Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
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Accession | NC_008345 |
Length | 4,845,257 |
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The map label for this gene is secD
Identifier: 114563865
GI number:
Start: 3244182
End: 3246032
Strand: Reverse
Name: secD
Synonym: Sfri_2700
Alternate gene names: NA
Gene position: NA
Preceding gene: 114563866
Following gene: 114563864
Centisome position: NA
GC content: NA
Gene sequence:
>1851_bases GTGTTAAATAAATACCCAATGTGGAAAAACATCATGGTGATGCTTGTCATTGCCATTGGTAGTTTTTATGCAATTCCAAA TTTGTTTGGTGAAGATCATGCAGTGCAGATTGTCGCGACTCGCGGCGCAGAAGTTACTGCATCGACACAAACGACTGTGG TTGATTTATTAGATAGTCAGGGTATTGCGGTAAAGCGTGCCGAGCTAGAAAATGGTCAGTTATTAGTCCGAGTGCAAAAT CCTGAGCAACAGTTAGTCGCTAAAGAAGCTATCGCTGAACTGCTTGGCCAGAAATATACCGTTGCGCTAAACTTAGCTCC GGCAACCCCTGAATGGCTTGAAGCTGTTGGTGGGTCACCGATGAAATTAGGTTTAGATTTACGTGGTGGTGTTCACTTCC TAATGGAAGTGGATATGGGCGAAGCTATTCGTAAAATGGAAGAAGCTAAGATAGCTGATTTCCGTAGCCAGCTTCGTGAA GAGAAAATTCGTTATGCTGGTATTCGTAAAACCCCTAAAGGGATTGCGATTAAGTTTCGAGATGCTGAAACGGTTGACCA AGCAGAGACTTATTTAAAAACCCGCAGCAATGACATGACCTATACCGATGCGAGTAGCGGTAATGAGTTTATGCTTCTTG CCACCATGAGTGATGCTTACCTTAAGCAAATTAAGGAAGAAGCACTGCAGCAAAACATTACCACTATTCGTAACCGTGTT AACGAGCTGGGTGTTGCTGAGCCAGTAGTACAACGTCAAGGCGCCGAGCGCATTATTGTTGAACTGCCAGGTGTACAAGA CACTGCTCGAGCAAAAGAAATTTTAGGTGCTACGGCATCAATTGAATTTCGTATGGTTGATGATAAGGCTGACGTAAGCG CAGCTGCAAATGGTCGTGTTCCTGCAGGCGCAGAAGTGTACCAACGCCGTGAAGGCGGGATTGCAGTATTGAAAAAAGAA GTGATGCTAACGGGTGATCATATCACTGGTGCACAACCTACTTTTGATGAATACAGTCGTCCACAGGTAGCGATTAATCT TGACGCAAAAGGCGGCTCGATTTTCTCTAACGTGACCAAAGACAATATCGGTAAACCAATGGCAACATTATTTATCGAAT ATAAAGACAGTGGTACACGTAATCCTGATGGCACAGTGAAAATGACTCGTATTGAAGAGGTTATTTCAGTTGCGACGATT CAGGCTCGTTTAGGCCGTAATTTTGTGATTACCGGTCTTGAGCACACTGAAGCACAAAGCCTAGCGTTATTATTACGTGC AGGTGCGTTGATTGCGCCAGTGACCATTGTGGAAGAAAGAACTATTGGCCCAAGCCTAGGTGCTGAAAACATCCAAAACG GTGTTCAAGCGATGATTTGGGGCATGGTTGTTGTTCTTGTATTTATGATGGTTTATTACCGTGCATTTGGTTTTATTGCC AACCTTGCATTGCTGGCAAACCTAATTATGGTTGTTGGTGTGATGTCTATGATCCCAGGTGCGGTATTAACCTTACCAGG TATTGCGGGCATGGTATTAACGGTGGGCATGGCGGTTGACGGTAACGTACTTATTTTTGAACGTATCCGTGAAGAACTTC TTGGCGGCCGCAGCGTGCAACAAGCTATCCATGAAGGTTATGGTAATGCTTTTTCAACCATTGCAGATGCTAACATCACT ACCTTTATGACAGCGTTAATCTTGTTTGCTGTCGGTACCGGTGCGGTGAAAGGCTTTGCTGTTACCTTAATGATAGGTAT CGCGACTTCGATGTTTACAGCCATTGTTGGCACACGCTCAATCGTGAATGCGGTTTGGGGTGGTAAGCGCGTTAAGTCAT TGTCTATCTAA
Upstream 100 bases:
>100_bases CGATTAATGATAACAACCAAATCACGATTAAAAAGGATTACATCGCAGCGGTATTGCCTAAAGGTTCTATCCAGTCGTTA TAAGCCAAGAGGGCTATGGT
Downstream 100 bases:
>100_bases GGGAGAAGTTGAACATGTTTCAGATATTTTCAGTAAAGAATACAGTCGACTTCCTTCGTCATGCATTTCCTATTAGTGTA ATGTCGTTGATCTTAGTTAT
Product: preprotein translocase subunit SecD
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>616_residues MLNKYPMWKNIMVMLVIAIGSFYAIPNLFGEDHAVQIVATRGAEVTASTQTTVVDLLDSQGIAVKRAELENGQLLVRVQN PEQQLVAKEAIAELLGQKYTVALNLAPATPEWLEAVGGSPMKLGLDLRGGVHFLMEVDMGEAIRKMEEAKIADFRSQLRE EKIRYAGIRKTPKGIAIKFRDAETVDQAETYLKTRSNDMTYTDASSGNEFMLLATMSDAYLKQIKEEALQQNITTIRNRV NELGVAEPVVQRQGAERIIVELPGVQDTARAKEILGATASIEFRMVDDKADVSAAANGRVPAGAEVYQRREGGIAVLKKE VMLTGDHITGAQPTFDEYSRPQVAINLDAKGGSIFSNVTKDNIGKPMATLFIEYKDSGTRNPDGTVKMTRIEEVISVATI QARLGRNFVITGLEHTEAQSLALLLRAGALIAPVTIVEERTIGPSLGAENIQNGVQAMIWGMVVVLVFMMVYYRAFGFIA NLALLANLIMVVGVMSMIPGAVLTLPGIAGMVLTVGMAVDGNVLIFERIREELLGGRSVQQAIHEGYGNAFSTIADANIT TFMTALILFAVGTGAVKGFAVTLMIGIATSMFTAIVGTRSIVNAVWGGKRVKSLSI
Sequences:
NA
Specific function: NA
COG id: COG0342
COG function: function code U; Preprotein translocase subunit SecD
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA