| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798242
Identifier: 114798242
GI number: 114798242
Start: 2544749
End: 2545312
Strand: Direct
Name: 114798242
Synonym: HNE_2434
Alternate gene names: NA
Gene position: 2544749-2545312 (Clockwise)
Preceding gene: 114799729
Following gene: 114798127
Centisome position: 68.68
GC content: 55.67
Gene sequence:
>564_bases ATGTACGGAATGGTGCACACTGCAGCGCGTAGTATGGTTGTGGAAACCATGGGCGACGCGGCGTGGCGCAATGTCTTGAG CCAGGCAGACCTTGATGGCGAATACTTTATCAGTGGGCAGAACTACTCGGACAAGGTAACTTTCGCGCTTATTGATGCGA TCACCAAGGTTTCGGGCATTGAGACGCCAGATCTGCTCAGAAGTTTCGGCCAATACTGGATCGGCTATACCGCCAAGTCG TCTTACGGGACAATGTTCCGGGTAGGCGGCGACGAGTTGGAGAGCTTTCTCGCCAATCTCAACAGGATGCACGCCAGCAT ACACTCCACCATGCCCGCCTCCCGTATGCCGTCATTTGAATTTCTCCGTACCGAGAATGGCCGGATTGATGTGCTCTACA CTTCTGACCGCGACGGCCTGCTTCCTTTTGTCGAAGGGTTGCTGAAAGGCCTGATGGACCATTTCGGAGAGACAGGGCGC GTGACGCATGCGGTGACAGATGAAGGCGATGTATTTTCACTCCATTGCGACGCGCGGAACTCCGCTGCTCCGGGAGCCGC CTAG
Upstream 100 bases:
>100_bases CTTAATTCCGGCCTGACAATTACTGCCAGCTACTGAGGCTGCTGTTCGCCATTTTTGTATACAGCTTTTCTTTAAGGTAG AATTCTCAAGGCTTAATCGC
Downstream 100 bases:
>100_bases TGTCCTTCACCCTCAGCGATGATCATTTCAAACGTCTGTTTCCCGCCTTCATCCAGCTGGACCTGGCTGGCAATATCGTT TCGGTTGGCCCCTCATTGGA
Product: hypothetical protein
Products: 3',5'-cyclic GMP; diphosphate
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MYGMVHTAARSMVVETMGDAAWRNVLSQADLDGEYFISGQNYSDKVTFALIDAITKVSGIETPDLLRSFGQYWIGYTAKS SYGTMFRVGGDELESFLANLNRMHASIHSTMPASRMPSFEFLRTENGRIDVLYTSDRDGLLPFVEGLLKGLMDHFGETGR VTHAVTDEGDVFSLHCDARNSAAPGAA
Sequences:
>Translated_187_residues MYGMVHTAARSMVVETMGDAAWRNVLSQADLDGEYFISGQNYSDKVTFALIDAITKVSGIETPDLLRSFGQYWIGYTAKS SYGTMFRVGGDELESFLANLNRMHASIHSTMPASRMPSFEFLRTENGRIDVLYTSDRDGLLPFVEGLLKGLMDHFGETGR VTHAVTDEGDVFSLHCDARNSAAPGAA >Mature_187_residues MYGMVHTAARSMVVETMGDAAWRNVLSQADLDGEYFISGQNYSDKVTFALIDAITKVSGIETPDLLRSFGQYWIGYTAKS SYGTMFRVGGDELESFLANLNRMHASIHSTMPASRMPSFEFLRTENGRIDVLYTSDRDGLLPFVEGLLKGLMDHFGETGR VTHAVTDEGDVFSLHCDARNSAAPGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504215, Length=151, Percent_Identity=33.112582781457, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI86564713, Length=152, Percent_Identity=32.2368421052632, Blast_Score=85, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17561810, Length=152, Percent_Identity=28.2894736842105, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71990146, Length=153, Percent_Identity=26.797385620915, Blast_Score=70, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71995893, Length=171, Percent_Identity=23.3918128654971, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71995895, Length=171, Percent_Identity=23.3918128654971, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI24651577, Length=153, Percent_Identity=29.4117647058824, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI116008022, Length=171, Percent_Identity=22.8070175438596, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI116008024, Length=171, Percent_Identity=22.8070175438596, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI21355729, Length=171, Percent_Identity=21.6374269005848, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI116008008, Length=155, Percent_Identity=23.2258064516129, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.6.1.2
Molecular weight: Translated: 20534; Mature: 20534
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGMVHTAARSMVVETMGDAAWRNVLSQADLDGEYFISGQNYSDKVTFALIDAITKVSGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC ETPDLLRSFGQYWIGYTAKSSYGTMFRVGGDELESFLANLNRMHASIHSTMPASRMPSFE CCHHHHHHHHHHHHCEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHH FLRTENGRIDVLYTSDRDGLLPFVEGLLKGLMDHFGETGRVTHAVTDEGDVFSLHCDARN EEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCC SAAPGAA CCCCCCC >Mature Secondary Structure MYGMVHTAARSMVVETMGDAAWRNVLSQADLDGEYFISGQNYSDKVTFALIDAITKVSGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC ETPDLLRSFGQYWIGYTAKSSYGTMFRVGGDELESFLANLNRMHASIHSTMPASRMPSFE CCHHHHHHHHHHHHCEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHH FLRTENGRIDVLYTSDRDGLLPFVEGLLKGLMDHFGETGRVTHAVTDEGDVFSLHCDARN EEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCC SAAPGAA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP
Specific reaction: GTP = 3',5'-cyclic GMP + diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA