The gene/protein map for NC_008345 is currently unavailable.
Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114563794

GI number:

Start: 3143255

End: 3145861

Strand: Reverse

Name: Not Available

Synonym: Sfri_2628

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563795

Following gene: 114563793

Centisome position: NA

GC content: NA

Gene sequence:

>2607_bases
ATGCATAAGAACGTATTAGCTAAGTCGGTGCGCTTAGCACTGATCAGTGGTGCAGCAGCAGCCGCATTTGCTTCGCCAGC
AGTTTTTGCTGCTGATGAAGATGGCGCAAAAGTAGAGCGTATTGAGGTTACCGGTTCGCGTATTAAGCGTTCTGACCTTG
AAGGTGCTTCACCAATAACGACCATTACAACTGAAGATATGAAGATGGAAGGTAACTTTACAGTTGCTGACGCACTTCGT
AACAGTAACTTGAACTCTTTCGGTTCATTCTCTGAGCGTTCAGGTAGTTCTGCACAATCTCAAGCAACTATTAACCTACG
TGGTGCAGGCTCAAGCCGTACTCTAGTACTTATTGACGGTAAGCGTTTCCCAGGTTCACCAACGCTAGGTGGTGCATCTG
CTAACTTGAACGCTATTCCAATGGCTGCAGTTGAACGTATCGAAATTCTAACTGATGGTGCATCTTCAACTTATGGTTCT
GACGCGATTGCTGGTGTTGTTAACATCATCATGAAAAAGAACTATCAAGGTATTGAGTTCAATGTCGGTGGTGGTTCACG
TGACCGTGACGGCGGCTTAACGAGTAAAGAATTCTCGGTTGTTGCTGGCTATCAAATGGATAAAGGTAACATTACTTTTG
CATTTGATCATCAAGACCGAAAAGGCATTTCTGATGCAGACCGTGACTTTACTGCACCATGGATGGAAGACTTAAATGGT
GATGGCGTTATTCAAGCATATTCTGAGACTGATGGCTGGAGTTATTATGGCGCAAGCGTAAAAGGTCCTGATGGCATTTA
TCAGCCATCTCCGCTTTGTGGTGATTTAGCTGCTGAATATGGTGACAATGTATTTAAACAAGTACGTGGTGATGATCAAT
TTGGTGCTGGTTCAGATTTGTGTATGTATGCATATGGTAATGTGTCATATAACAAAGCCTCTACAGATCGCAATACGGTA
TATGTTGATGCTAACTATGAAATCGCTGAAGACTTAGAATGGTTTGGCCGAGTAATGGTTACACAAAGCAATTCATTTGG
TCGTTATGCACCTCCTGCAGCGAATTGGAATAACATGGCAGCAGATAACCCACATAACCCATTTGATGTAGAAGCAAAAG
GTTATTTCCGTTGGGTTGGTATCGGTACTCGTGATGGGAACGTAGATGATTACAACCAAGATTACCTAACTGGTTTACGT
GGTACAATCAGTGCGCTTAATGATGCAGAGTGGGAAGTTTACTACCACCACAACATTGCCGATAACAAATCTATCGGTGA
GTATTACTTAAGTTATTCAGGTCTTGCTTATAACGAAGCAAATGGTATTGATTTGGGTTCTGAAGCTGGCATCAATAACA
TGAAAGCCACCACTTTAACTCAAGGTAGTGCGATATTTGATCAATATAACGCTGGTATTGGTTTTGATGCGTTTGAATTA
CCAGGTGGTTCTGTAGCACATTATGTAGGTTTAGAATATTTTGACCAACAGTATAGTGAAGTGTATGACGCACAGTCAGA
AGCTGGTTTAATCGGTGGTAGTGCTGGTAACTCTGCAGCAGGCGACCGTCAAGTGTGGGCAATGTTTTACGAAGCGGTAT
TACCGATAACAGATGACATTGAATTAAACTTAGCGGCTCGTTACGATGATTACAGTGACTTTGGTGATAATATCGCACCT
AAAGCAGCTATACGCTGGCAAGCACTTGAAAATGTTGTTGTACGTGCATCATATTCAGAAGCTTTCCGTGCTCCAGCATT
GGATCAACTATTTGCAGCAACTACATTCAGTGCTGAAGATGGTATTGATAAACCATATTGTGAAGCAACTGGTACACCTT
GTTCTGAAAGACAGTTTGATACATATATTAGTGCAAACAAAGAACTTGGCCCAGAAACGTCTCAATATGTTAACTTCGGT
GTAGCATGGGATATCGTTGATGATATCGGCTTAAAAGTTGATTATTTTAACCTTAATATTGACGATGTAATTGCTCAACG
CTCAATTACAAGTGTTATGACTGGTATTTATGAAGGTACGTTGGCTCCTAGTAATACATTCTATGTAAAACGTGATCCAG
CAAGTGCAGGTCAAGCAATTGGTGCTGCATCTGAAGTCGGTACTGGTTATAGCAATGCTAATACCTTAGAAATTTCAGGT
ATCGATGTTGCGTTAAACGCAAAATTTGAAACCAATATCGGTGACATAGGCTTTAACTGGACAAATAGTTTTGTTCTTGA
TTATACCGAAGAAGTTGATGGTGGTGCTGAGTCACGTGATACTTCTGGTTGGAATGGTCAGCCAGATTACAAGTCTGTAT
TCACAACAAATTACCGCATGGGTGATCATAGTCTATCTTGGAACATGAATTACACTTCATCTACATTCTATTTTGAAGAT
GATGCTTCTAAAGGTGAGTTAGATTCATGGTTAATTCATAACATTAGTTATGTTTATGATGCTGGTAATTATGGTTCAAT
TTTATTAGGTATCAACAACCTAACTGATGAAGATCCTGTTCTTTCTCCTGATGGAAAGTTTGAGAACGCTGATCTATATA
ACAACTACGGTCGTGAGTATCGTGCAAGTTATACTCTTAAGTTCTAA

Upstream 100 bases:

>100_bases
TTGTGATTGTTTTTTGTTGCATCCCCTCATTGAACTAACACCTAAAAAGGTAGTTAGCATTAATTATAAGAAAGACATAA
AAAGTCCAGGGAGATAGACA

Downstream 100 bases:

>100_bases
ATACTAATTAGTCATTAATTAGATATAAGAAAGGCTCCTTCGGGAGCCTTTTTACTTGGTGTATTATAACAATATGATGT
GATTAATTGAGGAGTTTACA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>868_residues
MHKNVLAKSVRLALISGAAAAAFASPAVFAADEDGAKVERIEVTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALR
NSNLNSFGSFSERSGSSAQSQATINLRGAGSSRTLVLIDGKRFPGSPTLGGASANLNAIPMAAVERIEILTDGASSTYGS
DAIAGVVNIIMKKNYQGIEFNVGGGSRDRDGGLTSKEFSVVAGYQMDKGNITFAFDHQDRKGISDADRDFTAPWMEDLNG
DGVIQAYSETDGWSYYGASVKGPDGIYQPSPLCGDLAAEYGDNVFKQVRGDDQFGAGSDLCMYAYGNVSYNKASTDRNTV
YVDANYEIAEDLEWFGRVMVTQSNSFGRYAPPAANWNNMAADNPHNPFDVEAKGYFRWVGIGTRDGNVDDYNQDYLTGLR
GTISALNDAEWEVYYHHNIADNKSIGEYYLSYSGLAYNEANGIDLGSEAGINNMKATTLTQGSAIFDQYNAGIGFDAFEL
PGGSVAHYVGLEYFDQQYSEVYDAQSEAGLIGGSAGNSAAGDRQVWAMFYEAVLPITDDIELNLAARYDDYSDFGDNIAP
KAAIRWQALENVVVRASYSEAFRAPALDQLFAATTFSAEDGIDKPYCEATGTPCSERQFDTYISANKELGPETSQYVNFG
VAWDIVDDIGLKVDYFNLNIDDVIAQRSITSVMTGIYEGTLAPSNTFYVKRDPASAGQAIGAASEVGTGYSNANTLEISG
IDVALNAKFETNIGDIGFNWTNSFVLDYTEEVDGGAESRDTSGWNGQPDYKSVFTTNYRMGDHSLSWNMNYTSSTFYFED
DASKGELDSWLIHNISYVYDAGNYGSILLGINNLTDEDPVLSPDGKFENADLYNNYGREYRASYTLKF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA