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The map label for this gene is yfbS [C]

Identifier: 114797876

GI number: 114797876

Start: 2447399

End: 2449246

Strand: Direct

Name: yfbS [C]

Synonym: HNE_2347

Alternate gene names: 114797876

Gene position: 2447399-2449246 (Clockwise)

Preceding gene: 114797998

Following gene: 114798430

Centisome position: 66.06

GC content: 60.88

Gene sequence:

>1848_bases
ATGACTCTGGAACAAGCAGGCATTTTTGCCATCCTAGCGATCACGGCGCTCCTTTTCATCTGGGGCCGCTGGCGCCATGA
TCTTGTAGCCCTTGGCGCGCTGATCGCCTGCGTTGTCGCCGGATTGGTTGACCCTGCCGCTGCCTTTTCCGGCTTCGGAA
ATCCGGCGGTCATAACCGTTGCTTCCGTTCTGATCCTCAGCTTCTCGCTTCAGACAACGGGCGTTGTCGACACACTCTCG
GCGAAGGTCTTGCCTTCCAGTTCCGGCAACACGGTGTCCATCATTGCCCTGTCTGCGCTGGCGGCCGGGCTTTCCGCTTT
CATGAACAATGTCGGCGCCCTTGCCTTGCTGATGCCGGTGGCGATCAAAACCGCCAGCCGTCTCGGCATATCGCCAGGGC
GTGTTCTTATGCCCGTTTCCTTCGCCTCGATCCTTGGCGGAATGACGACGCTTACCGGCACACCGCCAAACCTGATTGTC
GCCGGCTTCAGCGGCCAGGGCGACAGCAGCAGTTTCACGATGTTTGATTTCGCGCCGGTCGGGCTCGCGGTTACAGCTGC
CGGCCTCATCCTGATCGCACTCGCCTGGAAACTCGTGCCCGCAAGGGAGCGGACCACCCTCGCGAGCTTCGAAACGGCGC
CCTACATCATCGAAGCCCGCGTCAAGCAGGACTCTTCCATCATCGGCCAGTCCCTGCGCGACATAGAATACCAGCTGGAT
ACGACCGACGCCCAGATCGTCAGCCTGCTGCGGAATGATCGCCGTATCTCGGCGCCCAACCCCTACCGGGAAGTTCGCGC
AGATGATGTTCTGGTGATTGAAGCCGATCCGGACGCCATTGGCGACGCCCTCTCCAAACTTGGTCTTGTCCTCGACACCG
TTGCCAAGGCCGAGGAAAAGGCGGCGGAGGAAAAAGAACAGGCGAGAGACAACCCGGATGCACCCGGAAAAGAAGAGAAG
GCAACACAGGCGGAAAGCCGGCTCCAGTCGGGCGACGTGGTTCTCATGGAACTCGCCGTTCGCCCCAATGCCCTTCTTCT
GGGGCTCTCCATCAAGCTGATCGACCTGCGCCGTGAATTTGGCGTGAACCTGATTGCGCTTTCCAGGGACGGCAAGGATT
CGATGGCGCGCCTGAATTCCACGCCGATCCGTTCCGGAGATGTGCTGCTCGTTCAGGGCACCTCCGATGCCATTCTCGAA
TTTGCCAACCGGTATGGCTGCGTCCCGCTGGCCGAACGGGCACTCAAGATCCCGAACTCTCGCAAAGCCGTGCTGGCCGC
CGTCATCATGATACTTGCCATCTGCGGTGCCGCCTTCGGCCTCCTGCCCGCCGCCATCACGTTCGCCGCAGGTGTTCTGG
CGGTCGCGCTGTTCAAGGTCGTACCGTTGCGCAAGCTGTATGAGCCGATTGACTGGCCGGTGGTCGTTCTGTTGGGCGCG
CTTATTCCGGTGGCCGGGGCGATGTCCACGACCGGCGCTGCAGATCTCATCGCCCAGGGCCTCATCACCGCCTCGGGCGG
CAGCAACCCGGTCTACACAATGATCATTCTTCTGGTCGTTACGATGACGCTGTCAGACTTCATGAACAATGCTGCTACGG
CCGCCGTGATGTGCCCGATTGCGCTGGGCGCCGCGTCGCAGCTTGGTGTCAATCCGGATACGTATCTTATGGCGGTCGCC
ATCGGCGCATCCTGCGCATTCCTTACGCCCATAGGTCATCAGAACAATGCGCTCATCCTGGGGCCTGGCGGTTTCCGCTT
CGGCGACTACTGGCGCCTTGGCCTGCCCATGGAAGTGGTTGTGATTGTAGCCGCAACGCCAATGTTGCTGTGGGTATGGC
CGCTCTGA

Upstream 100 bases:

>100_bases
GCTGCTTACGCTGTGACACGGGCGCCAAATACCAGTGCCGGCATTGTCGATCGCATGCTATCCCGTCTGATCTGAATTTC
CACAGATCGGGCAGGCGCGA

Downstream 100 bases:

>100_bases
ATACTGCCTGACCCCGGTTTTTCTCGGAACCTTGAAAGGCCAGGCGCGTTTCCTTTTCATAGACCGACTGAATGGTCATT
ACACAAAGGAGACACCCATG

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 614

Protein sequence:

>615_residues
MTLEQAGIFAILAITALLFIWGRWRHDLVALGALIACVVAGLVDPAAAFSGFGNPAVITVASVLILSFSLQTTGVVDTLS
AKVLPSSSGNTVSIIALSALAAGLSAFMNNVGALALLMPVAIKTASRLGISPGRVLMPVSFASILGGMTTLTGTPPNLIV
AGFSGQGDSSSFTMFDFAPVGLAVTAAGLILIALAWKLVPARERTTLASFETAPYIIEARVKQDSSIIGQSLRDIEYQLD
TTDAQIVSLLRNDRRISAPNPYREVRADDVLVIEADPDAIGDALSKLGLVLDTVAKAEEKAAEEKEQARDNPDAPGKEEK
ATQAESRLQSGDVVLMELAVRPNALLLGLSIKLIDLRREFGVNLIALSRDGKDSMARLNSTPIRSGDVLLVQGTSDAILE
FANRYGCVPLAERALKIPNSRKAVLAAVIMILAICGAAFGLLPAAITFAAGVLAVALFKVVPLRKLYEPIDWPVVVLLGA
LIPVAGAMSTTGAADLIAQGLITASGGSNPVYTMIILLVVTMTLSDFMNNAATAAVMCPIALGAASQLGVNPDTYLMAVA
IGASCAFLTPIGHQNNALILGPGGFRFGDYWRLGLPMEVVVIVAATPMLLWVWPL

Sequences:

>Translated_615_residues
MTLEQAGIFAILAITALLFIWGRWRHDLVALGALIACVVAGLVDPAAAFSGFGNPAVITVASVLILSFSLQTTGVVDTLS
AKVLPSSSGNTVSIIALSALAAGLSAFMNNVGALALLMPVAIKTASRLGISPGRVLMPVSFASILGGMTTLTGTPPNLIV
AGFSGQGDSSSFTMFDFAPVGLAVTAAGLILIALAWKLVPARERTTLASFETAPYIIEARVKQDSSIIGQSLRDIEYQLD
TTDAQIVSLLRNDRRISAPNPYREVRADDVLVIEADPDAIGDALSKLGLVLDTVAKAEEKAAEEKEQARDNPDAPGKEEK
ATQAESRLQSGDVVLMELAVRPNALLLGLSIKLIDLRREFGVNLIALSRDGKDSMARLNSTPIRSGDVLLVQGTSDAILE
FANRYGCVPLAERALKIPNSRKAVLAAVIMILAICGAAFGLLPAAITFAAGVLAVALFKVVPLRKLYEPIDWPVVVLLGA
LIPVAGAMSTTGAADLIAQGLITASGGSNPVYTMIILLVVTMTLSDFMNNAATAAVMCPIALGAASQLGVNPDTYLMAVA
IGASCAFLTPIGHQNNALILGPGGFRFGDYWRLGLPMEVVVIVAATPMLLWVWPL
>Mature_614_residues
TLEQAGIFAILAITALLFIWGRWRHDLVALGALIACVVAGLVDPAAAFSGFGNPAVITVASVLILSFSLQTTGVVDTLSA
KVLPSSSGNTVSIIALSALAAGLSAFMNNVGALALLMPVAIKTASRLGISPGRVLMPVSFASILGGMTTLTGTPPNLIVA
GFSGQGDSSSFTMFDFAPVGLAVTAAGLILIALAWKLVPARERTTLASFETAPYIIEARVKQDSSIIGQSLRDIEYQLDT
TDAQIVSLLRNDRRISAPNPYREVRADDVLVIEADPDAIGDALSKLGLVLDTVAKAEEKAAEEKEQARDNPDAPGKEEKA
TQAESRLQSGDVVLMELAVRPNALLLGLSIKLIDLRREFGVNLIALSRDGKDSMARLNSTPIRSGDVLLVQGTSDAILEF
ANRYGCVPLAERALKIPNSRKAVLAAVIMILAICGAAFGLLPAAITFAAGVLAVALFKVVPLRKLYEPIDWPVVVLLGAL
IPVAGAMSTTGAADLIAQGLITASGGSNPVYTMIILLVVTMTLSDFMNNAATAAVMCPIALGAASQLGVNPDTYLMAVAI
GASCAFLTPIGHQNNALILGPGGFRFGDYWRLGLPMEVVVIVAATPMLLWVWPL

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=637, Percent_Identity=29.6703296703297, Blast_Score=241, Evalue=8e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 64260; Mature: 64129

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEQAGIFAILAITALLFIWGRWRHDLVALGALIACVVAGLVDPAAAFSGFGNPAVITV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHH
ASVLILSFSLQTTGVVDTLSAKVLPSSSGNTVSIIALSALAAGLSAFMNNVGALALLMPV
HHHHHHHHCCCCCCHHHHHHHEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
AIKTASRLGISPGRVLMPVSFASILGGMTTLTGTPPNLIVAGFSGQGDSSSFTMFDFAPV
HHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCHH
GLAVTAAGLILIALAWKLVPARERTTLASFETAPYIIEARVKQDSSIIGQSLRDIEYQLD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEHHCCCHHHHHHHHHHHHEEEC
TTDAQIVSLLRNDRRISAPNPYREVRADDVLVIEADPDAIGDALSKLGLVLDTVAKAEEK
CCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
AAEEKEQARDNPDAPGKEEKATQAESRLQSGDVVLMELAVRPNALLLGLSIKLIDLRREF
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEEEEEEHHHH
GVNLIALSRDGKDSMARLNSTPIRSGDVLLVQGTSDAILEFANRYGCVPLAERALKIPNS
CCEEEEEECCCCHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCCC
RKAVLAAVIMILAICGAAFGLLPAAITFAAGVLAVALFKVVPLRKLYEPIDWPVVVLLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LIPVAGAMSTTGAADLIAQGLITASGGSNPVYTMIILLVVTMTLSDFMNNAATAAVMCPI
HHHHHCCCCCCCHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ALGAASQLGVNPDTYLMAVAIGASCAFLTPIGHQNNALILGPGGFRFGDYWRLGLPMEVV
HHCCHHHCCCCCCCEEEEEHHCCCEEEEECCCCCCCEEEECCCCCCCCCEEEECCCHHHH
VIVAATPMLLWVWPL
HHEECCCEEEEEECC
>Mature Secondary Structure 
TLEQAGIFAILAITALLFIWGRWRHDLVALGALIACVVAGLVDPAAAFSGFGNPAVITV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHH
ASVLILSFSLQTTGVVDTLSAKVLPSSSGNTVSIIALSALAAGLSAFMNNVGALALLMPV
HHHHHHHHCCCCCCHHHHHHHEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
AIKTASRLGISPGRVLMPVSFASILGGMTTLTGTPPNLIVAGFSGQGDSSSFTMFDFAPV
HHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCHH
GLAVTAAGLILIALAWKLVPARERTTLASFETAPYIIEARVKQDSSIIGQSLRDIEYQLD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEHHCCCHHHHHHHHHHHHEEEC
TTDAQIVSLLRNDRRISAPNPYREVRADDVLVIEADPDAIGDALSKLGLVLDTVAKAEEK
CCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
AAEEKEQARDNPDAPGKEEKATQAESRLQSGDVVLMELAVRPNALLLGLSIKLIDLRREF
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEEEEEEHHHH
GVNLIALSRDGKDSMARLNSTPIRSGDVLLVQGTSDAILEFANRYGCVPLAERALKIPNS
CCEEEEEECCCCHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCCC
RKAVLAAVIMILAICGAAFGLLPAAITFAAGVLAVALFKVVPLRKLYEPIDWPVVVLLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LIPVAGAMSTTGAADLIAQGLITASGGSNPVYTMIILLVVTMTLSDFMNNAATAAVMCPI
HHHHHCCCCCCCHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ALGAASQLGVNPDTYLMAVAIGASCAFLTPIGHQNNALILGPGGFRFGDYWRLGLPMEVV
HHCCHHHCCCCCCCEEEEEHHCCCEEEEECCCCCCCEEEECCCCCCCCCEEEECCCHHHH
VIVAATPMLLWVWPL
HHEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]