| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
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Identifier: 114563392
GI number:
Start: 2656004
End: 2660851
Strand: Reverse
Name: Not Available
Synonym: Sfri_2221
Alternate gene names: NA
Gene position: NA
Preceding gene: 114563393
Following gene: 114563391
Centisome position: NA
GC content: NA
Gene sequence:
>4848_bases ATGGCCTTGAAAGATGCAATGCCTTCAGTACTACTGGAAAATGTAGTCAATTTAATTCACACAAAAATCCCTAATTCTCA AGCCAAACAAGTTGAGCAATTTGCTAATTGCCTCTATGCCCATATGTCAAAAGACGATCTCAATGCTCGTAATGACAGTG ATTTATATGGTGCTGTAGTGAGCCTTTGGAATGCGCTGAATAAAACGGCCCAGGATCAAACCCACATCCGTGTATTTAAT CCAAGCCAAGCAAAACATGGCTGGCAGTCAACTCACAGCATTATTGAGGTTATCCAACTTGATATGCCTTTCTTGGTTGA CTCGCTCTCAATGGCGTTAAATCGAATGGGTATCACTGCCCATGTGATGTTGCACACGCCATTAGCCGTAGTACGCGGTA ATAACAACAATGTATCTGATGTGTCATTTGTTAATGACACATCAGATAGCAGCAATAATGTTGCTGTATTTTTAGTCGAA ATTGACAAACAAAATAGTGATGCTGACATTAAGGCGATTGAAAAAGAAATTCAATCTGTTCTTGCTGATGTCTCTGCGTC GGTCAATGATTGGCAATTAATGTCAGATACATTAACCGATACTATTAAACAATTACCTTCACGTCCTTTCCCGGGTGATA AAACGGAACTGAAAGAGTCAGTTGATTTCTTAAACTACTTGAACAACCATCATTTCACTTTGCTTGGCTATCGTTATTAT GATCTAAAACGTGTTGAAGGTGATGTTGAGCTTGTTCCTAACATTGAATCTAGCTTAGGGCTAATGAACCGTTCAAAAAC CTCCCATAGTGAGCGTGGTTTATTACTTTCAAGTTTATCTGATTCAGCCCGTAAAGAGGCGTTAGATGAAAGCTTACTCG TTCTCACCAAAAGCTCTGCTAAAAGCCGTGTACATCGTCCAGCTTATGTAGATTATATTGGTGTTAAACGTTTTGACAAA AAAGGCAACGTAATTGGTGAAGATCGTTTCATTGGTTTATATGCTTCTAATCTTTATAACCGTAGTCCACGCGAAATCCC ATTATTGGGTGAAAAGGTTCAGCGCATTCTTGATAACTCAGGGCTAGCGCCGCGCTCTCATGATTATAAAGCGTTAATGA ATATTCTTGAGAACTTACCTCGTGATGAGCTAATTCAAGCTAAAGATCCTGAGCTATCAAACATCGCTCACGGTGTTTTA GAAATGCAAGATCGCGACAAGTTAAAGTTATTTGTGCGTAAAGACGGTTATGGCCGTTTCTTGTCGTGTTTAGTTTATGT GTCTAAAGACCGCTACAACACTAAATTACGTCAAGATACTCAACGCATTCTGGCACAACATTTTAAAAGTACAGAAGATG TTGAGTTCACCACGTACTTCTCAGAGTCTACATTGGCTCGAACTCACTATATTATCAAAGTTGATAATAACAATATGGAT GTTGATGTGGCCGCCATTGAAAGAAATCTTATCGAAGCTGCTCGCTCATGGGACGACAAACTGCACACCGCATTAAACAA TGCCGTTGGTGAGCAAGCTGGAACGGGACTGACAAAACGTTATTTAAATGCTTTCCCACCTAGTTATAAAGATGATGTGC TTCCAAGTTCAGCTGTTGTTGACATGCAGCACCTTGAAGCATTGGATGACGAACACAAATTAGGTATGTTGTTTTATCAA CCGCAAGAAACTGCATTGAATGACAATAAAGTCCGCCTGAAACTGTTCCATAAAGACGAGCCTATTCACTTGTCTGACGT ACTTCCAATGCTTGAAAACTTTGGTTTACGTGTGATTAATGAACGTCCATACGAAGTCAAAACTAATGATGGTGCGACAT TCTGGATTTTAGACTTCTTAATGACAGTGCAGGGTGCAGCGACAGAAAACTTAGCTGATAGCCAAGACCGTTTCCAAACG GCTTTATTGCAAGTGTGGCAGAAGAAGTTAGAAGACGACGGCTTTAACCGTATGGTACTGTCAACAGGCCTCAGTGGTCG TGAAGTGTCTATTTTGCGTGCTTATGCTAAGTACATGCGTCAAATTGATGCAACATTCAGTCAGTCGTACATCGAAGAAA CGTTTAGCCGTTATCCTAAATTAGCGGACTTATTGGTGAAAATGTTCATCCGTAAGTTTAACCCTAAACTAAAAACGCGC ACCTTAAGTAAGTTCCTTGAACAGGTGAACATACAACTTGATGACGTTTCAAGCTTAGATGATGACCGTATTATTCGTCG TTACTTGGATTTAATTAACGCCACATTACGAACTAACTTCTATCAAACTGCCATTGGCGGAAAAGCGAAAGACTATATCT CGTTTAAGTTTGCACCGGGCTTAATTCCTGAAATGCCTAAGCCGTTACCGAAGTTTGAAATATTCGTGTATTCGCCTCGT GTTGAAGGTGTGCATTTACGTGGCGGTAAAGTGGCTCGCGGTGGTTTACGTTGGTCAGATCGTCGTGAAGACTTCCGTAC CGAAGTATTAGGCTTAGTAAAAGCACAGCAAGTTAAAAACACCGTGATTGTGCCTGTGGGCGCAAAAGGTGGTTTTGTGT GTAAACAACTGCCGACAGAAGGTGGCCGCGAGGCATTATTTACGGAAGGACAAGAATGTTACCGTATCTTCATTCGTGCG TTATTAGATATTTCGGACAACATTGTTAATGGTGAAGTGGTTCCACCCGTAGATGTTGTACGTCATGATGAAGACGATCC ATATTTGGTCGTTGCAGCTGATAAAGGCACGGCAACATTCTCAGACATTGCTAACGCTATTGCGATTGAATACAACTTCT GGTTAGGCGATGCATTTGCCTCTGGTGGTAGTAACGGCTATGACCATAAAAAAATGGGCATTACTGCCCGTGGTGCGTGG GAGTCTGTTAAACGTCATTTCCGCGAAATTGGTGTTGATTGTCAAACCACTCCATTTAGTTGTGTGGCTATTGGTGACAT GGCTGGTGACGTATTTGGTAACGGTATGCTGCTATCTGAGCAAACTCAATTGGTTGCTGCATTTAACCATATGCACATCT TTATTGACCCTACGCCAAAAATTGCCGAAAGCTATGCTGAGCGTCAGCGTTTATTTGTACTACCACGCTCAAGCTGGGAA GACTATAACGCCAAACTGATTTCTAAAGGCGGCGGGATATTCTTACGTTCTGCTAAGTCAATTAAATTGACTCCAGAAAT CAAGCAGATGCTAGACACTGACAAAGACACCATGAACCCAACTGAACTGATGAAAGAACTACTGAAAATGCCAGTAGACT TGATTTGGAATGGTGGTATTGGTACCTACGTTAAGTCGAGCAAAGAATCGCATGCTGAAGTAGGTGACCGTGCAAACGAT ACCTTACGTGTAAATGGTAAAGAAGTACGTGCCAAAATCATTGGTGAAGGCGGTAACTTAGGTTGTACACAATTAGGCCG TATTGAATACTGTGCTAATGGTGGCCGTATGAATACTGACTTCGTCGATAACGTTGGCGGTGTTGATTGTTCAGACAACG AAGTTAACATCAAAATCTTCTTAAACACGTTAGTGGCAGAAGGTGAGTTAACGGTTAAACAGCGTAACCGTTTACTTGAA GATATGACTGACGAAGTCAGCGATATTGTGATTAAAGATTGTAAAGACCAAACCCGTACTATTTCGGTTACCCAAGTACA CGGTGTGTCACAACTTAAAGAGCAAATTCGTTTTATTCAGTATCTTGAAAAAGACGGTAAACTTGACCGCGCACTTGAGT TCTTGCCAACTGATGACGATTTAGCAGAACGTTTAGCCAACGGCCGTGCGTTAACGCGTCCAGAGTTATCGGTACTTGTT GCTTACGCTAAAATGGTGCTTAAAGAGCAACTAGTGACACCTGAAATCACTGAAGATGCATTTTTAAGCAAGCTATTAGT GGCTTATTTCCCTAAAAAGTTACAAGCAAAATACGCTGACAAAATGATCGCACATCCTCTACGTGGTGAAATTATTGCTA CCTCATTAGCCAATGAATTGGTGAATGATATGGGCTTTAATTTTGTACAACGTATGCAAGATGAGACCGGTGCAACAGTT GCCGAAGCGGCTATTTGTTACACTATGGCCCGAGAAATCTTTGGTCTTGATGAGTTAACCGCTTCTATTACTGACTTAAA CGGTGTTACTCCGGCACATGTGCAGGGTGAAATGCTACATCAGTTGCGTCGTAATATGCGTCGAGCATGTCGTTGGTTTA TTCGTCATCGCAATCGTGCTCATGATATTGATCAAACAGTGGCATTCTTTAAGCCTGTATTTGAACAGCTTAAAGCCAAT GTTGACCAGTATATGATTGCTGCTGAAGTGAAAGTGATTTCTGCTGAAATTACTGCACTAACGAAAGAGAATGTCCCTAA AGCAGTTGCACAAGTTGTCGCTAAAATGAGTACATTATTCTCTGCGTTAGACATTGCACAAATTGCTCAAATCGAGAATA AGTCAGTTGAGCTGGTATCAGAAACTTACTTCAAACTCGGTGCTAAAGTTGAATTACATTGGTTCTTAGAACAAATCAGT GCTCAACCTGTAGCTAACCATTGGCAAGCACTTGCTCGTGCTGCATTCAGAGAAGAACTTGATTGGCAACAACGTGCATT AAGTTCTGCAGTATTACGTACTTGTACAGATACTTGCGATGCAGATAGTGTTATCAATCAATGGATTACATTAAATAAAC CATTGCTTGAAAGATGGTATCACATGTTAGCGGACTTCAAGGTTTCTCAAACCCATGAATTTGCTAAGTTCTCAGTCGCC TTAAGAGAACTGAACTTGCTGATTTTGCATTGCGAAGGTCAGAAGTAG
Upstream 100 bases:
>100_bases ACGTGATAGACACAAAATGACTCGGACCGACTGAATCAACAAGCCGAAGCATCCATATAATGATAAGAGCGCTGCCATAG ACGCTTAAGGAATCTGCAAC
Downstream 100 bases:
>100_bases TTTTTATAATGTGAATAAGCCCTGGCAATTGCTGGGGTTTTTTTTAGGTCTAGGAGAAAACATGTTTTACAAACTCGCGC AAAAAGTAATGTTTCAGATG
Product: NAD-glutamate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1615_residues MALKDAMPSVLLENVVNLIHTKIPNSQAKQVEQFANCLYAHMSKDDLNARNDSDLYGAVVSLWNALNKTAQDQTHIRVFN PSQAKHGWQSTHSIIEVIQLDMPFLVDSLSMALNRMGITAHVMLHTPLAVVRGNNNNVSDVSFVNDTSDSSNNVAVFLVE IDKQNSDADIKAIEKEIQSVLADVSASVNDWQLMSDTLTDTIKQLPSRPFPGDKTELKESVDFLNYLNNHHFTLLGYRYY DLKRVEGDVELVPNIESSLGLMNRSKTSHSERGLLLSSLSDSARKEALDESLLVLTKSSAKSRVHRPAYVDYIGVKRFDK KGNVIGEDRFIGLYASNLYNRSPREIPLLGEKVQRILDNSGLAPRSHDYKALMNILENLPRDELIQAKDPELSNIAHGVL EMQDRDKLKLFVRKDGYGRFLSCLVYVSKDRYNTKLRQDTQRILAQHFKSTEDVEFTTYFSESTLARTHYIIKVDNNNMD VDVAAIERNLIEAARSWDDKLHTALNNAVGEQAGTGLTKRYLNAFPPSYKDDVLPSSAVVDMQHLEALDDEHKLGMLFYQ PQETALNDNKVRLKLFHKDEPIHLSDVLPMLENFGLRVINERPYEVKTNDGATFWILDFLMTVQGAATENLADSQDRFQT ALLQVWQKKLEDDGFNRMVLSTGLSGREVSILRAYAKYMRQIDATFSQSYIEETFSRYPKLADLLVKMFIRKFNPKLKTR TLSKFLEQVNIQLDDVSSLDDDRIIRRYLDLINATLRTNFYQTAIGGKAKDYISFKFAPGLIPEMPKPLPKFEIFVYSPR VEGVHLRGGKVARGGLRWSDRREDFRTEVLGLVKAQQVKNTVIVPVGAKGGFVCKQLPTEGGREALFTEGQECYRIFIRA LLDISDNIVNGEVVPPVDVVRHDEDDPYLVVAADKGTATFSDIANAIAIEYNFWLGDAFASGGSNGYDHKKMGITARGAW ESVKRHFREIGVDCQTTPFSCVAIGDMAGDVFGNGMLLSEQTQLVAAFNHMHIFIDPTPKIAESYAERQRLFVLPRSSWE DYNAKLISKGGGIFLRSAKSIKLTPEIKQMLDTDKDTMNPTELMKELLKMPVDLIWNGGIGTYVKSSKESHAEVGDRAND TLRVNGKEVRAKIIGEGGNLGCTQLGRIEYCANGGRMNTDFVDNVGGVDCSDNEVNIKIFLNTLVAEGELTVKQRNRLLE DMTDEVSDIVIKDCKDQTRTISVTQVHGVSQLKEQIRFIQYLEKDGKLDRALEFLPTDDDLAERLANGRALTRPELSVLV AYAKMVLKEQLVTPEITEDAFLSKLLVAYFPKKLQAKYADKMIAHPLRGEIIATSLANELVNDMGFNFVQRMQDETGATV AEAAICYTMAREIFGLDELTASITDLNGVTPAHVQGEMLHQLRRNMRRACRWFIRHRNRAHDIDQTVAFFKPVFEQLKAN VDQYMIAAEVKVISAEITALTKENVPKAVAQVVAKMSTLFSALDIAQIAQIENKSVELVSETYFKLGAKVELHWFLEQIS AQPVANHWQALARAAFREELDWQQRALSSAVLRTCTDTCDADSVINQWITLNKPLLERWYHMLADFKVSQTHEFAKFSVA LRELNLLILHCEGQK
Sequences:
NA
Specific function: NA
COG id: COG2902
COG function: function code E; NAD-specific glutamate dehydrogenase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA