| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
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Identifier: 114563334
GI number:
Start: 2579613
End: 2582129
Strand: Reverse
Name: Not Available
Synonym: Sfri_2163
Alternate gene names: NA
Gene position: NA
Preceding gene: 114563335
Following gene: 114563333
Centisome position: NA
GC content: NA
Gene sequence:
>2517_bases ATGACCACAGCGAAAGATAACGCCAGTGCTAATATCAGTAAAACCAATAGTAAAGTTGAAGTCACTGCCGAGATATTAAT AGACGAACAAGATTGTTCTCACGAAGAACCTTGCGATAGCTTAAAAGCCTTATTAGCAAGACATATGCGCTACGAGTTAT GTAGAGACGATCACGATAAACATGAATTGTTTAATGCCTTAGCACAAAGCGTTAAGGAACAAATGCTTGATGACTGGCGA CAAACACGGCTCAAGGATAATCAATATCAACAAAAACAAGTGGCCTATTTGTCATTAGAGTTTCTGATGGGCCGAGCATT AGGCAATGCATTATTAAGTTTAGACATTACCGAGGATGCTCAACAAGTACTCACAGAGTACGCCACTAATTTAGAACATA TTGAACAAGTTGAGCATGATGCAGGGTTAGGAAATGGTGGACTTGGACGTTTAGCGGCTTGTTTTCTCGACAGTTGTGCT AGTTTGGATTTACCCGTTACAGGTTATGGTATCCGATATCAATACGGCATGTTTGTACAAAAAATAATAGATGGTTATCA GGTAGAGCGACCCGATCGTTGGTTACGAAATGGTAATCCTTGGGAAGTCCGAATTTCTAATCATATTGTTTCTGTCCCTT TTTATGGTCATACCGAAACTCATTCTTTTAAGCAGGGACATCGGCATCATGTTTTGGTTAACACTCAAAAAGTATTAGCT ATTCCATATGATATGCCTATTCCTGGTTATAAAAATAATCGTATTAACACCTTACGTTTGTGGAAAGCGGAAGCCAATGA TGACTTCGATTTAGCAGAGTTTAACGAAGGTGATTATGCAGAAGCAGTAGCGACTAAAAACTTGGCTGAACAAATTACCA TGGTGTTGTATCCCAATGACGCTAGCGTTAATGGTAAAGAGTTACGGCTGAAGCAACAATATTTTTTATCTTCAGCCAGT TTACAGGACCTATTAATCCGTTATGTGAACAAGTTTGGTGAAGATTTTAGCCACTTCAGTGAGCTTAACGTAATGCAGCT TAACGATACTCATCCTAGCATTGCGGTGCCAGAATTGATGCGATTGTTGCTTGATCAATATGGCTTAAGTTGGGACGCTG CGTGGGCAATTACAAATCAGTCGATGGCATATACCAATCATACTTTATTGCCAGAGGCATTAGAGCGTTGGTCAGTTCCT ATGATGAAAAATATGCTTCCTCGTATTGTCGAAATCATATTTGAGATTAATGCACGGTATTTAGAGTTGGTGGCACATCA TTGGCCTGGTGACATTCAAAAGCTAACTGAGATGTCAATTATTGAAGAGGGCGGAGAACAGCAAGTTCGTATGGCCTACT TAGCCATCGTTGCCAGTTTCTCTGTTAATGGTGTGGCAGGGTTACATACTCAGTTACTCAAAGAGGGGTTATTTAATAAC TTCTATCAATTATGGCCTAACAAGTTTAATAACAAAACTAACGGTGTAACTCCTAGACGTTGGCTAGCATTTTGTAACCC TAAATTATCTTCGTTGATTTGTAGTCGTTTAGGCAATGATTGGATTAAGGATTTGTCACGGCTTAAGGGGCTAAATGACT GTATTAGTGACAAAGCATTTGTTAAAGAATGGGCCCTGGTAAAATTTGAGAATAAACAATCATTAACCCAATTTGTGAGA CAGCAGTGTGGCGTCGAATTTGATCCAAAGATGATGTTCGATGTGCAAGTTAAGCGTATTCACGAATACAAGCGCCAATT GATGAATATCCTACATGTTATCCATTTATATCGCCGTATTCTTAATGGAGACACGCAGGATATGGTGCCGCGTTGCGTGT TAATTGGTGGAAAAGCAGCCCCTGGGTATGCCATGGCAAAACAGATTATTAAATTGGCCAATAATGTAGCCCATATGGTG AATTCAGATCCTCTTGTTACGCCATATTTACGCATGGCATTTATACCTAACTATAACGTCAGTGCGATGGAGGAAATTTG TCCGGGCACTGATTTATCTGAGCAAATATCAACAGCTGGTAAAGAGGCTTCAGGTACAGGCAACATGAAATTCATGATGA ATGGTGCCTTGACCATTGGCACATTAGATGGCGCCAATATTGAAATGCTTGAAGAGGTTGGCCATGAAAACTTCTTCTTA TTTGGCTTAAATGCTAGCCAAGTAACGCAAGCTCGTATGGATTACCAACCTCAACACATTATTGATCATTCGCCAGCCTT TCAAGGGGTGATGAATATGTTAGAAAGTGGTCATTTTAATTTGGTCGAACCGGGGATTTTCGACAGCATTATTGCCTCGA TTATCGACCCTAATGATCAATGGATGACGGCCGCTGATTTTGACAGTTATTGCCAAGCACAAGCGCTGGTGGCAAAAACC TATCTTGATCAAGATAGTTGGCAAGAAATGAGTATTAAAAATACCGCTGCAAGCGGGCGTTTTTCAAGCGACAACACCAT AGCGGGCTACCGCGACGAAATTTGGATGAAAAAGTAA
Upstream 100 bases:
>100_bases ATACCCAAGAAAGTGAGCCTTCAGTGGATGAGGATCAGCAAGTCAGTTTAATGAGTCGTAGTTTAATGTTATTCCATACC GAGTTTACAAGGAGCAATTG
Downstream 100 bases:
>100_bases AACAGGGAAAGTGATGTGATGCCACAAATAAGATAAATCATGTATCAATGTTTATTTTTTAATGGCTATATTAAATAGCA AAATGGAGTCTGCTTATGAG
Product: glycogen/starch/alpha-glucan phosphorylases
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>838_residues MTTAKDNASANISKTNSKVEVTAEILIDEQDCSHEEPCDSLKALLARHMRYELCRDDHDKHELFNALAQSVKEQMLDDWR QTRLKDNQYQQKQVAYLSLEFLMGRALGNALLSLDITEDAQQVLTEYATNLEHIEQVEHDAGLGNGGLGRLAACFLDSCA SLDLPVTGYGIRYQYGMFVQKIIDGYQVERPDRWLRNGNPWEVRISNHIVSVPFYGHTETHSFKQGHRHHVLVNTQKVLA IPYDMPIPGYKNNRINTLRLWKAEANDDFDLAEFNEGDYAEAVATKNLAEQITMVLYPNDASVNGKELRLKQQYFLSSAS LQDLLIRYVNKFGEDFSHFSELNVMQLNDTHPSIAVPELMRLLLDQYGLSWDAAWAITNQSMAYTNHTLLPEALERWSVP MMKNMLPRIVEIIFEINARYLELVAHHWPGDIQKLTEMSIIEEGGEQQVRMAYLAIVASFSVNGVAGLHTQLLKEGLFNN FYQLWPNKFNNKTNGVTPRRWLAFCNPKLSSLICSRLGNDWIKDLSRLKGLNDCISDKAFVKEWALVKFENKQSLTQFVR QQCGVEFDPKMMFDVQVKRIHEYKRQLMNILHVIHLYRRILNGDTQDMVPRCVLIGGKAAPGYAMAKQIIKLANNVAHMV NSDPLVTPYLRMAFIPNYNVSAMEEICPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTLDGANIEMLEEVGHENFFL FGLNASQVTQARMDYQPQHIIDHSPAFQGVMNMLESGHFNLVEPGIFDSIIASIIDPNDQWMTAADFDSYCQAQALVAKT YLDQDSWQEMSIKNTAASGRFSSDNTIAGYRDEIWMKK
Sequences:
NA
Specific function: NA
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA