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The map label for this gene is glcD [H]

Identifier: 114797272

GI number: 114797272

Start: 932772

End: 934175

Strand: Reverse

Name: glcD [H]

Synonym: HNE_0916

Alternate gene names: 114797272

Gene position: 934175-932772 (Counterclockwise)

Preceding gene: 114799502

Following gene: 114800068

Centisome position: 25.21

GC content: 65.88

Gene sequence:

>1404_bases
ATGCTTCCCTCCGCTTTTCTCGCCGCTGTCAAAGACCTGCTCGGGCCCAAGGGCTGGAGTGAGGCGCCGGAGACATTGCT
GGCCGCGTCGACGCCGTGGCGGGGGACGTATCAGGGGAACACGCCGCTGATCGTGCGGCCGGCCTCTACCACTGAGGCAG
CGGCGCTGGTGAAGCTGTGCGGGCAGTATGGCGTGGCGATGACGCCGCAGGGGGGCAATACCGGGCTGATCGACGGGGGC
ACGCCGCATGGCGAAGTGTGTGTGTCGATGACGCGGATGAACGCTCTGCGCGAGACCGACACGTTCAATAACTCCCTGAC
CATCGAGGCAGGCGCGACGCTGGTGGCGGCGCAGCAGGCGGCCGAGGCGGCGGGGCGGCTCTTTCCGCTCTCGCTCGGCT
CGGAAGGGACCGCGACCATCGGGGGCCTTATCTCGACCAATGCCGGGGGCGTCGCGGTGCTGCGCTATGGGATGATGCGG
GACCTGATCCTGGGGCTGGAGGTGGTGTTGCCGTCTGGCGAAGTGTGGGACGGGCTGTCGGGGCTGCGCAAGAACAATAC
CGGATATGACCTGAAGCATCTGTTTGCCGGGGCGGAGGGGACGCTGGGGCTGATTACGGCGGCGACGCTGAAACTCTTCC
CGCAGGTGTCGAGCGCGACAGCCTGGGTGATCTGTGCGTCGGCGGATGATGTGGTGAAGCTGCTTTCCCTGGTGCGCGGC
CGGGTTGGGGATTCGGTGACGAGTTTCGAAATTATCCCGGCCAATGCCGTGGACATGGTGGTGGCGGATATTCCCACCGC
GCGGGACCCAATGCCCTCGAATGCGCCGTGGCGGGTGCTCATGGAAGTGTCGCAGACGGACGGGGCGTATGCGCGTACCC
TGCTGGAAAGCGCGCTGGCGGCGGCGATGGAGGAAGGCCTGGTGCAGGACGCCGCGATTGCGACGAGCGAGGCGCAGGCC
AAGGCCTTCTGGCATATCCGCGAGACGATCCCCCTTTCCAAGCGCGCCTATGGGGCGGCGCTGAACCAGGATATTTCCGT
GCCGGTGAGCCGGATTCCGGTGTTTATTGAAGCCTGCAATGCCGCCGTTCGCACTGTTCTGCCTACGGCGGATTTTGTGA
TCTTCGGGCATGTGGGAGACGGGAATCTACACTATTCCGTGGTTGAAGCGCAGGGGGCGGCGGCGCCGCAGCTGAAGGAC
CATGAGGGCGCAATCACGCGGGTGATCTATGACACGGTGATGGCGCATGGCGGGTCGATCTCTGCCGAACATGGCGTGGG
GCGGCTGAAACGCGATGAGCTGGCGCGCCTGCGTCCGCCCGCCGCGACCCAGGCGATGCGGGCGATCAAACGCGCGCTGG
ACCCGCAGGGCATCATGAACCCCGGACGCGTTGTTTCGGTGTGA

Upstream 100 bases:

>100_bases
CCGCAAAATGCTCGAATGGCGGCAAGGTCCCGGATCGCCGCTTTGCCGCATCCGGGATGACACGGGGGTTGGAGGCGGGT
TAGAGAGGGGCATGACCCAG

Downstream 100 bases:

>100_bases
GCCCCCTCCCCTGCTGGGAAAAGTTTCCAGTTTGTTAACCCCTCGCTAACCAAACTTTAAGAGACCCTAACCAGCCGCAG
AATGCGATGGGGGACAGCCA

Product: FAD-binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MLPSAFLAAVKDLLGPKGWSEAPETLLAASTPWRGTYQGNTPLIVRPASTTEAAALVKLCGQYGVAMTPQGGNTGLIDGG
TPHGEVCVSMTRMNALRETDTFNNSLTIEAGATLVAAQQAAEAAGRLFPLSLGSEGTATIGGLISTNAGGVAVLRYGMMR
DLILGLEVVLPSGEVWDGLSGLRKNNTGYDLKHLFAGAEGTLGLITAATLKLFPQVSSATAWVICASADDVVKLLSLVRG
RVGDSVTSFEIIPANAVDMVVADIPTARDPMPSNAPWRVLMEVSQTDGAYARTLLESALAAAMEEGLVQDAAIATSEAQA
KAFWHIRETIPLSKRAYGAALNQDISVPVSRIPVFIEACNAAVRTVLPTADFVIFGHVGDGNLHYSVVEAQGAAAPQLKD
HEGAITRVIYDTVMAHGGSISAEHGVGRLKRDELARLRPPAATQAMRAIKRALDPQGIMNPGRVVSV

Sequences:

>Translated_467_residues
MLPSAFLAAVKDLLGPKGWSEAPETLLAASTPWRGTYQGNTPLIVRPASTTEAAALVKLCGQYGVAMTPQGGNTGLIDGG
TPHGEVCVSMTRMNALRETDTFNNSLTIEAGATLVAAQQAAEAAGRLFPLSLGSEGTATIGGLISTNAGGVAVLRYGMMR
DLILGLEVVLPSGEVWDGLSGLRKNNTGYDLKHLFAGAEGTLGLITAATLKLFPQVSSATAWVICASADDVVKLLSLVRG
RVGDSVTSFEIIPANAVDMVVADIPTARDPMPSNAPWRVLMEVSQTDGAYARTLLESALAAAMEEGLVQDAAIATSEAQA
KAFWHIRETIPLSKRAYGAALNQDISVPVSRIPVFIEACNAAVRTVLPTADFVIFGHVGDGNLHYSVVEAQGAAAPQLKD
HEGAITRVIYDTVMAHGGSISAEHGVGRLKRDELARLRPPAATQAMRAIKRALDPQGIMNPGRVVSV
>Mature_467_residues
MLPSAFLAAVKDLLGPKGWSEAPETLLAASTPWRGTYQGNTPLIVRPASTTEAAALVKLCGQYGVAMTPQGGNTGLIDGG
TPHGEVCVSMTRMNALRETDTFNNSLTIEAGATLVAAQQAAEAAGRLFPLSLGSEGTATIGGLISTNAGGVAVLRYGMMR
DLILGLEVVLPSGEVWDGLSGLRKNNTGYDLKHLFAGAEGTLGLITAATLKLFPQVSSATAWVICASADDVVKLLSLVRG
RVGDSVTSFEIIPANAVDMVVADIPTARDPMPSNAPWRVLMEVSQTDGAYARTLLESALAAAMEEGLVQDAAIATSEAQA
KAFWHIRETIPLSKRAYGAALNQDISVPVSRIPVFIEACNAAVRTVLPTADFVIFGHVGDGNLHYSVVEAQGAAAPQLKD
HEGAITRVIYDTVMAHGGSISAEHGVGRLKRDELARLRPPAATQAMRAIKRALDPQGIMNPGRVVSV

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=462, Percent_Identity=35.9307359307359, Blast_Score=274, Evalue=1e-73,
Organism=Homo sapiens, GI37595756, Length=446, Percent_Identity=30.4932735426009, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI37595754, Length=469, Percent_Identity=29.4243070362473, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI4501993, Length=185, Percent_Identity=29.1891891891892, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI1789351, Length=440, Percent_Identity=27.9545454545455, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI1787977, Length=513, Percent_Identity=24.5614035087719, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI48994907, Length=173, Percent_Identity=27.1676300578035, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17534361, Length=470, Percent_Identity=30.2127659574468, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI71992373, Length=445, Percent_Identity=26.9662921348315, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71992381, Length=443, Percent_Identity=25.9593679458239, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI71992392, Length=402, Percent_Identity=27.1144278606965, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17556096, Length=177, Percent_Identity=25.9887005649718, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320023, Length=451, Percent_Identity=32.8159645232816, Blast_Score=292, Evalue=9e-80,
Organism=Saccharomyces cerevisiae, GI6320764, Length=460, Percent_Identity=31.304347826087, Blast_Score=256, Evalue=4e-69,
Organism=Saccharomyces cerevisiae, GI6320027, Length=483, Percent_Identity=26.2939958592132, Blast_Score=135, Evalue=1e-32,
Organism=Drosophila melanogaster, GI18921117, Length=455, Percent_Identity=34.7252747252747, Blast_Score=270, Evalue=2e-72,
Organism=Drosophila melanogaster, GI24639277, Length=455, Percent_Identity=34.7252747252747, Blast_Score=270, Evalue=2e-72,
Organism=Drosophila melanogaster, GI24639275, Length=455, Percent_Identity=34.7252747252747, Blast_Score=270, Evalue=2e-72,
Organism=Drosophila melanogaster, GI24653753, Length=196, Percent_Identity=29.0816326530612, Blast_Score=76, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 48838; Mature: 48838

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSAFLAAVKDLLGPKGWSEAPETLLAASTPWRGTYQGNTPLIVRPASTTEAAALVKLC
CCCHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCEECCCCCEEEECCCCHHHHHHHHHH
GQYGVAMTPQGGNTGLIDGGTPHGEVCVSMTRMNALRETDTFNNSLTIEAGATLVAAQQA
HHCCEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
AEAAGRLFPLSLGSEGTATIGGLISTNAGGVAVLRYGMMRDLILGLEVVLPSGEVWDGLS
HHHHCCEEEEECCCCCCEEECCEEECCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHH
GLRKNNTGYDLKHLFAGAEGTLGLITAATLKLFPQVSSATAWVICASADDVVKLLSLVRG
HHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHH
RVGDSVTSFEIIPANAVDMVVADIPTARDPMPSNAPWRVLMEVSQTDGAYARTLLESALA
HCCCCCEEEEEECCCHHHHHEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
AAMEEGLVQDAAIATSEAQAKAFWHIRETIPLSKRAYGAALNQDISVPVSRIPVFIEACN
HHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
AAVRTVLPTADFVIFGHVGDGNLHYSVVEAQGAAAPQLKDHEGAITRVIYDTVMAHGGSI
HHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
SAEHGVGRLKRDELARLRPPAATQAMRAIKRALDPQGIMNPGRVVSV
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEC
>Mature Secondary Structure
MLPSAFLAAVKDLLGPKGWSEAPETLLAASTPWRGTYQGNTPLIVRPASTTEAAALVKLC
CCCHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCEECCCCCEEEECCCCHHHHHHHHHH
GQYGVAMTPQGGNTGLIDGGTPHGEVCVSMTRMNALRETDTFNNSLTIEAGATLVAAQQA
HHCCEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
AEAAGRLFPLSLGSEGTATIGGLISTNAGGVAVLRYGMMRDLILGLEVVLPSGEVWDGLS
HHHHCCEEEEECCCCCCEEECCEEECCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHH
GLRKNNTGYDLKHLFAGAEGTLGLITAATLKLFPQVSSATAWVICASADDVVKLLSLVRG
HHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHH
RVGDSVTSFEIIPANAVDMVVADIPTARDPMPSNAPWRVLMEVSQTDGAYARTLLESALA
HCCCCCEEEEEECCCHHHHHEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
AAMEEGLVQDAAIATSEAQAKAFWHIRETIPLSKRAYGAALNQDISVPVSRIPVFIEACN
HHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
AAVRTVLPTADFVIFGHVGDGNLHYSVVEAQGAAAPQLKDHEGAITRVIYDTVMAHGGSI
HHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
SAEHGVGRLKRDELARLRPPAATQAMRAIKRALDPQGIMNPGRVVSV
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]