| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
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The map label for this gene is tolB
Identifier: 114562639
GI number:
Start: 1746083
End: 1747411
Strand: Direct
Name: tolB
Synonym: Sfri_1462
Alternate gene names: NA
Gene position: NA
Preceding gene: 114562638
Following gene: 114562640
Centisome position: NA
GC content: NA
Gene sequence:
>1329_bases ATGAATAATTTGGCTAAATGGCTAACACTGGTATTAATAGTGTTAACTACACCCGCTCGCGCAGCGTTAGATATTGTTAT TACAGAAGGGGTTGATGCAGCAAGACCAATTGCTGTAGTACCTTTTGTATGGCAAGGGCAAGGTCCCGCTCCTGCATCTA TTTCTGATGTGGTAGCATCTGATTTATCTCGCAGTGGTACATTTAAGACACTTGATGTTCGTGCATTGCCACAATCAACT ATTTCGTCTGTAAATGGTTTTACTGCTCAAAACTGGGCTAATGTAGAAGCTGAAGCGCTTGTAGTTGGTACGGTTAAGCC ATATGGAGCAGATCAATACCTAGTGAGTTTTGAGCTGATTGATTTAGTCAAAGCACAACTGCAAGCGGGTAAAGGGCCTC AGAATAACAATGAGTTATTACTTGAAAGCCGTGAAACGGTTATTAGTGCAAACCAATTTAGACAGTATAGCCATCGTATC AGTGATATTGTTTATGAAAAGCTCACCGGTATTCGTGGTGCATTTTTAACCCGTATCGCATATGTTGTGGTTAAACAAGG TCAAAAAGCACCTTACCATCTAATGATTGCGGATTACGACGGCTACAATGAACAAATGCTACTACGTTCACCAGAGCCCT TGATGTCACCAACTTGGTCTCCTGATGGGCGTCGTTTAGCCTATGTTAGTTTTGAAAATAGAAAAGCTGAAATCTTTGTT CAAGACATTTACAGCCAAACTCGTACATTAGTGAGTAGTTTTGACGGTATTAATGGTGCACCGGCTTTTTCTCCTGATGG GAAAAAATTAGCTGTTACACTGTCAAAAGATGGCCAACCAGAAATTTATGTCGTCGATATTGCCACTAAAGCAACTCGAC GTATTACAGAGCATTACGCAATTGATACAGAACCATCTTGGTTCCCAGACGGTAAATCAATTTTATTTACCTCTGAACGT GGTGGGAAACCACAGTTATATCGCGTAAGTTTAGATACAAATAAAGTCTCGCGTATGACTTTTGAAGGTGAATGGAACCT CGGCGGTTCAATTAGCCCAGATGGTCGTAGTATGATTTTTGTAAACCGTACTAACGGTAAATTCCATATTGCTAGAATGG ATCTTGCAACACGCTTTATGCAGGTGCTTTCATCAACTCAACTTGATGAATCACCAAGTGTTGCTCCAAATGGCACTATG GTTATCTACGGTACAACCCATCAAGGTAAACAAGTGTTAGCTGCTGTTTCTATGGACGGCAGATTTAAAGCAAGATTGCC TGTCGGCCAGGGCGAGGTGAAGTCACCCGCATGGTCTCCGTTTCTCTAA
Upstream 100 bases:
>100_bases GCTGTTTATCAGCAATTAAAAGAAATTAATTTAACCGTTTCACCGGAATTTAATTAATATAAATCGTATTTAATGATGGA ATGGAGTTAAAAGGAGTCAC
Downstream 100 bases:
>100_bases ATAGATATTGATAAGGATTTAAAATGGATCTGAATAAGTTGTTTAAAGCTATGTTGGTTGCAGTTCCGCTTATGGCACTG GGTGCCTGTAGCTCAACTTC
Product: translocation protein TolB
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>442_residues MNNLAKWLTLVLIVLTTPARAALDIVITEGVDAARPIAVVPFVWQGQGPAPASISDVVASDLSRSGTFKTLDVRALPQST ISSVNGFTAQNWANVEAEALVVGTVKPYGADQYLVSFELIDLVKAQLQAGKGPQNNNELLLESRETVISANQFRQYSHRI SDIVYEKLTGIRGAFLTRIAYVVVKQGQKAPYHLMIADYDGYNEQMLLRSPEPLMSPTWSPDGRRLAYVSFENRKAEIFV QDIYSQTRTLVSSFDGINGAPAFSPDGKKLAVTLSKDGQPEIYVVDIATKATRRITEHYAIDTEPSWFPDGKSILFTSER GGKPQLYRVSLDTNKVSRMTFEGEWNLGGSISPDGRSMIFVNRTNGKFHIARMDLATRFMQVLSSTQLDESPSVAPNGTM VIYGTTHQGKQVLAAVSMDGRFKARLPVGQGEVKSPAWSPFL
Sequences:
NA
Specific function: NA
COG id: COG0823
COG function: function code U; Periplasmic component of the Tol biopolymer transport system
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA