Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797704
Identifier: 114797704
GI number: 114797704
Start: 419937
End: 420983
Strand: Direct
Name: 114797704
Synonym: HNE_0423
Alternate gene names: NA
Gene position: 419937-420983 (Clockwise)
Preceding gene: 114799481
Following gene: 114799310
Centisome position: 11.33
GC content: 62.66
Gene sequence:
>1047_bases GTGCGTTCGCATTTGCAGTTGCTTCCAGCTTTTGTTGCATTGGACGGGCGCTTGTCGCGCCCCGTCATCGCCGCAACATA TCTGGTCAGCGTGCTTGTCTTCGTCGTCGCGCTGATTTTGCGGATCTGGCTTGATCCGTATCTGCCGCAGGGCTTTCCCT TCCTGACATTCTTTCCCGCGGTACTGATCAGCGGCTTTGCCTTTGGCGTCCGCCAGGGCGCGATGGTGGCCGTCCTGTCA GCCTTTGCCTCCTGGTATTATTTCATACCGCCCGTCGGGGTCGACTTCTCGATGGGAACCCTGCTCGCAATGGGTCTCTA CCTCTTCGTGGTCATCACCGAATTGACGCTCATCTCGCTGATGATGCGTGCTTACCGGGCCGAATCGGCGGCCCGAAACG AGACCGAACGCCTTGCCAGCCTGCAGGAAACAATGGCGCAGGAGCTGGACCATCGGCTGAAAAACATCTTCGCCACCATG AACGCGATCATCTCCCTGTCGCTGCGCGGCGTGTCCAGCCCCGAAGAACTGGCCTCCCGTCTCAAGGAGCGGGTCAGCGC GCTGGGCCGCTCAAACCTCCTGTTACGCGGGTTCCGGGACGGGGAAGAAGTTGCGCTCGACACGGTCATCGCCCAGGCAC TTGAGCCCTTCTCGATTGTGGGCACGGCGCGCTTCAGCGGCGTTGGCCCACGCGTGCCGCTCGGTGGGCAGACGCTGGTG GTGCTGGGCCTCATTCTGCATGAGCTGGGCACCAACGCGGCCAAGTATGGCGCGCTCAGCGTGCCCACAGGCCGGATCAC GCTAAGCTGGCACATGACGCCCGGCCTGGCGGATGAGGGCGAACAGCTCCGGATCGAATGGCGCGAAACCGGCGGCCCTG TGCCCGCGCCGCCCCCAACAGCCTCCAGAGGTTTTGGATCAACCCTCATGAGCCGGGTGATTACCAGCGTGGGCGGGCAA ACGGAAATCGACTATCCGCCGGAAGGCGCCATTGTCCGCATGACCTTGCCCGCAGACATGCTCAACCAGATCACCCCCGC AGACTGA
Upstream 100 bases:
>100_bases CCCGCCAAAGTGGCTGAATTCAAAGGACTGTCTCGCGTGAGTTGCGTGAGGTCAACGGTTACACTACTCAATTGAGCCTT GGTTCTGGCAAGACGGTATC
Downstream 100 bases:
>100_bases GTCTGCCAAGGCACGCCGCGCGATCTTACATGCCTGAGCGGCCCACCACTTCAGCACATGCCGCAATGAGCCGTGCCATA TCCTGATCCCGCGACAGGCG
Product: putative sensor histidine kinase
Products: NA
Alternate protein names: EL360-LOV-histidine kinase; EL360-LOV-HK [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MRSHLQLLPAFVALDGRLSRPVIAATYLVSVLVFVVALILRIWLDPYLPQGFPFLTFFPAVLISGFAFGVRQGAMVAVLS AFASWYYFIPPVGVDFSMGTLLAMGLYLFVVITELTLISLMMRAYRAESAARNETERLASLQETMAQELDHRLKNIFATM NAIISLSLRGVSSPEELASRLKERVSALGRSNLLLRGFRDGEEVALDTVIAQALEPFSIVGTARFSGVGPRVPLGGQTLV VLGLILHELGTNAAKYGALSVPTGRITLSWHMTPGLADEGEQLRIEWRETGGPVPAPPPTASRGFGSTLMSRVITSVGGQ TEIDYPPEGAIVRMTLPADMLNQITPAD
Sequences:
>Translated_348_residues MRSHLQLLPAFVALDGRLSRPVIAATYLVSVLVFVVALILRIWLDPYLPQGFPFLTFFPAVLISGFAFGVRQGAMVAVLS AFASWYYFIPPVGVDFSMGTLLAMGLYLFVVITELTLISLMMRAYRAESAARNETERLASLQETMAQELDHRLKNIFATM NAIISLSLRGVSSPEELASRLKERVSALGRSNLLLRGFRDGEEVALDTVIAQALEPFSIVGTARFSGVGPRVPLGGQTLV VLGLILHELGTNAAKYGALSVPTGRITLSWHMTPGLADEGEQLRIEWRETGGPVPAPPPTASRGFGSTLMSRVITSVGGQ TEIDYPPEGAIVRMTLPADMLNQITPAD >Mature_348_residues MRSHLQLLPAFVALDGRLSRPVIAATYLVSVLVFVVALILRIWLDPYLPQGFPFLTFFPAVLISGFAFGVRQGAMVAVLS AFASWYYFIPPVGVDFSMGTLLAMGLYLFVVITELTLISLMMRAYRAESAARNETERLASLQETMAQELDHRLKNIFATM NAIISLSLRGVSSPEELASRLKERVSALGRSNLLLRGFRDGEEVALDTVIAQALEPFSIVGTARFSGVGPRVPLGGQTLV VLGLILHELGTNAAKYGALSVPTGRITLSWHMTPGLADEGEQLRIEWRETGGPVPAPPPTASRGFGSTLMSRVITSVGGQ TEIDYPPEGAIVRMTLPADMLNQITPAD
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG3920
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 37688; Mature: 37688
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSHLQLLPAFVALDGRLSRPVIAATYLVSVLVFVVALILRIWLDPYLPQGFPFLTFFPA CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH VLISGFAFGVRQGAMVAVLSAFASWYYFIPPVGVDFSMGTLLAMGLYLFVVITELTLISL HHHHHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MMRAYRAESAARNETERLASLQETMAQELDHRLKNIFATMNAIISLSLRGVSSPEELASR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LKERVSALGRSNLLLRGFRDGEEVALDTVIAQALEPFSIVGTARFSGVGPRVPLGGQTLV HHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHEEHHHHCCCCCCCCCCCHHHH VLGLILHELGTNAAKYGALSVPTGRITLSWHMTPGLADEGEQLRIEWRETGGPVPAPPPT HHHHHHHHHCCCHHHCCCEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC ASRGFGSTLMSRVITSVGGQTEIDYPPEGAIVRMTLPADMLNQITPAD CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCC >Mature Secondary Structure MRSHLQLLPAFVALDGRLSRPVIAATYLVSVLVFVVALILRIWLDPYLPQGFPFLTFFPA CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH VLISGFAFGVRQGAMVAVLSAFASWYYFIPPVGVDFSMGTLLAMGLYLFVVITELTLISL HHHHHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MMRAYRAESAARNETERLASLQETMAQELDHRLKNIFATMNAIISLSLRGVSSPEELASR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LKERVSALGRSNLLLRGFRDGEEVALDTVIAQALEPFSIVGTARFSGVGPRVPLGGQTLV HHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHEEHHHHCCCCCCCCCCCHHHH VLGLILHELGTNAAKYGALSVPTGRITLSWHMTPGLADEGEQLRIEWRETGGPVPAPPPT HHHHHHHHHCCCHHHCCCEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC ASRGFGSTLMSRVITSVGGQTEIDYPPEGAIVRMTLPADMLNQITPAD CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA