Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114798160
Identifier: 114798160
GI number: 114798160
Start: 244404
End: 246167
Strand: Direct
Name: 114798160
Synonym: HNE_0254
Alternate gene names: NA
Gene position: 244404-246167 (Clockwise)
Preceding gene: 114797426
Following gene: 114799934
Centisome position: 6.6
GC content: 59.47
Gene sequence:
>1764_bases ATGAGGCGTTACCTCTGGCTTCTCCTTTGTGGCGCGCTCCTGGCTCCGCCCGTCCTTGCCGCCAAACCGGAGGCAGAGAC GGCGGGGCCAGACGCGCGAAAGCAGGAGCTGTCGACCGAGCTCAACCAGTTTGTTCGCGATGCCATCGATGAGGGCCTTC TCGCGCCATCAGGATCGGGCGCCGCTGCCGAACCGATGGAGCCGTCTGCCGAAGTAGAGACCGTGGAGCGCGGCGTGGAT GCAGCGCCAACAGCACCGTCCGACGTCTGGGCGTTATCTGGCCCGATGGATTGCAATGCGCCTTACCCGCTCGACTTTTC AGAGTTCGAAGCCATCGCAAGCTATTCGGACATCCTGAACTACCGCACCCAGCTGATGGCGGACGGTGTTTCGGCGACAG ACGACCCTCGGTTGGCGAAGGCATACATTGCGCTCGACATGGCGTCTGAGGCGGTGATGAATCTCAGCGATCCAACCAAG CCGAATGAGCAGGCGCTGTATCATGTTGCGCAATTGCTCGACGGCCGTATCCGTCCGGATCTGACGTACTTTCAGGCACT CGCGCAGTGCCATGAGAAGGCCGAGCTGTGGCTCGGGATCGCTCTGCTGATTGATGGGCAAGGTACCGGCGCAGCTTATA TTGATAAGAGATTCAATGCCTTCCGCGAACTGCCATTGCAGTTGCGCACGAGTGTTACCGCAATCGCTGTTCCAGCTCTG GACCGCACTGATGGGCGGTTTCTGTCTCAGAAGATGCTGGCGTCCTTCGGCGAGGCGGAACTGCGCGATTCCGCTCAGCT CCAGTTTGCCAATGCCATCCTGGAAATGGGGCAGGGGAACACGCAGGCAGAGATCCTGATCCGCACTTTCCTTCTGCAAG GCCGGTTCCAGGAGGAAGCCCTCTTTGCACTGATAAGACATCACCGCGTCATCGATGCGCCCGTCAAAGCATTGCTGCTC GATGGCATGTTGTTCAAGATCGAACAGTCTCAGCGTGACGAAGATATTCGCGCGAGCATGAAGTTTGTGCTCGATGAGCT CAGCGCCGAGTCCCGCTATCTGACCATGATGGACATGGCCGGGCGCGACAACATGCAGAGCGAAGCGGCCCAAAGCGAAA TCCGGATTTATTTCGTGACCGGCCTGCAGCGCGATCTAGCAAGTGACGACCCGCTTCACAATCTGGCAGCCATTGAAGCG CTGTCGATCGAGGCCGGTCTTCTCGATCATCATGAGCAGCGTAAAGCGCTCTATGAGGCCGCGACCCTGAAGGCGGTGCG TCTTGGTTTCGCATCACTCGCCGACGAGCTTTCCCGGAAAACGCAGCCTGGTGAGGCCGTTGCCGAACAGCGCGCGACCC TTGCTTATCGTCTCAAGGATTATCCTGCCGTTTTCCAGCTAGCCGACGCCAATCCGTCGAACATCCAGATCGGATTGGTG GCCGCCCTCAGCGCTATTGACGCGAATGACGCCGCGCAGCTTCAACTCTTCACCTCCCGCCTCAAGCTTGATGATGCGAC GATCCTTGCACTGATTGAGCAGGACGCGGCCAGCCAGCGCTGGATCGTGCCCAACGCCGTCTATCAGGCAGCGGGGGCTA TAACAGACGAGGCAAGTAAAGCACGGGCAGACCGTGTTCTTGGCTTGAAGCAGGCCGCAGCCAGCGGCGTGGCTGAACCA TCACCGACCAGTATCGCCGGTGTTCCAGACCGCCTGATGACGACACGGATGGCACTGGATTCTCTCGAGGGAGGGAGCAA CTGA
Upstream 100 bases:
>100_bases TCAACATCTGTGTTGAGGTTGCCCGCCGTCAGGCGCCGGCGCGGGTCCGTCCGTCCTTTGATGAGGTCGAGCAAGCGGTT AGGGGGCTCAAGCAGGCAGC
Downstream 100 bases:
>100_bases TGTCGAGCCCCATTTACACGACACTCGCCCGCCAGCAGGGCCTGATGCAGGAAATGCAGGTCGTCGCGAACAATCTCGCA AATTCCAGCACGACCGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MRRYLWLLLCGALLAPPVLAAKPEAETAGPDARKQELSTELNQFVRDAIDEGLLAPSGSGAAAEPMEPSAEVETVERGVD AAPTAPSDVWALSGPMDCNAPYPLDFSEFEAIASYSDILNYRTQLMADGVSATDDPRLAKAYIALDMASEAVMNLSDPTK PNEQALYHVAQLLDGRIRPDLTYFQALAQCHEKAELWLGIALLIDGQGTGAAYIDKRFNAFRELPLQLRTSVTAIAVPAL DRTDGRFLSQKMLASFGEAELRDSAQLQFANAILEMGQGNTQAEILIRTFLLQGRFQEEALFALIRHHRVIDAPVKALLL DGMLFKIEQSQRDEDIRASMKFVLDELSAESRYLTMMDMAGRDNMQSEAAQSEIRIYFVTGLQRDLASDDPLHNLAAIEA LSIEAGLLDHHEQRKALYEAATLKAVRLGFASLADELSRKTQPGEAVAEQRATLAYRLKDYPAVFQLADANPSNIQIGLV AALSAIDANDAAQLQLFTSRLKLDDATILALIEQDAASQRWIVPNAVYQAAGAITDEASKARADRVLGLKQAAASGVAEP SPTSIAGVPDRLMTTRMALDSLEGGSN
Sequences:
>Translated_587_residues MRRYLWLLLCGALLAPPVLAAKPEAETAGPDARKQELSTELNQFVRDAIDEGLLAPSGSGAAAEPMEPSAEVETVERGVD AAPTAPSDVWALSGPMDCNAPYPLDFSEFEAIASYSDILNYRTQLMADGVSATDDPRLAKAYIALDMASEAVMNLSDPTK PNEQALYHVAQLLDGRIRPDLTYFQALAQCHEKAELWLGIALLIDGQGTGAAYIDKRFNAFRELPLQLRTSVTAIAVPAL DRTDGRFLSQKMLASFGEAELRDSAQLQFANAILEMGQGNTQAEILIRTFLLQGRFQEEALFALIRHHRVIDAPVKALLL DGMLFKIEQSQRDEDIRASMKFVLDELSAESRYLTMMDMAGRDNMQSEAAQSEIRIYFVTGLQRDLASDDPLHNLAAIEA LSIEAGLLDHHEQRKALYEAATLKAVRLGFASLADELSRKTQPGEAVAEQRATLAYRLKDYPAVFQLADANPSNIQIGLV AALSAIDANDAAQLQLFTSRLKLDDATILALIEQDAASQRWIVPNAVYQAAGAITDEASKARADRVLGLKQAAASGVAEP SPTSIAGVPDRLMTTRMALDSLEGGSN >Mature_587_residues MRRYLWLLLCGALLAPPVLAAKPEAETAGPDARKQELSTELNQFVRDAIDEGLLAPSGSGAAAEPMEPSAEVETVERGVD AAPTAPSDVWALSGPMDCNAPYPLDFSEFEAIASYSDILNYRTQLMADGVSATDDPRLAKAYIALDMASEAVMNLSDPTK PNEQALYHVAQLLDGRIRPDLTYFQALAQCHEKAELWLGIALLIDGQGTGAAYIDKRFNAFRELPLQLRTSVTAIAVPAL DRTDGRFLSQKMLASFGEAELRDSAQLQFANAILEMGQGNTQAEILIRTFLLQGRFQEEALFALIRHHRVIDAPVKALLL DGMLFKIEQSQRDEDIRASMKFVLDELSAESRYLTMMDMAGRDNMQSEAAQSEIRIYFVTGLQRDLASDDPLHNLAAIEA LSIEAGLLDHHEQRKALYEAATLKAVRLGFASLADELSRKTQPGEAVAEQRATLAYRLKDYPAVFQLADANPSNIQIGLV AALSAIDANDAAQLQLFTSRLKLDDATILALIEQDAASQRWIVPNAVYQAAGAITDEASKARADRVLGLKQAAASGVAEP SPTSIAGVPDRLMTTRMALDSLEGGSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63746; Mature: 63746
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRYLWLLLCGALLAPPVLAAKPEAETAGPDARKQELSTELNQFVRDAIDEGLLAPSGSG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AAAEPMEPSAEVETVERGVDAAPTAPSDVWALSGPMDCNAPYPLDFSEFEAIASYSDILN CCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH YRTQLMADGVSATDDPRLAKAYIALDMASEAVMNLSDPTKPNEQALYHVAQLLDGRIRPD HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC LTYFQALAQCHEKAELWLGIALLIDGQGTGAAYIDKRFNAFRELPLQLRTSVTAIAVPAL HHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHCHHEEEECCC DRTDGRFLSQKMLASFGEAELRDSAQLQFANAILEMGQGNTQAEILIRTFLLQGRFQEEA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH LFALIRHHRVIDAPVKALLLDGMLFKIEQSQRDEDIRASMKFVLDELSAESRYLTMMDMA HHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEHHC GRDNMQSEAAQSEIRIYFVTGLQRDLASDDPLHNLAAIEALSIEAGLLDHHEQRKALYEA CCCCHHHHHHHCCEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLKAVRLGFASLADELSRKTQPGEAVAEQRATLAYRLKDYPAVFQLADANPSNIQIGLV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEHHH AALSAIDANDAAQLQLFTSRLKLDDATILALIEQDAASQRWIVPNAVYQAAGAITDEASK HHHHHCCCCCHHHHHHHHHHHCCCCHHEEEEEHHCCCCCCCCCCHHHHHHHCCCCHHHHH ARADRVLGLKQAAASGVAEPSPTSIAGVPDRLMTTRMALDSLEGGSN HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRRYLWLLLCGALLAPPVLAAKPEAETAGPDARKQELSTELNQFVRDAIDEGLLAPSGSG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AAAEPMEPSAEVETVERGVDAAPTAPSDVWALSGPMDCNAPYPLDFSEFEAIASYSDILN CCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH YRTQLMADGVSATDDPRLAKAYIALDMASEAVMNLSDPTKPNEQALYHVAQLLDGRIRPD HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC LTYFQALAQCHEKAELWLGIALLIDGQGTGAAYIDKRFNAFRELPLQLRTSVTAIAVPAL HHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHCHHEEEECCC DRTDGRFLSQKMLASFGEAELRDSAQLQFANAILEMGQGNTQAEILIRTFLLQGRFQEEA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH LFALIRHHRVIDAPVKALLLDGMLFKIEQSQRDEDIRASMKFVLDELSAESRYLTMMDMA HHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEHHC GRDNMQSEAAQSEIRIYFVTGLQRDLASDDPLHNLAAIEALSIEAGLLDHHEQRKALYEA CCCCHHHHHHHCCEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLKAVRLGFASLADELSRKTQPGEAVAEQRATLAYRLKDYPAVFQLADANPSNIQIGLV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEHHH AALSAIDANDAAQLQLFTSRLKLDDATILALIEQDAASQRWIVPNAVYQAAGAITDEASK HHHHHCCCCCHHHHHHHHHHHCCCCHHEEEEEHHCCCCCCCCCCHHHHHHHCCCCHHHHH ARADRVLGLKQAAASGVAEPSPTSIAGVPDRLMTTRMALDSLEGGSN HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA