| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is aat
Identifier: 114797414
GI number: 114797414
Start: 2352653
End: 2353429
Strand: Direct
Name: aat
Synonym: HNE_2251
Alternate gene names: 114797414
Gene position: 2352653-2353429 (Clockwise)
Preceding gene: 114798573
Following gene: 114799028
Centisome position: 63.5
GC content: 62.03
Gene sequence:
>777_bases ATGTCAGCCCGCTTCGGACCAGAAGACCTGCTCGCCTGCTATCGCCGGGGCGTATTTCCGATGGCCGATTCGCGGGACGA TCCCCGGCTGTTCCTCGTTGATCCGGACTTCAGGGGCATTCTTCCCCTTGACGCATTCCACATCCCCAAACGCCTGAAGC GCCGCGTCTGCCAGGACCCGTATCGCGTTAGCTTCGATACCGCCTTCACCCGCGTCGTCGAAGCCTGCGGCGAGCCGCAC GACAACCGGCCAAACACCTGGATCAACTCCCCCATCGTGAACCTCTACAGCGCATTGCACCGGCAAGGCTTCGCCCACTC GGTAGAGTGCTGGGACGGGGATCAATTGGTAGGCGGGCTCTATGGCGTGTCCCTGGGCGGCGCCTTTTTCGGCGAGAGCA TGTTCTCCCGTGCGACGGACGCGTCAAAGATCGCCCTCGTCCACCTTGCCGCCCGTCTGATCGACCGGGGCTATGTGCTG CTGGACGCGCAATTCCACAATCCGCATCTCACCCAGTTCGGCCTGATCGAAATCAGCCGTGACGCTTTCAAAGCGCGCCT GAAAGCCGCCCTCAAAGTGGGAGCAGATTTTCATGGCGGCTCTGACGGGCCAGCGCCCGATCAATCTATAGGGATGTCTT CGTCCGGCGGTGTTTCGGACTCGGTCACGCCTGCGGGCATGTCCTCATACAGCGGCTCTTCGCTTTCCGGAATGATCGCG CGCTCAGGCAGCTTCACCGGATCGGGCGCCGTGCAGCGAATAACCCAGATGTCGTAG
Upstream 100 bases:
>100_bases CGAAAAGTTCCTGGCCGAGAACAAGCTGCCGGCGGGCGAATAGCCCGCCCGGCATCCCGCCACATTTACAGCCTGCGCGG CGCAACCCATATCTTTGGTC
Downstream 100 bases:
>100_bases ACGGGATGCTCCAGCGCATTCAGGCCGGGCGAGGACGCATACATCCAGCCCGAAAACAGGATCGGGCTATCGGCTTCAGA CGGCGGCACATCCTTGGCCG
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSARFGPEDLLACYRRGVFPMADSRDDPRLFLVDPDFRGILPLDAFHIPKRLKRRVCQDPYRVSFDTAFTRVVEACGEPH DNRPNTWINSPIVNLYSALHRQGFAHSVECWDGDQLVGGLYGVSLGGAFFGESMFSRATDASKIALVHLAARLIDRGYVL LDAQFHNPHLTQFGLIEISRDAFKARLKAALKVGADFHGGSDGPAPDQSIGMSSSGGVSDSVTPAGMSSYSGSSLSGMIA RSGSFTGSGAVQRITQMS
Sequences:
>Translated_258_residues MSARFGPEDLLACYRRGVFPMADSRDDPRLFLVDPDFRGILPLDAFHIPKRLKRRVCQDPYRVSFDTAFTRVVEACGEPH DNRPNTWINSPIVNLYSALHRQGFAHSVECWDGDQLVGGLYGVSLGGAFFGESMFSRATDASKIALVHLAARLIDRGYVL LDAQFHNPHLTQFGLIEISRDAFKARLKAALKVGADFHGGSDGPAPDQSIGMSSSGGVSDSVTPAGMSSYSGSSLSGMIA RSGSFTGSGAVQRITQMS >Mature_257_residues SARFGPEDLLACYRRGVFPMADSRDDPRLFLVDPDFRGILPLDAFHIPKRLKRRVCQDPYRVSFDTAFTRVVEACGEPHD NRPNTWINSPIVNLYSALHRQGFAHSVECWDGDQLVGGLYGVSLGGAFFGESMFSRATDASKIALVHLAARLIDRGYVLL DAQFHNPHLTQFGLIEISRDAFKARLKAALKVGADFHGGSDGPAPDQSIGMSSSGGVSDSVTPAGMSSYSGSSLSGMIAR SGSFTGSGAVQRITQMS
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=176, Percent_Identity=43.1818181818182, Blast_Score=135, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_HYPNA (Q0BZZ7)
Other databases:
- EMBL: CP000158 - RefSeq: YP_760946.1 - ProteinModelPortal: Q0BZZ7 - SMR: Q0BZZ7 - STRING: Q0BZZ7 - GeneID: 4287680 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_2251 - NMPDR: fig|228405.5.peg.2170 - TIGR: HNE_2251 - eggNOG: COG2360 - HOGENOM: HBG485363 - OMA: EWISDEL - PhylomeDB: Q0BZZ7 - ProtClustDB: PRK00301 - BioCyc: HNEP81032:HNE_2251-MONOMER - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 27891; Mature: 27760
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARFGPEDLLACYRRGVFPMADSRDDPRLFLVDPDFRGILPLDAFHIPKRLKRRVCQDP CCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC YRVSFDTAFTRVVEACGEPHDNRPNTWINSPIVNLYSALHRQGFAHSVECWDGDQLVGGL CEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHH YGVSLGGAFFGESMFSRATDASKIALVHLAARLIDRGYVLLDAQFHNPHLTQFGLIEISR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEHEEECH DAFKARLKAALKVGADFHGGSDGPAPDQSIGMSSSGGVSDSVTPAGMSSYSGSSLSGMIA HHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEE RSGSFTGSGAVQRITQMS CCCCCCCCHHHHHHHHCC >Mature Secondary Structure SARFGPEDLLACYRRGVFPMADSRDDPRLFLVDPDFRGILPLDAFHIPKRLKRRVCQDP CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC YRVSFDTAFTRVVEACGEPHDNRPNTWINSPIVNLYSALHRQGFAHSVECWDGDQLVGGL CEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHH YGVSLGGAFFGESMFSRATDASKIALVHLAARLIDRGYVLLDAQFHNPHLTQFGLIEISR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEHEEECH DAFKARLKAALKVGADFHGGSDGPAPDQSIGMSSSGGVSDSVTPAGMSSYSGSSLSGMIA HHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEE RSGSFTGSGAVQRITQMS CCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA