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The map label for this gene is yodM [H]

Identifier: 114797063

GI number: 114797063

Start: 566139

End: 566831

Strand: Direct

Name: yodM [H]

Synonym: HNE_0568

Alternate gene names: 114797063

Gene position: 566139-566831 (Clockwise)

Preceding gene: 114798029

Following gene: 114798069

Centisome position: 15.28

GC content: 59.6

Gene sequence:

>693_bases
ATGAAGCCCCCAGCCTGGATGCCGACACTCTCGATCGCCTCGATCCGCGAGGTTGGTCCTATAGCTGTTCTTGGGATTAT
TGCGCTCTGCCTTCTGGGCTTTGCCTGGCTGGCGGATGAAATCTCCGAGAACGACATCCATGCCTTCGACCATGCCGTGA
TGACCTGGCTCCATGCGCCCGGAGAGGCTTCCAAGCCACTTGGGCCCGATTGGCTGCTCAATTCCATGATCGATATTACC
GCACTTGGTGGGTACACGATCCTGATATTGCTGACGCTTGGCGCTGCGCTCTACCGCATCGCACGAAAGGATTATGTGAC
CGCAGGCGTGGTGGTCGCTGCAATTGGCTCGGGCGCGCTGGTAACCAATCTTCTCAAACTTGGATTTGACCGGGCACGAC
CCGATTTCGTGGAACATCTCACGCATGCCGCCAGTTCAAGCTTTCCAAGCGGCCATGCGACCCAGGCGGCCATCGCCTTT
CTAACGCTTGGCGCGCTTATGGCCCGAACCCAGGAAAACCGCCGGGTCAAAGCGCTGATCCTGGGCGGGGCGCTTTTCCT
GACAATTCTTGTGGGCATAAGCCGCCTCTATCTTGGTGTGCATTGGCCGACCGACGTGCTGGCTGGCTGGTGCCTCGGCG
CAGCATGGGCCGGTCTCTGGTGGCTCTTGCTGCGCCGGATTGCGGGGAACTGA

Upstream 100 bases:

>100_bases
AGCTCAATTTCCATGAGCTGTTCGAGCAAAGTCTGGAGGGCTTCTCCGTTGAGAAGGTGACGGCGCGCCAGGCTGAGGCA
CTTGGACGGGCAGGCCTTGC

Downstream 100 bases:

>100_bases
TTTGTAATCAGCTCATCTTGAAGCGGATCGGCACGGACTTTGGTCCGCTGACGAAGTTGGCCTGGGTGCGTTGGGGTTTG
CCGGCCATCTCGATGGAATG

Product: PAP2 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKPPAWMPTLSIASIREVGPIAVLGIIALCLLGFAWLADEISENDIHAFDHAVMTWLHAPGEASKPLGPDWLLNSMIDIT
ALGGYTILILLTLGAALYRIARKDYVTAGVVVAAIGSGALVTNLLKLGFDRARPDFVEHLTHAASSSFPSGHATQAAIAF
LTLGALMARTQENRRVKALILGGALFLTILVGISRLYLGVHWPTDVLAGWCLGAAWAGLWWLLLRRIAGN

Sequences:

>Translated_230_residues
MKPPAWMPTLSIASIREVGPIAVLGIIALCLLGFAWLADEISENDIHAFDHAVMTWLHAPGEASKPLGPDWLLNSMIDIT
ALGGYTILILLTLGAALYRIARKDYVTAGVVVAAIGSGALVTNLLKLGFDRARPDFVEHLTHAASSSFPSGHATQAAIAF
LTLGALMARTQENRRVKALILGGALFLTILVGISRLYLGVHWPTDVLAGWCLGAAWAGLWWLLLRRIAGN
>Mature_230_residues
MKPPAWMPTLSIASIREVGPIAVLGIIALCLLGFAWLADEISENDIHAFDHAVMTWLHAPGEASKPLGPDWLLNSMIDIT
ALGGYTILILLTLGAALYRIARKDYVTAGVVVAAIGSGALVTNLLKLGFDRARPDFVEHLTHAASSSFPSGHATQAAIAF
LTLGALMARTQENRRVKALILGGALFLTILVGISRLYLGVHWPTDVLAGWCLGAAWAGLWWLLLRRIAGN

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PA-phosphatase related phosphoesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 24623; Mature: 24623

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPPAWMPTLSIASIREVGPIAVLGIIALCLLGFAWLADEISENDIHAFDHAVMTWLHAP
CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GEASKPLGPDWLLNSMIDITALGGYTILILLTLGAALYRIARKDYVTAGVVVAAIGSGAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VTNLLKLGFDRARPDFVEHLTHAASSSFPSGHATQAAIAFLTLGALMARTQENRRVKALI
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LGGALFLTILVGISRLYLGVHWPTDVLAGWCLGAAWAGLWWLLLRRIAGN
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPPAWMPTLSIASIREVGPIAVLGIIALCLLGFAWLADEISENDIHAFDHAVMTWLHAP
CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GEASKPLGPDWLLNSMIDITALGGYTILILLTLGAALYRIARKDYVTAGVVVAAIGSGAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VTNLLKLGFDRARPDFVEHLTHAASSSFPSGHATQAAIAFLTLGALMARTQENRRVKALI
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LGGALFLTILVGISRLYLGVHWPTDVLAGWCLGAAWAGLWWLLLRRIAGN
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]