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The map label for this gene is ycdL [C]

Identifier: 114798038

GI number: 114798038

Start: 1123460

End: 1124131

Strand: Reverse

Name: ycdL [C]

Synonym: HNE_1116

Alternate gene names: 114798038

Gene position: 1124131-1123460 (Counterclockwise)

Preceding gene: 114799942

Following gene: 114797918

Centisome position: 30.34

GC content: 58.78

Gene sequence:

>672_bases
ATGATCCGGTCCGACAAGACGGCCCGCGAAATTTTTGAAGAAACACTGGCGAACCCGGCGCGCGCGAAATTCGGCTTTGG
CCAGAAGATCGCCATCGTGAATGTGGACCCGCAGAAAGCCTACACCCGGCCTGACCTGTATCCGAAGACGGCCTATATTA
CCGACCCCAACCAGGTGACCCATATAAATGACATCTCCAGCGCCGCGCGGAGCAAGGGCCTGCCCGTGGTCTGGACCCAT
GTTGCCTATATGGAGAATGCCGCCGATGCGGGCGTCTGGGGCACACGGACGAACACCCCCGATTCGCTGCAGAATATCAA
ATATGGCTCGGAGCGGCATGAATTCGACGACCGGCTCACAATCGATGAAAAGGTGGACGCCGTTTACACCAAGCGGATGC
CGAGCGCGTTTTTCGAAACGCCGCTGGCAAGTTTCCTCACCTGGCACCAGGCTGACACAGTGGTGATCACGGGCGGCTCG
ACGTCCGGCTGCATTCGCGCCACAGCTGTTGACGCCCTCAGCCGGGGTTACCGCGCCATCGTGCCGATTGAATGCGTGGC
CGACAAGCATGAGAGCTATCACTTTGCAAACCTGACCGACCTGCTCATCAAATACGCCGATGTCGTGCCGGTGGCGGAGG
TGAAAGCCTGGATCGAAGGATACAAGGGATGA

Upstream 100 bases:

>100_bases
GTCTGGCCATTGGCGCAAAGAAAAGGATATATCATTTGGAAATACCCCACCTGCCCAACAAGGATCATTGACCATGAGCG
GCTACCCCACCGAACCCACC

Downstream 100 bases:

>100_bases
CCCATTCCGATCCCAACCTCTATGATTTCTGGCCTTATGAGGGCCGGCCGAAGATCAGATGGCCCGGCGGGAAGAAGCTC
GCCTTCTGGATTGCGCCCAA

Product: isochorismatase family protein

Products: NA

Alternate protein names: N-carbamoylsarcosine amidohydrolase; CSHase [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MIRSDKTAREIFEETLANPARAKFGFGQKIAIVNVDPQKAYTRPDLYPKTAYITDPNQVTHINDISSAARSKGLPVVWTH
VAYMENAADAGVWGTRTNTPDSLQNIKYGSERHEFDDRLTIDEKVDAVYTKRMPSAFFETPLASFLTWHQADTVVITGGS
TSGCIRATAVDALSRGYRAIVPIECVADKHESYHFANLTDLLIKYADVVPVAEVKAWIEGYKG

Sequences:

>Translated_223_residues
MIRSDKTAREIFEETLANPARAKFGFGQKIAIVNVDPQKAYTRPDLYPKTAYITDPNQVTHINDISSAARSKGLPVVWTH
VAYMENAADAGVWGTRTNTPDSLQNIKYGSERHEFDDRLTIDEKVDAVYTKRMPSAFFETPLASFLTWHQADTVVITGGS
TSGCIRATAVDALSRGYRAIVPIECVADKHESYHFANLTDLLIKYADVVPVAEVKAWIEGYKG
>Mature_223_residues
MIRSDKTAREIFEETLANPARAKFGFGQKIAIVNVDPQKAYTRPDLYPKTAYITDPNQVTHINDISSAARSKGLPVVWTH
VAYMENAADAGVWGTRTNTPDSLQNIKYGSERHEFDDRLTIDEKVDAVYTKRMPSAFFETPLASFLTWHQADTVVITGGS
TSGCIRATAVDALSRGYRAIVPIECVADKHESYHFANLTDLLIKYADVVPVAEVKAWIEGYKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: =3.5.1.59 [H]

Molecular weight: Translated: 24773; Mature: 24773

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSDKTAREIFEETLANPARAKFGFGQKIAIVNVDPQKAYTRPDLYPKTAYITDPNQVT
CCCCCHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCHHHCCCCCCCCCEEEEECCCCEE
HINDISSAARSKGLPVVWTHVAYMENAADAGVWGTRTNTPDSLQNIKYGSERHEFDDRLT
EHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCCC
IDEKVDAVYTKRMPSAFFETPLASFLTWHQADTVVITGGSTSGCIRATAVDALSRGYRAI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEE
VPIECVADKHESYHFANLTDLLIKYADVVPVAEVKAWIEGYKG
EEHHHECCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MIRSDKTAREIFEETLANPARAKFGFGQKIAIVNVDPQKAYTRPDLYPKTAYITDPNQVT
CCCCCHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCHHHCCCCCCCCCEEEEECCCCEE
HINDISSAARSKGLPVVWTHVAYMENAADAGVWGTRTNTPDSLQNIKYGSERHEFDDRLT
EHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCCC
IDEKVDAVYTKRMPSAFFETPLASFLTWHQADTVVITGGSTSGCIRATAVDALSRGYRAI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEE
VPIECVADKHESYHFANLTDLLIKYADVVPVAEVKAWIEGYKG
EEHHHECCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1381445; 8913306 [H]