| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797853
Identifier: 114797853
GI number: 114797853
Start: 1072317
End: 1073087
Strand: Reverse
Name: 114797853
Synonym: HNE_1064
Alternate gene names: NA
Gene position: 1073087-1072317 (Counterclockwise)
Preceding gene: 114798606
Following gene: 114800027
Centisome position: 28.96
GC content: 66.54
Gene sequence:
>771_bases ATGAGCCTCGGGCTCGGCCTTCTCTTCTTCATAACCGCCGCCCTCTACGCCTCAGTCGGCTTCGGCGGCGGCTCCACCTA CAATGCCCTTCTCGTTCTTCACGGTACGGACTACCGCATCCTTCCGGCCATCGCGCTGGTCTGCAACATACTTGTCGTCA CCGGCGGCGTCATCCGCTTCCATCTGACGAAACAGCTCAGCCTCCGGCGGCTGATGCCCTTCCTTATCACCTCCATCCCC GCCGCCTGGCTGGGCGGGCGCCTGCCCGTTCCGGAAACGGTGTTCGTCGGCCTGCTCGGCGCCGCGCTGCTGGTCTCGGG CCTCTACCTCGCCTTCGAGCGCGCGCCCCCCGAAACCGCGCCCCCCACCGGCGCCCCGCCGCCCGGCCTCATCAGCTACG CCACCGGCGCCGCCATCGGGCTTCTCTCAGGGCTCGTCGGCATTGGCGGGGGCATCTTCCTGGCGCCGGTCCTCTATTTT CTCGGATGGGGCACGCCCCGCCAGATCGCGGCAGCCAGCAGCCTGTTCATCCTCGTCAACTCAGTCTCGGGTCTTGCCGG CCAGGTAACGAAACTTCAGGATACGGATGTCCTGCACCTCGCCATGCCCTACTGGCCGCTCCTTCCCCTCGTCGTGATCG GCGGACAGATCGGCAGCTGGATGGCCAGCCAGAAACTCCAGCCCCGGATCGTCAAACGCCTCACGGCCGTCCTGCTGCTC TATGTGGCAGCAAGGCTCCTGTTCACACTGGCAGGCCAGCTCACGCCCTGA
Upstream 100 bases:
>100_bases ACATGCTGAAAGCCATCGATAAATCCATGGTCATCGAAGGCATCGAACTGCTGGAAAAATCCGGCGGCGCATCGGGCAGC TACCGGAAACCCGCCAGCGC
Downstream 100 bases:
>100_bases TACCTCCGGGCACCAGACGGCATCCAGGTGTCGCCGGAATGGCCCCGAAAGGGGGTGCCGGCCTCTTCAGCGCTGAGCGA AAATCCTGAAACCATACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSLGLGLLFFITAALYASVGFGGGSTYNALLVLHGTDYRILPAIALVCNILVVTGGVIRFHLTKQLSLRRLMPFLITSIP AAWLGGRLPVPETVFVGLLGAALLVSGLYLAFERAPPETAPPTGAPPPGLISYATGAAIGLLSGLVGIGGGIFLAPVLYF LGWGTPRQIAAASSLFILVNSVSGLAGQVTKLQDTDVLHLAMPYWPLLPLVVIGGQIGSWMASQKLQPRIVKRLTAVLLL YVAARLLFTLAGQLTP
Sequences:
>Translated_256_residues MSLGLGLLFFITAALYASVGFGGGSTYNALLVLHGTDYRILPAIALVCNILVVTGGVIRFHLTKQLSLRRLMPFLITSIP AAWLGGRLPVPETVFVGLLGAALLVSGLYLAFERAPPETAPPTGAPPPGLISYATGAAIGLLSGLVGIGGGIFLAPVLYF LGWGTPRQIAAASSLFILVNSVSGLAGQVTKLQDTDVLHLAMPYWPLLPLVVIGGQIGSWMASQKLQPRIVKRLTAVLLL YVAARLLFTLAGQLTP >Mature_255_residues SLGLGLLFFITAALYASVGFGGGSTYNALLVLHGTDYRILPAIALVCNILVVTGGVIRFHLTKQLSLRRLMPFLITSIPA AWLGGRLPVPETVFVGLLGAALLVSGLYLAFERAPPETAPPTGAPPPGLISYATGAAIGLLSGLVGIGGGIFLAPVLYFL GWGTPRQIAAASSLFILVNSVSGLAGQVTKLQDTDVLHLAMPYWPLLPLVVIGGQIGSWMASQKLQPRIVKRLTAVLLLY VAARLLFTLAGQLTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 26779; Mature: 26648
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGLGLLFFITAALYASVGFGGGSTYNALLVLHGTDYRILPAIALVCNILVVTGGVIRF CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHEE HLTKQLSLRRLMPFLITSIPAAWLGGRLPVPETVFVGLLGAALLVSGLYLAFERAPPETA HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPTGAPPPGLISYATGAAIGLLSGLVGIGGGIFLAPVLYFLGWGTPRQIAAASSLFILVN CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SVSGLAGQVTKLQDTDVLHLAMPYWPLLPLVVIGGQIGSWMASQKLQPRIVKRLTAVLLL HHCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHH YVAARLLFTLAGQLTP HHHHHHHHHHHHCCCC >Mature Secondary Structure SLGLGLLFFITAALYASVGFGGGSTYNALLVLHGTDYRILPAIALVCNILVVTGGVIRF CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHEE HLTKQLSLRRLMPFLITSIPAAWLGGRLPVPETVFVGLLGAALLVSGLYLAFERAPPETA HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPTGAPPPGLISYATGAAIGLLSGLVGIGGGIFLAPVLYFLGWGTPRQIAAASSLFILVN CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SVSGLAGQVTKLQDTDVLHLAMPYWPLLPLVVIGGQIGSWMASQKLQPRIVKRLTAVLLL HHCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHH YVAARLLFTLAGQLTP HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]