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The map label for this gene is ybgC [H]

Identifier: 114797377

GI number: 114797377

Start: 132681

End: 133136

Strand: Direct

Name: ybgC [H]

Synonym: HNE_0150

Alternate gene names: 114797377

Gene position: 132681-133136 (Clockwise)

Preceding gene: 114797615

Following gene: 114799599

Centisome position: 3.58

GC content: 58.99

Gene sequence:

>456_bases
ATGAGCTTACCTGATCTTGATTCTGAAAACTTTGACGTGGCCCGCCAGCACTGGATCGCCGTGCGCGTCTATTATGAAGA
CACAGACTTCACCGGCATGGTCTACCACGCCAACTATCTGCGCTTCTTTGAGCGGGGCCGGTCAGATCATCTCCGCGATG
CGGGTATTTCCCATCAATCGCTGCTGGCGCGCGAAGACCCTGCCGCCTTCACGCTGACGAATGTGAACGTCACCTATCGC
AAGCCCGGCAGGGTGGATGATCTTCTGCATATCCGCACGCGCTATCTGGGCATGGATGGCCCGCGTATCCGCTTCTCTCA
GGCCTGTCTGCGGGAAGGGGAGGTGATCGCTGAGGCCGAGATCACTGCCGTGATGATCCATGCGGACGGGCGCCTGCGCC
GCCCGATCAAGGAAATTGCAGAGCGGCTGGAAGCTTACAGGTGGATGGCGGGTTAA

Upstream 100 bases:

>100_bases
CGCTGCGGCAGACGGCTTCGGACATGGCAGAAGCACTCACCCTCGTCGATACGCTCGCCCACGCCTTCATGCTGGCGCGC
AAGTCTGATACGGGCACGGT

Downstream 100 bases:

>100_bases
CGGCGCTGCGGGGTGCCGAAGACATCCCGGGCTCTGACCAAATTCAGGCAATTTCTGAATCCCAATGCACCGCTTTATGT
GGGCCGTCAGCGCGGCTTAA

Product: thioesterase family protein

Products: NA

Alternate protein names: Acyl-CoA thioesterase [H]

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSLPDLDSENFDVARQHWIAVRVYYEDTDFTGMVYHANYLRFFERGRSDHLRDAGISHQSLLAREDPAAFTLTNVNVTYR
KPGRVDDLLHIRTRYLGMDGPRIRFSQACLREGEVIAEAEITAVMIHADGRLRRPIKEIAERLEAYRWMAG

Sequences:

>Translated_151_residues
MSLPDLDSENFDVARQHWIAVRVYYEDTDFTGMVYHANYLRFFERGRSDHLRDAGISHQSLLAREDPAAFTLTNVNVTYR
KPGRVDDLLHIRTRYLGMDGPRIRFSQACLREGEVIAEAEITAVMIHADGRLRRPIKEIAERLEAYRWMAG
>Mature_150_residues
SLPDLDSENFDVARQHWIAVRVYYEDTDFTGMVYHANYLRFFERGRSDHLRDAGISHQSLLAREDPAAFTLTNVNVTYRK
PGRVDDLLHIRTRYLGMDGPRIRFSQACLREGEVIAEAEITAVMIHADGRLRRPIKEIAERLEAYRWMAG

Specific function: Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond [H]

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=107, Percent_Identity=42.0560747663551, Blast_Score=86, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17541; Mature: 17410

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPDLDSENFDVARQHWIAVRVYYEDTDFTGMVYHANYLRFFERGRSDHLRDAGISHQS
CCCCCCCCCCCCHHCEEEEEEEEEEECCCCEEEEEHHHHHHHHHCCCCCCHHHCCCCHHH
LLAREDPAAFTLTNVNVTYRKPGRVDDLLHIRTRYLGMDGPRIRFSQACLREGEVIAEAE
HHHCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECE
ITAVMIHADGRLRRPIKEIAERLEAYRWMAG
EEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLPDLDSENFDVARQHWIAVRVYYEDTDFTGMVYHANYLRFFERGRSDHLRDAGISHQS
CCCCCCCCCCCHHCEEEEEEEEEEECCCCEEEEEHHHHHHHHHCCCCCCHHHCCCCHHH
LLAREDPAAFTLTNVNVTYRKPGRVDDLLHIRTRYLGMDGPRIRFSQACLREGEVIAEAE
HHHCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECE
ITAVMIHADGRLRRPIKEIAERLEAYRWMAG
EEEEEEECCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]