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The map label for this gene is kamA [H]

Identifier: 114797088

GI number: 114797088

Start: 3317406

End: 3318455

Strand: Reverse

Name: kamA [H]

Synonym: HNE_3138

Alternate gene names: 114797088

Gene position: 3318455-3317406 (Counterclockwise)

Preceding gene: 114799660

Following gene: 114798691

Centisome position: 89.57

GC content: 61.43

Gene sequence:

>1050_bases
ATGAAGCCGGTGACATATCGGCATGCCGGGGAGTTGCTGACTGCGGGGATCATATCGGCAGATCAGCTGCCGGTCGTTTC
CCGCGTCGCGGAAAACTATGTGATCGCGTTGCCCGCGCGTCTGGCCACCCTGATCGACAGGGACGATCCGTTGGATCCGA
TCGGCTTGCAATATGTTCCGTCCGGGGAAGAGCTGAATGCCCAGCCCGGCGAGATGGATGACCCTATCGGCGACGCCGCC
CACAGTCCCATACCGGGCATCGTCCACCGCTATCCTGACCGGGTTCTTCTGAAGATCACATCGACCTGTCCGGTCTATTG
CCGTTTCTGCTTTCGCAGAGAGCGGGTCGGTCCGGAGAAGGGGGACGCACTGAGCAAGGCGGAAATCGATGCCGCGTGTG
CCTATATCGCAGACCGGCCAGAGATTTTTGAAGTTATCCTGACCGGCGGCGATCCCATGATCCTCTCGCCCGCCCGCGCA
GGGGCTTTGACCCGGCGGCTGGAAGCGATCGACCATGTAAAAGTCATCCGCTGGCACAGTCGCGTGCCGGTTGCCGCGCC
GGAGCGCGTAACGCCGGAATTTACCGAAGCAATTCGCAGCAGCGAGAAAGCGGTCTTTGTCGCGGTCCACGCCAATCATG
CCAGAGAGTTTACGCCTGAAGCGGTCGCGGCGATCCGGCGTCTGTCACAGGCGGGCATATCGCTCGTCTCCCAATCGGTG
CTGCTGCGCGGCGTAAATGACACGTTCGAAGCGCTGGCAGATCTGATGCGGGCTTTCCTCAGTGTGGGGATAAAACCCTA
TTACCTCCACCAGTTGGATGCGGCGCCTGGAACCTCGCACTTTCGGGTGCCGGTCGAGGAAGGGCAGGCGTTGGTGCGCC
GCCTCAGGGATGAACTTTCCGGCCTGGCGACACCTACCTATGTGGCCGATATTCCTGGCGGGGTCTCAAAGGCGGTGATG
AACCTTCCCGACATTGAGCGTCGGGACGACGCCTTCGTTCTGCGTGGCCGGGATGGAGAGACCTATCTGCCGCCCGGTTA
TACCGGGTAG

Upstream 100 bases:

>100_bases
TGGCGCTTGGCTTTGACCGGTTGGCCATGCTGGCAAGCGGCGCGCCGTCCATCTCGGATGTCCTCTGGACGCCGCCCGTG
ATCCTAGAGGAGCCCGCGTC

Downstream 100 bases:

>100_bases
CGCTACCGCTATTCTTCTGCGCCCCGTTTTCCGCTGGCCAGCAAGAGCAAGGCGACGAAGCCGATGGATGTGGCCTGGCT
CGAGAATAGCTCCAGCAACG

Product: putative L-lysine 2,3-aminomutase

Products: NA

Alternate protein names: LAM; KAM [H]

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKPVTYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVPSGEELNAQPGEMDDPIGDAA
HSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEKGDALSKAEIDAACAYIADRPEIFEVILTGGDPMILSPARA
GALTRRLEAIDHVKVIRWHSRVPVAAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSV
LLRGVNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELSGLATPTYVADIPGGVSKAVM
NLPDIERRDDAFVLRGRDGETYLPPGYTG

Sequences:

>Translated_349_residues
MKPVTYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVPSGEELNAQPGEMDDPIGDAA
HSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEKGDALSKAEIDAACAYIADRPEIFEVILTGGDPMILSPARA
GALTRRLEAIDHVKVIRWHSRVPVAAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSV
LLRGVNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELSGLATPTYVADIPGGVSKAVM
NLPDIERRDDAFVLRGRDGETYLPPGYTG
>Mature_349_residues
MKPVTYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVPSGEELNAQPGEMDDPIGDAA
HSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEKGDALSKAEIDAACAYIADRPEIFEVILTGGDPMILSPARA
GALTRRLEAIDHVKVIRWHSRVPVAAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSV
LLRGVNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELSGLATPTYVADIPGGVSKAVM
NLPDIERRDDAFVLRGRDGETYLPPGYTG

Specific function: Catalyzes the interconversion of L-alpha-lysine and L- beta-lysine [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=313, Percent_Identity=35.1437699680511, Blast_Score=197, Evalue=6e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022459
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: =5.4.3.2 [H]

Molecular weight: Translated: 38097; Mature: 38097

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVTYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVP
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCCCEEECC
SGEELNAQPGEMDDPIGDAAHSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCC
GDALSKAEIDAACAYIADRPEIFEVILTGGDPMILSPARAGALTRRLEAIDHVKVIRWHS
CCCHHHHHHHHHHHHHCCCHHEEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHCCC
RVPVAAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSV
CCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLRGVNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELS
HHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHH
GLATPTYVADIPGGVSKAVMNLPDIERRDDAFVLRGRDGETYLPPGYTG
CCCCCCEEECCCCCHHHHHHCCCCCCCCCCEEEEECCCCCEECCCCCCC
>Mature Secondary Structure
MKPVTYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVP
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCCCEEECC
SGEELNAQPGEMDDPIGDAAHSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCC
GDALSKAEIDAACAYIADRPEIFEVILTGGDPMILSPARAGALTRRLEAIDHVKVIRWHS
CCCHHHHHHHHHHHHHCCCHHEEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHCCC
RVPVAAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSV
CCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLRGVNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELS
HHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHH
GLATPTYVADIPGGVSKAVMNLPDIERRDDAFVLRGRDGETYLPPGYTG
CCCCCCEEECCCCCHHHHHHCCCCCCCCCCEEEEECCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10629195 [H]