDPTAIFCRRYAALQAAFHDAQGEARRWARRRARA MARAGAGTRALPLPLALPRPRKSAKPTETNLLRDLTDSTNTCFGHNTS
Sequences:
>Translated_288_residues MRAETHALSPIPTPKNPNPISPLPKKHPQLIHPLAAHGILYAMDTAPQPTDDTEALDELDTLLERARLFILDLMIFVDGI FERLGSVPLSAKLARRLTRHALLPAETALRRAILILAAGLPMPVLRAPRAAPDTAPPRASTVSPQATKPRPPAFRMSEPP PRARNDDTTRPDTAYLPEDQLPRILALTDAVLYAPPAPPKPLPGPRDPTAIFCRRYAALQAAFHDAQGEARRWARRRARA MARAGAGTRALPLPLALPRPRKSAKPTETNLLRDLTDSTNTCFGHNTS >Mature_288_residues MRAETHALSPIPTPKNPNPISPLPKKHPQLIHPLAAHGILYAMDTAPQPTDDTEALDELDTLLERARLFILDLMIFVDGI FERLGSVPLSAKLARRLTRHALLPAETALRRAILILAAGLPMPVLRAPRAAPDTAPPRASTVSPQATKPRPPAFRMSEPP PRARNDDTTRPDTAYLPEDQLPRILALTDAVLYAPPAPPKPLPGPRDPTAIFCRRYAALQAAFHDAQGEARRWARRRARA MARAGAGTRALPLPLALPRPRKSAKPTETNLLRDLTDSTNTCFGHNTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31480; Mature: 31480
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAETHALSPIPTPKNPNPISPLPKKHPQLIHPLAAHGILYAMDTAPQPTDDTEALDELD CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHH TLLERARLFILDLMIFVDGIFERLGSVPLSAKLARRLTRHALLPAETALRRAILILAAGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC PMPVLRAPRAAPDTAPPRASTVSPQATKPRPPAFRMSEPPPRARNDDTTRPDTAYLPEDQ CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LPRILALTDAVLYAPPAPPKPLPGPRDPTAIFCRRYAALQAAFHDAQGEARRWARRRARA CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH MARAGAGTRALPLPLALPRPRKSAKPTETNLLRDLTDSTNTCFGHNTS HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRAETHALSPIPTPKNPNPISPLPKKHPQLIHPLAAHGILYAMDTAPQPTDDTEALDELD CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHH TLLERARLFILDLMIFVDGIFERLGSVPLSAKLARRLTRHALLPAETALRRAILILAAGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC PMPVLRAPRAAPDTAPPRASTVSPQATKPRPPAFRMSEPPPRARNDDTTRPDTAYLPEDQ CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LPRILALTDAVLYAPPAPPKPLPGPRDPTAIFCRRYAALQAAFHDAQGEARRWARRRARA CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH MARAGAGTRALPLPLALPRPRKSAKPTETNLLRDLTDSTNTCFGHNTS HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA