| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797508
Identifier: 114797508
GI number: 114797508
Start: 116868
End: 117692
Strand: Direct
Name: 114797508
Synonym: HNE_0131
Alternate gene names: NA
Gene position: 116868-117692 (Clockwise)
Preceding gene: 114798229
Following gene: 114798071
Centisome position: 3.15
GC content: 59.39
Gene sequence:
>825_bases ATGACAACACCGTTGCCAAAAGAATATCTGGCCAAGGCGCGCTCCGAGACCTGGGTAAACTTCTCCATTCTCCGGCATGG CGCGTTTGATGGCTTTCTTGTCACGTCGAAGAATTCCGGCACGCACTGGATGATGTACATGCTGTCGGTGGCACTTGCCG ATTCGTATGGCATTGAGCGGCCGAAGTATTATTCGGAGAATGCGTTGCGGCCGTATATCGGCTTTCCAACAGACAAGCCG GTCTATCCGCAATTGCCGCGCCTGGCGCGTAGCCATACCATTCCGCACCGTCTGGCAGACTGGGACTGGGCGCGGCGTCT CGCGGGACTGCCCAATTACGTCCTCGGTATCCGTCACCCGATGGCGATCCTGGCCTCCCACCATGCCAAATGGGAGTATG ACATCCAGGTGAGCTGGCTGGATTATCTCAAGGGCGATCCGGGCGGGGCCCGCTTCCGGTGTGATCTTTACTGGCTGGCG CGCTTCTGGAACCGCTGGGGAGAGATTGAGGCGGCCTATCCTGAGACGATCCTCAAGGTTCAGTATGAAGAGACCCAGCG CAATCCGCGCGCGACGCTGGAAGCGATTGCAGCCCATTGGGGCATCGCGCTGACGCCTGAAGCGATCAAGGCCGCGCTGT TTGCCGGCACCAAGGAAGAGATGGCCAAGAAGGCCGATCCGGACGGCGAGCCAAACGTGCTGCAGAACCGCAAGCAGTCA CTGGCCGAGCTGTTTACCGGTGAGGCGATGGACATTTATACGGCGCATATCCGCACGCTGTTCCGGCATGATCTGGGGTA TGACCTGCTCACGCCTCCGGCTTGA
Upstream 100 bases:
>100_bases TACCGGGACATGGCCGGGCTCAAGACCTAGGGCGCAGCCGCTTTAAGGTTGCGGGGATTGCCTGTTGCATCAGGACTCCT GGGCTCTATGTCTTTTCGTC
Downstream 100 bases:
>100_bases GATAACCGCTGGAGCGGCCTTCCGGGCCATAGCTGATCCACCAGGGCTCCGCAGCAGCCTGGGCCTCCAGTTCCGTGAAC AGAGGATCTTCCAGGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTTPLPKEYLAKARSETWVNFSILRHGAFDGFLVTSKNSGTHWMMYMLSVALADSYGIERPKYYSENALRPYIGFPTDKP VYPQLPRLARSHTIPHRLADWDWARRLAGLPNYVLGIRHPMAILASHHAKWEYDIQVSWLDYLKGDPGGARFRCDLYWLA RFWNRWGEIEAAYPETILKVQYEETQRNPRATLEAIAAHWGIALTPEAIKAALFAGTKEEMAKKADPDGEPNVLQNRKQS LAELFTGEAMDIYTAHIRTLFRHDLGYDLLTPPA
Sequences:
>Translated_274_residues MTTPLPKEYLAKARSETWVNFSILRHGAFDGFLVTSKNSGTHWMMYMLSVALADSYGIERPKYYSENALRPYIGFPTDKP VYPQLPRLARSHTIPHRLADWDWARRLAGLPNYVLGIRHPMAILASHHAKWEYDIQVSWLDYLKGDPGGARFRCDLYWLA RFWNRWGEIEAAYPETILKVQYEETQRNPRATLEAIAAHWGIALTPEAIKAALFAGTKEEMAKKADPDGEPNVLQNRKQS LAELFTGEAMDIYTAHIRTLFRHDLGYDLLTPPA >Mature_273_residues TTPLPKEYLAKARSETWVNFSILRHGAFDGFLVTSKNSGTHWMMYMLSVALADSYGIERPKYYSENALRPYIGFPTDKPV YPQLPRLARSHTIPHRLADWDWARRLAGLPNYVLGIRHPMAILASHHAKWEYDIQVSWLDYLKGDPGGARFRCDLYWLAR FWNRWGEIEAAYPETILKVQYEETQRNPRATLEAIAAHWGIALTPEAIKAALFAGTKEEMAKKADPDGEPNVLQNRKQSL AELFTGEAMDIYTAHIRTLFRHDLGYDLLTPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31434; Mature: 31303
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPLPKEYLAKARSETWVNFSILRHGAFDGFLVTSKNSGTHWMMYMLSVALADSYGIER CCCCCCHHHHHHHHHCCEEEHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC PKYYSENALRPYIGFPTDKPVYPQLPRLARSHTIPHRLADWDWARRLAGLPNYVLGIRHP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHCCCHHHHHHHHH MAILASHHAKWEYDIQVSWLDYLKGDPGGARFRCDLYWLARFWNRWGEIEAAYPETILKV HHHHHHCCCCEEEEEEEEEHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCHHHEEE QYEETQRNPRATLEAIAAHWGIALTPEAIKAALFAGTKEEMAKKADPDGEPNVLQNRKQS EHHHHCCCHHHHHHHHHHHCCCEECHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHH LAELFTGEAMDIYTAHIRTLFRHDLGYDLLTPPA HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTPLPKEYLAKARSETWVNFSILRHGAFDGFLVTSKNSGTHWMMYMLSVALADSYGIER CCCCCHHHHHHHHHCCEEEHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC PKYYSENALRPYIGFPTDKPVYPQLPRLARSHTIPHRLADWDWARRLAGLPNYVLGIRHP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHCCCHHHHHHHHH MAILASHHAKWEYDIQVSWLDYLKGDPGGARFRCDLYWLARFWNRWGEIEAAYPETILKV HHHHHHCCCCEEEEEEEEEHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCHHHEEE QYEETQRNPRATLEAIAAHWGIALTPEAIKAALFAGTKEEMAKKADPDGEPNVLQNRKQS EHHHHCCCHHHHHHHHHHHCCCEECHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHH LAELFTGEAMDIYTAHIRTLFRHDLGYDLLTPPA HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA