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The map label for this gene is ycjS [C]

Identifier: 114798051

GI number: 114798051

Start: 833040

End: 834020

Strand: Reverse

Name: ycjS [C]

Synonym: HNE_0812

Alternate gene names: 114798051

Gene position: 834020-833040 (Counterclockwise)

Preceding gene: 114800248

Following gene: 114800287

Centisome position: 22.51

GC content: 62.08

Gene sequence:

>981_bases
ATGATCAGGATTGGCATTCTGGGGGCAGCGAAAATCGCGCCCAAGGCCTTGATCCCACAGGTGAAACGCCGGGCGGATTG
CACCATTCTGGCGGTGGCGGCGCGCGATGCCATCAAGGCCCGCGCCTATGCCGATGCCCACGGCATTCCGGAAGTTGTGG
AAAGCTATGAAGCGTTGATCGCGCGGCCAGATATTGACCTCATCTACAACGCCCTGCCCCCGAACCGGCACGCAGACCTT
TCCATCGCGGCGCTGAAAGCGGGCAAACACGTGCTGTGTGAAAAGCCGTTTGCGATGAATGCCGGGGAAGCGCGCGCCAT
GGCGGACGCGGCCCAGCGCAGTGGCAGGCATCTGATCGAGGCATTTCACTATCGGTTTCATCCGATGTTCGAGGACATTC
TGGAGAAGGTGCGCAGCGGGGCCATTGGCAAGCTGTGTGCGATGAAGGCGGAGTTTTCGGTGCGGATTCCCTATTCGCCC
GAGGAGCTGCGCCACCGGCCGGACCTGGGCGGGGGCGCGCTGATGGATCTCGGCTGCTATCCCCTCCACTGGCTGCGCAC
GATTGCCGGCAGTGAGCCACGCCTTGTCTCAGCTCGCATGGAAGAAGGCACGCCGGGCGTGGACCTTGTGACGGAGGCGG
TGCTGGAATTTCCAGGCGGCATTCCAGCACGCCTGCGCACCAGCATGAAGCCGGGCCAGCCATACAAGGCGCTGATCGCC
CTGAAAGGCAGCGACGCCATACTGCGCGCGGTGAACCCGATCCATCCGACTTTCGGCAATTCGATCTCCTTCCAGCGTGG
CAGGAAGGTCACTCGTTATACCGTGGACGGAGAGACGACCTATGATTACCAGCTGGCGCATGTGATCGATGTGATCACCG
GACGCGCCGCGCCCCTCACAGGCGGCACGGATGCTGTGGCCAATATGACGATGATTGATGCGATCTATGAGGCGGGCGGC
CTGAAACCTCGCGGAACGTAA

Upstream 100 bases:

>100_bases
TTTTGGGTCACTCCTCAAGAAAGACGTTAAGCGGCGTTAGGCCGGGGTAAACAAAGCGCGTCGGTTTGTTTACCTGTTAC
CCGACATGGAGGGCTCTGGC

Downstream 100 bases:

>100_bases
TCTTGATCAGGCGGTTTCCTGCGCCAGTTCGATCCACTCTTCCACTTCATCTTCCTCCAGCGTCTCGCCGGGCCGCAGGA
CGCGGGAACCCGCCGATGTC

Product: NAD-binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MIRIGILGAAKIAPKALIPQVKRRADCTILAVAARDAIKARAYADAHGIPEVVESYEALIARPDIDLIYNALPPNRHADL
SIAALKAGKHVLCEKPFAMNAGEARAMADAAQRSGRHLIEAFHYRFHPMFEDILEKVRSGAIGKLCAMKAEFSVRIPYSP
EELRHRPDLGGGALMDLGCYPLHWLRTIAGSEPRLVSARMEEGTPGVDLVTEAVLEFPGGIPARLRTSMKPGQPYKALIA
LKGSDAILRAVNPIHPTFGNSISFQRGRKVTRYTVDGETTYDYQLAHVIDVITGRAAPLTGGTDAVANMTMIDAIYEAGG
LKPRGT

Sequences:

>Translated_326_residues
MIRIGILGAAKIAPKALIPQVKRRADCTILAVAARDAIKARAYADAHGIPEVVESYEALIARPDIDLIYNALPPNRHADL
SIAALKAGKHVLCEKPFAMNAGEARAMADAAQRSGRHLIEAFHYRFHPMFEDILEKVRSGAIGKLCAMKAEFSVRIPYSP
EELRHRPDLGGGALMDLGCYPLHWLRTIAGSEPRLVSARMEEGTPGVDLVTEAVLEFPGGIPARLRTSMKPGQPYKALIA
LKGSDAILRAVNPIHPTFGNSISFQRGRKVTRYTVDGETTYDYQLAHVIDVITGRAAPLTGGTDAVANMTMIDAIYEAGG
LKPRGT
>Mature_326_residues
MIRIGILGAAKIAPKALIPQVKRRADCTILAVAARDAIKARAYADAHGIPEVVESYEALIARPDIDLIYNALPPNRHADL
SIAALKAGKHVLCEKPFAMNAGEARAMADAAQRSGRHLIEAFHYRFHPMFEDILEKVRSGAIGKLCAMKAEFSVRIPYSP
EELRHRPDLGGGALMDLGCYPLHWLRTIAGSEPRLVSARMEEGTPGVDLVTEAVLEFPGGIPARLRTSMKPGQPYKALIA
LKGSDAILRAVNPIHPTFGNSISFQRGRKVTRYTVDGETTYDYQLAHVIDVITGRAAPLTGGTDAVANMTMIDAIYEAGG
LKPRGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=254, Percent_Identity=29.5275590551181, Blast_Score=111, Evalue=8e-25,
Organism=Escherichia coli, GI1787574, Length=190, Percent_Identity=32.1052631578947, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI87081947, Length=220, Percent_Identity=26.3636363636364, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI145693182, Length=237, Percent_Identity=25.7383966244726, Blast_Score=65, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581117, Length=258, Percent_Identity=31.7829457364341, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24581115, Length=184, Percent_Identity=26.0869565217391, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24584727, Length=242, Percent_Identity=24.3801652892562, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35294; Mature: 35294

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIGILGAAKIAPKALIPQVKRRADCTILAVAARDAIKARAYADAHGIPEVVESYEALI
CEEEEEECCHHHCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHH
ARPDIDLIYNALPPNRHADLSIAALKAGKHVLCEKPFAMNAGEARAMADAAQRSGRHLIE
CCCCHHHHEECCCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHH
AFHYRFHPMFEDILEKVRSGAIGKLCAMKAEFSVRIPYSPEELRHRPDLGGGALMDLGCY
HHHHHHCHHHHHHHHHHHCCCHHHHHEEECCEEEECCCCHHHHHCCCCCCCCCEECCCCC
PLHWLRTIAGSEPRLVSARMEEGTPGVDLVTEAVLEFPGGIPARLRTSMKPGQPYKALIA
HHHHHHHHCCCCCCEEEEEHHCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEE
LKGSDAILRAVNPIHPTFGNSISFQRGRKVTRYTVDGETTYDYQLAHVIDVITGRAAPLT
ECCCCHHHHHCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
GGTDAVANMTMIDAIYEAGGLKPRGT
CCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIRIGILGAAKIAPKALIPQVKRRADCTILAVAARDAIKARAYADAHGIPEVVESYEALI
CEEEEEECCHHHCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHH
ARPDIDLIYNALPPNRHADLSIAALKAGKHVLCEKPFAMNAGEARAMADAAQRSGRHLIE
CCCCHHHHEECCCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHH
AFHYRFHPMFEDILEKVRSGAIGKLCAMKAEFSVRIPYSPEELRHRPDLGGGALMDLGCY
HHHHHHCHHHHHHHHHHHCCCHHHHHEEECCEEEECCCCHHHHHCCCCCCCCCEECCCCC
PLHWLRTIAGSEPRLVSARMEEGTPGVDLVTEAVLEFPGGIPARLRTSMKPGQPYKALIA
HHHHHHHHCCCCCCEEEEEHHCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEE
LKGSDAILRAVNPIHPTFGNSISFQRGRKVTRYTVDGETTYDYQLAHVIDVITGRAAPLT
ECCCCHHHHHCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
GGTDAVANMTMIDAIYEAGGLKPRGT
CCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]