| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797597
Identifier: 114797597
GI number: 114797597
Start: 979736
End: 981010
Strand: Reverse
Name: 114797597
Synonym: HNE_0966
Alternate gene names: NA
Gene position: 981010-979736 (Counterclockwise)
Preceding gene: 114797659
Following gene: 114800457
Centisome position: 26.48
GC content: 61.49
Gene sequence:
>1275_bases ATGAGCCCGACAAACCGGACTTCCCTGGCAATTGTCGGCGCTGGCCCGGCGGGCCTGACGCTCACCCAGTATCTCAAGCT CACAGGCTATTCACAGGTCACCCTGATCGAACAGGCCGCGCGCATCGGCGGAAAATCAGACAGCATGGACCTTGGCGACC TGATCGCCGAGATGGGAACGTGCTATGCAACCGGCGCCTACAAGGACGTGCTGAAATGGATGCGCCGCCAGCGCAAACCC TTCCGTATGCTCCGGCGCACCACGGTCGATGGCGCCGGCATGCGCGACTATGTCAACGCCGCGCCCGGCCCGTCCCTGCC CCAGCAGGTGATGACGTATCTGGCAAAGCGCCAGGCCCTGCTCGGCCGTCTGAAGAAGAACCCGGATGATCCGCGCGCCC TCGCCGAAGCCGCCATGTCGGCCGAGGCCTGGCTGAGCGAGAACAAGCTGCCGAAGATCATGCGGATGATGTACCGCGCG GTCACGGCGCTGGGCTATGGATACCTGCATGAAGTGTCGATCTATCAGGCGATGCTTTGGGTGGACCATCACGCCATCAT CAGCGGCGCCACCGGCAAGCTGATCATGCCGTCTCAGGGGTGGTCGAATTTCTGGGAAGTTCTGGCGGAAGATTTCGATA TCCGCCTCTCTCATCAGATCACGAAGATCGAACGCGCGCCGAAAGAAACGCTTCTGCATTTCGAGGATGGTCAGCACCTG TCTGCAAAGGCGGTGGCCTGCACCATTCCGATGGATGACTGGTCACGCCTCGTCACTGATCCGACAACGGATGAACGCGC TGTTGCCGATGCCGTCACATGGAAAGGCTATGCCACCTCGCTGATCGTGGTGGAGAACTGGTTTACCGAAGAAGACATCC GCTCCTTCTCCAAGGCGTTCCTGCCGGGCTCCTATCCCGGCCAGCTGATCTCGGCGCGCTATGAGGGGCACAGCCCGGAC TTTGGCGGCCACCTCTATGTCACCGGCCAGATCCCCGGCGACTATACCGTGCCGGAACTGCGCATCTTTCTGGAACGCGA TCTCGCCGATCTCGGCGCCCGGCTGGTCAACGTGGTGAACGTCAAGAACTGGCGCTATTTCCCCCACCTCAATCTCAAGG CCCTCGAAAACGGCCTGATCGGCCGGATGCAGGCGATGCAGGGGCAGAGCCAGTCCTGGTATTCCGGCGCGATCTTCTCC CATGAATCGGTCGCCAACATCTCCCGCTTCAACAAGGCGCTCACCCCGCAATTGCTGGCCAGCCTGAAGCGCTGA
Upstream 100 bases:
>100_bases CGACATCTTCATGCGACCGTTACTAACAGGACATGATGAAGATGGGTTTTTACCGAACCGTGTGACCTTCACGGTCGCGT TAACCAAAGAATAACTCTCT
Downstream 100 bases:
>100_bases GCCCTCAGGCCCTGCATAACTGCCCGCCATGGCGGCGCTTTCATTGCATCTTTGCATAAATGTTATTGCCGGATCCCCGG ATCAATAACGCCCCCGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSPTNRTSLAIVGAGPAGLTLTQYLKLTGYSQVTLIEQAARIGGKSDSMDLGDLIAEMGTCYATGAYKDVLKWMRRQRKP FRMLRRTTVDGAGMRDYVNAAPGPSLPQQVMTYLAKRQALLGRLKKNPDDPRALAEAAMSAEAWLSENKLPKIMRMMYRA VTALGYGYLHEVSIYQAMLWVDHHAIISGATGKLIMPSQGWSNFWEVLAEDFDIRLSHQITKIERAPKETLLHFEDGQHL SAKAVACTIPMDDWSRLVTDPTTDERAVADAVTWKGYATSLIVVENWFTEEDIRSFSKAFLPGSYPGQLISARYEGHSPD FGGHLYVTGQIPGDYTVPELRIFLERDLADLGARLVNVVNVKNWRYFPHLNLKALENGLIGRMQAMQGQSQSWYSGAIFS HESVANISRFNKALTPQLLASLKR
Sequences:
>Translated_424_residues MSPTNRTSLAIVGAGPAGLTLTQYLKLTGYSQVTLIEQAARIGGKSDSMDLGDLIAEMGTCYATGAYKDVLKWMRRQRKP FRMLRRTTVDGAGMRDYVNAAPGPSLPQQVMTYLAKRQALLGRLKKNPDDPRALAEAAMSAEAWLSENKLPKIMRMMYRA VTALGYGYLHEVSIYQAMLWVDHHAIISGATGKLIMPSQGWSNFWEVLAEDFDIRLSHQITKIERAPKETLLHFEDGQHL SAKAVACTIPMDDWSRLVTDPTTDERAVADAVTWKGYATSLIVVENWFTEEDIRSFSKAFLPGSYPGQLISARYEGHSPD FGGHLYVTGQIPGDYTVPELRIFLERDLADLGARLVNVVNVKNWRYFPHLNLKALENGLIGRMQAMQGQSQSWYSGAIFS HESVANISRFNKALTPQLLASLKR >Mature_423_residues SPTNRTSLAIVGAGPAGLTLTQYLKLTGYSQVTLIEQAARIGGKSDSMDLGDLIAEMGTCYATGAYKDVLKWMRRQRKPF RMLRRTTVDGAGMRDYVNAAPGPSLPQQVMTYLAKRQALLGRLKKNPDDPRALAEAAMSAEAWLSENKLPKIMRMMYRAV TALGYGYLHEVSIYQAMLWVDHHAIISGATGKLIMPSQGWSNFWEVLAEDFDIRLSHQITKIERAPKETLLHFEDGQHLS AKAVACTIPMDDWSRLVTDPTTDERAVADAVTWKGYATSLIVVENWFTEEDIRSFSKAFLPGSYPGQLISARYEGHSPDF GGHLYVTGQIPGDYTVPELRIFLERDLADLGARLVNVVNVKNWRYFPHLNLKALENGLIGRMQAMQGQSQSWYSGAIFSH ESVANISRFNKALTPQLLASLKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47321; Mature: 47190
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTNRTSLAIVGAGPAGLTLTQYLKLTGYSQVTLIEQAARIGGKSDSMDLGDLIAEMGT CCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCC CYATGAYKDVLKWMRRQRKPFRMLRRTTVDGAGMRDYVNAAPGPSLPQQVMTYLAKRQAL CEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHH LGRLKKNPDDPRALAEAAMSAEAWLSENKLPKIMRMMYRAVTALGYGYLHEVSIYQAMLW HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDHHAIISGATGKLIMPSQGWSNFWEVLAEDFDIRLSHQITKIERAPKETLLHFEDGQHL HHHHHHEECCCCCEEECCCCHHHHHHHHHHCCCEEHHHHHHHHHHCCHHHEEEECCCCCE SAKAVACTIPMDDWSRLVTDPTTDERAVADAVTWKGYATSLIVVENWFTEEDIRSFSKAF ECCEEEEEECHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHC LPGSYPGQLISARYEGHSPDFGGHLYVTGQIPGDYTVPELRIFLERDLADLGARLVNVVN CCCCCCCHHHEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC VKNWRYFPHLNLKALENGLIGRMQAMQGQSQSWYSGAIFSHESVANISRFNKALTPQLLA CCCEEECCCCCHHHHHCCHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHCCHHHHH SLKR HHCC >Mature Secondary Structure SPTNRTSLAIVGAGPAGLTLTQYLKLTGYSQVTLIEQAARIGGKSDSMDLGDLIAEMGT CCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCC CYATGAYKDVLKWMRRQRKPFRMLRRTTVDGAGMRDYVNAAPGPSLPQQVMTYLAKRQAL CEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHH LGRLKKNPDDPRALAEAAMSAEAWLSENKLPKIMRMMYRAVTALGYGYLHEVSIYQAMLW HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDHHAIISGATGKLIMPSQGWSNFWEVLAEDFDIRLSHQITKIERAPKETLLHFEDGQHL HHHHHHEECCCCCEEECCCCHHHHHHHHHHCCCEEHHHHHHHHHHCCHHHEEEECCCCCE SAKAVACTIPMDDWSRLVTDPTTDERAVADAVTWKGYATSLIVVENWFTEEDIRSFSKAF ECCEEEEEECHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHC LPGSYPGQLISARYEGHSPDFGGHLYVTGQIPGDYTVPELRIFLERDLADLGARLVNVVN CCCCCCCHHHEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC VKNWRYFPHLNLKALENGLIGRMQAMQGQSQSWYSGAIFSHESVANISRFNKALTPQLLA CCCEEECCCCCHHHHHCCHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHCCHHHHH SLKR HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA