| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yijE [C]
Identifier: 114797168
GI number: 114797168
Start: 3354429
End: 3355367
Strand: Reverse
Name: yijE [C]
Synonym: HNE_3178
Alternate gene names: 114797168
Gene position: 3355367-3354429 (Counterclockwise)
Preceding gene: 114797287
Following gene: 114799826
Centisome position: 90.56
GC content: 69.22
Gene sequence:
>939_bases ATGACAGAGGCATCTCTGCCGGGGGCGAAGATCGCACGCCCGGCCATCGTCTGGATTCTGTTTGCCACCCTGACAACTCT CTGGGCCGGCGCCTATGGGCTGACGCGCGTGGCGGTCGGCAAGGGGACGCTGGAAGGCCTGCCGCCTGAATGGGTGCTGC CGGGGCGCCTGACCGGCGGGGCAATCGTGCTGCTGACGCTGATGCTGGTGATGGGCAAGCGCCTGCCGCCTTTCTCGGAC CTGCGCCGCTGGGGCGTGATCGGCGCCATGGGGGTGGTCGGCTCGCTGGTGCCGTTCTTCCTGATCACCGTGGCCCAGCA GACGGTCGATTCCAGCCTGGCAGCGCTCTATACGGCGGCCGCGCCGGTCTTTGTGGTACTGGGCGCGACCCTGTTTTTTG CCGACGAACGCATGACGCGGAACACCGGGCTGGGCGTATTGCTCGGCTTTGCGGGGGTTCTGGCGCTGTTCGGGCCCGAT GCTGTGCGCCATTTCGGCTCCGCCAGCGTGACGGCGCAATTGCTGCTGCTGCTGGCGACGCTGTCATTCTCCGCCAGCAC GCTGATTGCCCGCGCCGCGCCCAAGATGGATGCGATCCCGCTGGCGGCGGGCTTTGTCACCGTCTCGGCGGTGGTCTCCT GGCCGCTGGCGCTGACGGTGCACCCGTCCGAGGTCGAGGCAGACTGGCACCACTGGGCGGCTGTGGCAGGGCTGGGGCTG GGCCCCTCGGGCATCGCGCAGGCCCTCTATATGGCGCTGGTGGCGCGGGCAGGGGCGACGTTCCAGTCGCTGACGGGCTA TTCGGTGCCGGTGGTGGGGGCGGCATTCGGCTGGCTGTTCTTTCGGGAAACCCAGAGCTGGAACGCGGCGCTGGCCTTTG CGCTGATCCTGGGGGGCGTGTGGCTTGCCCGGCAGGGCGGGCGCGGCCGGGTTGGGTAA
Upstream 100 bases:
>100_bases GCGAAACGGGACAAACGGGATTTGACGCCTTGCCGCTTGCAAGCTGCGTGCTAGTCCGGAGGGACAACAAGTGGCGCTCG ACGCTGCGGGGAGGACAACG
Downstream 100 bases:
>100_bases GGGACTTATCCACGGGATAGACACTCGCCCCTGAGGGGAATTTTGCCGGGCGAGACGCGCCGGAAAACTCCAAAAAACTC CAGGAAAAACTCCAACGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTEASLPGAKIARPAIVWILFATLTTLWAGAYGLTRVAVGKGTLEGLPPEWVLPGRLTGGAIVLLTLMLVMGKRLPPFSD LRRWGVIGAMGVVGSLVPFFLITVAQQTVDSSLAALYTAAAPVFVVLGATLFFADERMTRNTGLGVLLGFAGVLALFGPD AVRHFGSASVTAQLLLLLATLSFSASTLIARAAPKMDAIPLAAGFVTVSAVVSWPLALTVHPSEVEADWHHWAAVAGLGL GPSGIAQALYMALVARAGATFQSLTGYSVPVVGAAFGWLFFRETQSWNAALAFALILGGVWLARQGGRGRVG
Sequences:
>Translated_312_residues MTEASLPGAKIARPAIVWILFATLTTLWAGAYGLTRVAVGKGTLEGLPPEWVLPGRLTGGAIVLLTLMLVMGKRLPPFSD LRRWGVIGAMGVVGSLVPFFLITVAQQTVDSSLAALYTAAAPVFVVLGATLFFADERMTRNTGLGVLLGFAGVLALFGPD AVRHFGSASVTAQLLLLLATLSFSASTLIARAAPKMDAIPLAAGFVTVSAVVSWPLALTVHPSEVEADWHHWAAVAGLGL GPSGIAQALYMALVARAGATFQSLTGYSVPVVGAAFGWLFFRETQSWNAALAFALILGGVWLARQGGRGRVG >Mature_311_residues TEASLPGAKIARPAIVWILFATLTTLWAGAYGLTRVAVGKGTLEGLPPEWVLPGRLTGGAIVLLTLMLVMGKRLPPFSDL RRWGVIGAMGVVGSLVPFFLITVAQQTVDSSLAALYTAAAPVFVVLGATLFFADERMTRNTGLGVLLGFAGVLALFGPDA VRHFGSASVTAQLLLLLATLSFSASTLIARAAPKMDAIPLAAGFVTVSAVVSWPLALTVHPSEVEADWHHWAAVAGLGLG PSGIAQALYMALVARAGATFQSLTGYSVPVVGAAFGWLFFRETQSWNAALAFALILGGVWLARQGGRGRVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32453; Mature: 32321
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEASLPGAKIARPAIVWILFATLTTLWAGAYGLTRVAVGKGTLEGLPPEWVLPGRLTGG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCH AIVLLTLMLVMGKRLPPFSDLRRWGVIGAMGVVGSLVPFFLITVAQQTVDSSLAALYTAA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APVFVVLGATLFFADERMTRNTGLGVLLGFAGVLALFGPDAVRHFGSASVTAQLLLLLAT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHH LSFSASTLIARAAPKMDAIPLAAGFVTVSAVVSWPLALTVHPSEVEADWHHWAAVAGLGL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHCCHHHHHHHHHHCCC GPSGIAQALYMALVARAGATFQSLTGYSVPVVGAAFGWLFFRETQSWNAALAFALILGGV CHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH WLARQGGRGRVG HHCCCCCCCCCC >Mature Secondary Structure TEASLPGAKIARPAIVWILFATLTTLWAGAYGLTRVAVGKGTLEGLPPEWVLPGRLTGG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCH AIVLLTLMLVMGKRLPPFSDLRRWGVIGAMGVVGSLVPFFLITVAQQTVDSSLAALYTAA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APVFVVLGATLFFADERMTRNTGLGVLLGFAGVLALFGPDAVRHFGSASVTAQLLLLLAT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHH LSFSASTLIARAAPKMDAIPLAAGFVTVSAVVSWPLALTVHPSEVEADWHHWAAVAGLGL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHCCHHHHHHHHHHCCC GPSGIAQALYMALVARAGATFQSLTGYSVPVVGAAFGWLFFRETQSWNAALAFALILGGV CHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH WLARQGGRGRVG HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA