| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is serC [H]
Identifier: 114797454
GI number: 114797454
Start: 3308179
End: 3309345
Strand: Reverse
Name: serC [H]
Synonym: HNE_3128
Alternate gene names: 114797454
Gene position: 3309345-3308179 (Counterclockwise)
Preceding gene: 114799789
Following gene: 114798225
Centisome position: 89.32
GC content: 60.15
Gene sequence:
>1167_bases ATGACCGTGACCACCGCCAAGCCGGCTGTACGCCCCGCTTGCCCCCATTTTTCGTCCGGCCCCACCGCCAAATATCCCGG TTTCTCGCTGCAGAACCTCGTGACGGCCGCCCTCGGCCGCTCGCACCGTTCGGGCGACGCCAAGAAAAAGCTGAAGGCTG CGATTGATCGCACCAAGCTGATCCTCGGCATTCCCGAGGACTACCGCGTGGCCATCGTCCCTGCGTCCGATACCGGCGCG GTCGAGATGTGCATGTGGTCGATGCTCGGCGTGAAGCCCGTCGATGTCTTCGCCTGGGAAAGTTTTGGCCAGGACTGGGT GACCGACGCTGTGAAACAGCTGAAGCTCGCCAACTGCAATACCTACACCGCTGATTACGGCCAGCTCCCGGACTTTGCCA AAGCCCGCGATGACGCCGACATCATCTTCACCTGGAACGGCACCACGTCAGGCGTCCGCGTGAAAGATGTCGACTGGATC AAGCCAAATCCGGACCGCGTCGTGATCTGCGACGCCACTTCGGCAGCTTTCAGCCAGGACATCGCCTGGGAAAAGCTCGA TGTGGTCACTTACAGCTGGCAGAAATGCCTCGGCGGGGAAGCGGCCCATGGCATGCTGATCCTGTCGCCAAATGCTGTGA AACGGCTTGAGAGCTACACGCCCGACCGCCCCCTGCCCAAACTCTTCCGTATGACCAAAGGCGGCAAGATCGACGAAGAA CTGTTCCAGGGCGCCACGATCAACACCCCTTCGATGCTGTGCGTGGAAGATTATCTCCAGGCGCTCGACTGGGTCGAACG CCTCGGCGGCTGGAAGAAGCTGAAAGCCCGCTCCGATGACAGCCTCTCCATTCTCACCGAATGGGAGAAGAAGTCTGACT GGATTGAATTCCTCTGCAAGGATACGTCCGTGCGCTCCAACACCGGCGTCACGTTCCTCATCAAGGATGCCCGTGTTGCG GGTCTTGATGAAGCCGGCCAGCGCGATTTCATCAAGAAGATGATGAAACGTCTGGAGACGGAGAATGCGTGCTTTGATGC GGCGGGTTATGCAAAGGCGCCTCCGGGTCTGCGCATCTGGGTCGGTGGCTCGGTCGAGCCATCGGATGTGAAGAAGCTTC TCCCCTGGCTCGACTGGGCCTTCCAGGAGGAAGCGGCGAAGCTTTGA
Upstream 100 bases:
>100_bases AGACCCCCTTTGTACTTGTACGGAAACTATGCGAAGGACGCGGCGGGCCAGGCGCCCCCAACGGCGCCCAGCCTATCTGT GAGGATAGGAGTAAAAACAG
Downstream 100 bases:
>100_bases GGCGCGCAGATGCCGACGCTGGAAGAGTTATCCGGAACATGTCTGCCTGATCCAGGACCAGACGCTACTGCGCTCGTAAG GCGCTGCAGCGTTTTTGCCA
Product: phosphoserine aminotransferase
Products: NA
Alternate protein names: Phosphohydroxythreonine aminotransferase; PSAT [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTVTTAKPAVRPACPHFSSGPTAKYPGFSLQNLVTAALGRSHRSGDAKKKLKAAIDRTKLILGIPEDYRVAIVPASDTGA VEMCMWSMLGVKPVDVFAWESFGQDWVTDAVKQLKLANCNTYTADYGQLPDFAKARDDADIIFTWNGTTSGVRVKDVDWI KPNPDRVVICDATSAAFSQDIAWEKLDVVTYSWQKCLGGEAAHGMLILSPNAVKRLESYTPDRPLPKLFRMTKGGKIDEE LFQGATINTPSMLCVEDYLQALDWVERLGGWKKLKARSDDSLSILTEWEKKSDWIEFLCKDTSVRSNTGVTFLIKDARVA GLDEAGQRDFIKKMMKRLETENACFDAAGYAKAPPGLRIWVGGSVEPSDVKKLLPWLDWAFQEEAAKL
Sequences:
>Translated_388_residues MTVTTAKPAVRPACPHFSSGPTAKYPGFSLQNLVTAALGRSHRSGDAKKKLKAAIDRTKLILGIPEDYRVAIVPASDTGA VEMCMWSMLGVKPVDVFAWESFGQDWVTDAVKQLKLANCNTYTADYGQLPDFAKARDDADIIFTWNGTTSGVRVKDVDWI KPNPDRVVICDATSAAFSQDIAWEKLDVVTYSWQKCLGGEAAHGMLILSPNAVKRLESYTPDRPLPKLFRMTKGGKIDEE LFQGATINTPSMLCVEDYLQALDWVERLGGWKKLKARSDDSLSILTEWEKKSDWIEFLCKDTSVRSNTGVTFLIKDARVA GLDEAGQRDFIKKMMKRLETENACFDAAGYAKAPPGLRIWVGGSVEPSDVKKLLPWLDWAFQEEAAKL >Mature_387_residues TVTTAKPAVRPACPHFSSGPTAKYPGFSLQNLVTAALGRSHRSGDAKKKLKAAIDRTKLILGIPEDYRVAIVPASDTGAV EMCMWSMLGVKPVDVFAWESFGQDWVTDAVKQLKLANCNTYTADYGQLPDFAKARDDADIIFTWNGTTSGVRVKDVDWIK PNPDRVVICDATSAAFSQDIAWEKLDVVTYSWQKCLGGEAAHGMLILSPNAVKRLESYTPDRPLPKLFRMTKGGKIDEEL FQGATINTPSMLCVEDYLQALDWVERLGGWKKLKARSDDSLSILTEWEKKSDWIEFLCKDTSVRSNTGVTFLIKDARVAG LDEAGQRDFIKKMMKRLETENACFDAAGYAKAPPGLRIWVGGSVEPSDVKKLLPWLDWAFQEEAAKL
Specific function: Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine [H]
COG id: COG1932
COG function: function code HE; Phosphoserine aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR022278 - InterPro: IPR006271 - InterPro: IPR015424 - InterPro: IPR015421 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.52 [H]
Molecular weight: Translated: 43040; Mature: 42908
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTTAKPAVRPACPHFSSGPTAKYPGFSLQNLVTAALGRSHRSGDAKKKLKAAIDRTKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCEE ILGIPEDYRVAIVPASDTGAVEMCMWSMLGVKPVDVFAWESFGQDWVTDAVKQLKLANCN EEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCC TYTADYGQLPDFAKARDDADIIFTWNGTTSGVRVKDVDWIKPNPDRVVICDATSAAFSQD CCCCCCCCCCCHHHCCCCCCEEEEECCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHC IAWEKLDVVTYSWQKCLGGEAAHGMLILSPNAVKRLESYTPDRPLPKLFRMTKGGKIDEE CCHHHHHHHEEHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCCHHHHHHCCCCCCHHH LFQGATINTPSMLCVEDYLQALDWVERLGGWKKLKARSDDSLSILTEWEKKSDWIEFLCK HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHC DTSVRSNTGVTFLIKDARVAGLDEAGQRDFIKKMMKRLETENACFDAAGYAKAPPGLRIW CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE VGGSVEPSDVKKLLPWLDWAFQEEAAKL ECCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVTTAKPAVRPACPHFSSGPTAKYPGFSLQNLVTAALGRSHRSGDAKKKLKAAIDRTKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCEE ILGIPEDYRVAIVPASDTGAVEMCMWSMLGVKPVDVFAWESFGQDWVTDAVKQLKLANCN EEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCC TYTADYGQLPDFAKARDDADIIFTWNGTTSGVRVKDVDWIKPNPDRVVICDATSAAFSQD CCCCCCCCCCCHHHCCCCCCEEEEECCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHC IAWEKLDVVTYSWQKCLGGEAAHGMLILSPNAVKRLESYTPDRPLPKLFRMTKGGKIDEE CCHHHHHHHEEHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCCHHHHHHCCCCCCHHH LFQGATINTPSMLCVEDYLQALDWVERLGGWKKLKARSDDSLSILTEWEKKSDWIEFLCK HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHC DTSVRSNTGVTFLIKDARVAGLDEAGQRDFIKKMMKRLETENACFDAAGYAKAPPGLRIW CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE VGGSVEPSDVKKLLPWLDWAFQEEAAKL ECCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]