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The map label for this gene is bfrD [H]

Identifier: 114331712

GI number: 114331712

Start: 1828127

End: 1830139

Strand: Direct

Name: bfrD [H]

Synonym: Neut_1732

Alternate gene names: 114331712

Gene position: 1828127-1830139 (Clockwise)

Preceding gene: 114331711

Following gene: 114331713

Centisome position: 68.7

GC content: 53.55

Gene sequence:

>2013_bases
ATGACAGTCACTGGCGCCCCTGCTTATCCCGAATCGAGTGGCTACACTACTAACCGCGCTAACAGCCTCACCAGGACGGA
TCTGCCTCTGAGCGACATCCCCGCCTCAATCCAGGTGGTACCGCATGAAGTGTTGCGCGACCGCGCAGTGACCCAGCCCG
GCCAACTGCTAGAAAACGTCAGCGGTGTGCAGACCGAAGCCAGCTACGGTGGGAATCACGGAATGTTCTTCAATATACGT
GGCTTCACGACCCACAGCAGCAGTCGCGATGGATTCCAATACAACGGCAACCTGGTTACCCGCGATGTGCAGAACATCGA
ACGGATCGAAGTGATGAAAGGGCCGTCCGGTACGCTCTACGGCGGCGTTGGTTCGCTAGGTGGCCAAGTTAACACGGTTT
CAAAACGACCGCTCTACTACAATTATGGTGCAATCAATCTGCTGTGGGGGAATTACCAGCAATGGCGACCGACCTTTGAC
ATCAACCGTGTCCTGGGTAAGGGTTTTTCCGTGAGATTGAACGGTGCGTACGAGAACAACGGTACCTTTCGTGATGGTGG
TGGATTCGAATCATATTCCCTAGCCCCGGCAATATCCTGGCAAGGGGAAAAAACCAGTGTCACGTTATTAGCGGAATACA
ATCGCTTCGACCAGGATCTATTCGACTTCGGCCTGCCTAATCTGCCGAACTTCCGTCACCTCTCCCGTACCCGTTACTTC
GGGCTGCGCAAAGGAGACTACCCTGACCTTCCAGGCGATAGCGGACTCAACGAGACTTACGTGGGTACTGCTATTCTCCA
TCACCAGCTGAGCCAGACCTGGGGCCTTCGGATCGCCACACAGTACCATAGAGCCACTCAGGATTCGACCCAGTCCTTTC
CTGACAACTACCTGTACACTGGCGACAATAAGCTACACTTCACCCATTACATGAATGGCCATGAGTGGTCTCGCGGACAC
GCTGTGCAAGCTGAGTTGCGCGGACAGGTCTATACCTGGAACTTTGAGCACAACTTGCTGTTCGGCACGGAATACAGAAA
GATCGTAAACGGGTTTAACAATACCGACCAAACGAGTTTTGTCCTCGACCTGTTTGATCCTGGCATGCGCTCTGCTCATC
ACGAGCCCATCATTCCTGGTGAAGGTTATAACGAGGGCCGGGGAGACGATATTGGAATTTATGCACAGGACCTATTGACA
CTGACATCTGCGGTGAAGTTGTTAGCTGGTCTTCGACTGGATCGTTTCCATAACGAAGCCAAGAGCAGTGATTATACGAA
TAGCGCGAACCAGATGGCGCTGTCTTGGCAGGTCGGTGCGGTGTGGGAATTAAATCCGACAGCTGCGTTGTTCACCCGTG
TGGGTCGGTCGCACTCGCCAAATATTACACGCAGTATCGATGCCAGCGTGTTTAACGCCGAAGTTGGTACCCAGAAAGAA
ATTGGTGCCAAATTTAACTTTTTTGACCGGCGACTGAACGCTACGCTAGCAGCCTACAAGCTAACCCGTCGTCACATTCT
TACCAGCGATCCGAACGACCCTCTACGAAACATCCTTGCAGGACGTCAATCTAGCCACGGCTTCGAACTTGATGTCAGTG
GTGAGTTGACACGGCGCTGGAAGGTAATTGCCAGCTATGCCTATACCCACGCCGAAGTGAAAGCGGATGGCTTCTTCCCG
GTCGGCGATAAGCTGCCCGATGTCCCTCGGCACAGCGGCAATCTGTGGACGACCTACGAACCCGGTGGTGTTCTGCAAGG
CCTCGGTGTGGGCGGTGGCATCTATGCTGCCTCATCGCGCCAGGCAACTCTGCCGAATTCCCACAAACTGGGGGCCTACG
TACGCATGGATACCACCGCCTACTACGACACTGGTAACTGGCATGCCCAATTTAACGTCAACAATCTGTTCGACACCAAG
TACTACTACGGCGGCGCGAGTGGTGTCTACAACTACACCCTAATCCCCAATCCACCGCGCACATTTTTACTAACGCTATC
TTACCGCTTATGA

Upstream 100 bases:

>100_bases
ACAGGAGACTGCAGATGGTTCCGAGGGAAAGGATGCTGGGCAGGTAGCTCGTGATGTAGAAGTGGCAGTACCCACTGGGT
ATGTCACGCAGTTGCCGGCG

Downstream 100 bases:

>100_bases
GTCGGATGCTGGTGTTTACTCGATTACGATCTGAATGAAACCAGCATCGCTCTGCTTCCACATTCATCTCGTGGTGCAAA
TAGCATGGTGGATTCAATCA

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 670; Mature: 669

Protein sequence:

>670_residues
MTVTGAPAYPESSGYTTNRANSLTRTDLPLSDIPASIQVVPHEVLRDRAVTQPGQLLENVSGVQTEASYGGNHGMFFNIR
GFTTHSSSRDGFQYNGNLVTRDVQNIERIEVMKGPSGTLYGGVGSLGGQVNTVSKRPLYYNYGAINLLWGNYQQWRPTFD
INRVLGKGFSVRLNGAYENNGTFRDGGGFESYSLAPAISWQGEKTSVTLLAEYNRFDQDLFDFGLPNLPNFRHLSRTRYF
GLRKGDYPDLPGDSGLNETYVGTAILHHQLSQTWGLRIATQYHRATQDSTQSFPDNYLYTGDNKLHFTHYMNGHEWSRGH
AVQAELRGQVYTWNFEHNLLFGTEYRKIVNGFNNTDQTSFVLDLFDPGMRSAHHEPIIPGEGYNEGRGDDIGIYAQDLLT
LTSAVKLLAGLRLDRFHNEAKSSDYTNSANQMALSWQVGAVWELNPTAALFTRVGRSHSPNITRSIDASVFNAEVGTQKE
IGAKFNFFDRRLNATLAAYKLTRRHILTSDPNDPLRNILAGRQSSHGFELDVSGELTRRWKVIASYAYTHAEVKADGFFP
VGDKLPDVPRHSGNLWTTYEPGGVLQGLGVGGGIYAASSRQATLPNSHKLGAYVRMDTTAYYDTGNWHAQFNVNNLFDTK
YYYGGASGVYNYTLIPNPPRTFLLTLSYRL

Sequences:

>Translated_670_residues
MTVTGAPAYPESSGYTTNRANSLTRTDLPLSDIPASIQVVPHEVLRDRAVTQPGQLLENVSGVQTEASYGGNHGMFFNIR
GFTTHSSSRDGFQYNGNLVTRDVQNIERIEVMKGPSGTLYGGVGSLGGQVNTVSKRPLYYNYGAINLLWGNYQQWRPTFD
INRVLGKGFSVRLNGAYENNGTFRDGGGFESYSLAPAISWQGEKTSVTLLAEYNRFDQDLFDFGLPNLPNFRHLSRTRYF
GLRKGDYPDLPGDSGLNETYVGTAILHHQLSQTWGLRIATQYHRATQDSTQSFPDNYLYTGDNKLHFTHYMNGHEWSRGH
AVQAELRGQVYTWNFEHNLLFGTEYRKIVNGFNNTDQTSFVLDLFDPGMRSAHHEPIIPGEGYNEGRGDDIGIYAQDLLT
LTSAVKLLAGLRLDRFHNEAKSSDYTNSANQMALSWQVGAVWELNPTAALFTRVGRSHSPNITRSIDASVFNAEVGTQKE
IGAKFNFFDRRLNATLAAYKLTRRHILTSDPNDPLRNILAGRQSSHGFELDVSGELTRRWKVIASYAYTHAEVKADGFFP
VGDKLPDVPRHSGNLWTTYEPGGVLQGLGVGGGIYAASSRQATLPNSHKLGAYVRMDTTAYYDTGNWHAQFNVNNLFDTK
YYYGGASGVYNYTLIPNPPRTFLLTLSYRL
>Mature_669_residues
TVTGAPAYPESSGYTTNRANSLTRTDLPLSDIPASIQVVPHEVLRDRAVTQPGQLLENVSGVQTEASYGGNHGMFFNIRG
FTTHSSSRDGFQYNGNLVTRDVQNIERIEVMKGPSGTLYGGVGSLGGQVNTVSKRPLYYNYGAINLLWGNYQQWRPTFDI
NRVLGKGFSVRLNGAYENNGTFRDGGGFESYSLAPAISWQGEKTSVTLLAEYNRFDQDLFDFGLPNLPNFRHLSRTRYFG
LRKGDYPDLPGDSGLNETYVGTAILHHQLSQTWGLRIATQYHRATQDSTQSFPDNYLYTGDNKLHFTHYMNGHEWSRGHA
VQAELRGQVYTWNFEHNLLFGTEYRKIVNGFNNTDQTSFVLDLFDPGMRSAHHEPIIPGEGYNEGRGDDIGIYAQDLLTL
TSAVKLLAGLRLDRFHNEAKSSDYTNSANQMALSWQVGAVWELNPTAALFTRVGRSHSPNITRSIDASVFNAEVGTQKEI
GAKFNFFDRRLNATLAAYKLTRRHILTSDPNDPLRNILAGRQSSHGFELDVSGELTRRWKVIASYAYTHAEVKADGFFPV
GDKLPDVPRHSGNLWTTYEPGGVLQGLGVGGGIYAASSRQATLPNSHKLGAYVRMDTTAYYDTGNWHAQFNVNNLFDTKY
YYGGASGVYNYTLIPNPPRTFLLTLSYRL

Specific function: Probably involved in iron transport [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=725, Percent_Identity=26.2068965517241, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1787024, Length=712, Percent_Identity=26.685393258427, Blast_Score=148, Evalue=1e-36,
Organism=Escherichia coli, GI1787344, Length=717, Percent_Identity=22.0362622036262, Blast_Score=111, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 74769; Mature: 74638

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTGAPAYPESSGYTTNRANSLTRTDLPLSDIPASIQVVPHEVLRDRAVTQPGQLLENV
CCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCEEEECCHHHHHHHCCCCHHHHHHHC
SGVQTEASYGGNHGMFFNIRGFTTHSSSRDGFQYNGNLVTRDVQNIERIEVMKGPSGTLY
CCCEEECCCCCCCCEEEEEEEEEECCCCCCCEEECCEEEECCHHCCEEEEEEECCCCCEE
GGVGSLGGQVNTVSKRPLYYNYGAINLLWGNYQQWRPTFDINRVLGKGFSVRLNGAYENN
CCHHCCCCEEEEEECCCEEEECCEEEEEECCCHHCCCCCCHHHHHCCCEEEEEEEEECCC
GTFRDGGGFESYSLAPAISWQGEKTSVTLLAEYNRFDQDLFDFGLPNLPNFRHLSRTRYF
CCCCCCCCCCCEECCEEEECCCCCEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHEE
GLRKGDYPDLPGDSGLNETYVGTAILHHQLSQTWGLRIATQYHRATQDSTQSFPDNYLYT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEHHHHHCCCHHHCCCCCEEEE
GDNKLHFTHYMNGHEWSRGHAVQAELRGQVYTWNFEHNLLFGTEYRKIVNGFNNTDQTSF
CCCEEEEEEECCCCCCCCCCEEEEEECCEEEEEEECCCEEECHHHHHHHCCCCCCCCCEE
VLDLFDPGMRSAHHEPIIPGEGYNEGRGDDIGIYAQDLLTLTSAVKLLAGLRLDRFHNEA
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHH
KSSDYTNSANQMALSWQVGAVWELNPTAALFTRVGRSHSPNITRSIDASVFNAEVGTQKE
CCCCCCCCCCEEEEEEEECEEEECCCHHHHHHHHCCCCCCCCEEECCCEEEECCCCCCHH
IGAKFNFFDRRLNATLAAYKLTRRHILTSDPNDPLRNILAGRQSSHGFELDVSGELTRRW
HCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHH
KVIASYAYTHAEVKADGFFPVGDKLPDVPRHSGNLWTTYEPGGVLQGLGVGGGIYAASSR
EEHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCC
QATLPNSHKLGAYVRMDTTAYYDTGNWHAQFNVNNLFDTKYYYGGASGVYNYTLIPNPPR
CCCCCCCCCCEEEEEECCEEEEECCCEEEEEECCCEECCCEEECCCCCEEEEEECCCCCC
TFLLTLSYRL
EEEEEEEECC
>Mature Secondary Structure 
TVTGAPAYPESSGYTTNRANSLTRTDLPLSDIPASIQVVPHEVLRDRAVTQPGQLLENV
CCCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCEEEECCHHHHHHHCCCCHHHHHHHC
SGVQTEASYGGNHGMFFNIRGFTTHSSSRDGFQYNGNLVTRDVQNIERIEVMKGPSGTLY
CCCEEECCCCCCCCEEEEEEEEEECCCCCCCEEECCEEEECCHHCCEEEEEEECCCCCEE
GGVGSLGGQVNTVSKRPLYYNYGAINLLWGNYQQWRPTFDINRVLGKGFSVRLNGAYENN
CCHHCCCCEEEEEECCCEEEECCEEEEEECCCHHCCCCCCHHHHHCCCEEEEEEEEECCC
GTFRDGGGFESYSLAPAISWQGEKTSVTLLAEYNRFDQDLFDFGLPNLPNFRHLSRTRYF
CCCCCCCCCCCEECCEEEECCCCCEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHEE
GLRKGDYPDLPGDSGLNETYVGTAILHHQLSQTWGLRIATQYHRATQDSTQSFPDNYLYT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEHHHHHCCCHHHCCCCCEEEE
GDNKLHFTHYMNGHEWSRGHAVQAELRGQVYTWNFEHNLLFGTEYRKIVNGFNNTDQTSF
CCCEEEEEEECCCCCCCCCCEEEEEECCEEEEEEECCCEEECHHHHHHHCCCCCCCCCEE
VLDLFDPGMRSAHHEPIIPGEGYNEGRGDDIGIYAQDLLTLTSAVKLLAGLRLDRFHNEA
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHH
KSSDYTNSANQMALSWQVGAVWELNPTAALFTRVGRSHSPNITRSIDASVFNAEVGTQKE
CCCCCCCCCCEEEEEEEECEEEECCCHHHHHHHHCCCCCCCCEEECCCEEEECCCCCCHH
IGAKFNFFDRRLNATLAAYKLTRRHILTSDPNDPLRNILAGRQSSHGFELDVSGELTRRW
HCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHH
KVIASYAYTHAEVKADGFFPVGDKLPDVPRHSGNLWTTYEPGGVLQGLGVGGGIYAASSR
EEHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCC
QATLPNSHKLGAYVRMDTTAYYDTGNWHAQFNVNNLFDTKYYYGGASGVYNYTLIPNPPR
CCCCCCCCCCEEEEEECCEEEEECCCEEEEEECCCEECCCEEECCCCCEEEEEECCCCCC
TFLLTLSYRL
EEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]