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The map label for this gene is oprJ [H]

Identifier: 114331710

GI number: 114331710

Start: 1826850

End: 1827272

Strand: Direct

Name: oprJ [H]

Synonym: Neut_1730

Alternate gene names: 114331710

Gene position: 1826850-1827272 (Clockwise)

Preceding gene: 114331709

Following gene: 114331711

Centisome position: 68.65

GC content: 58.39

Gene sequence:

>423_bases
ATGCTTCCCGTACTCCCGCCACAACTACCGGCCGGACTGCCTTCCGAACTACTGACCCCGCGCCCTGATCTACTGGCTTC
ATTTGCACGACTGCGCGCGACCGATGCCTGTCTGGACAGCGCGTTACCTCCCATCATGTTCACTGCTGCTGGAGGCACAC
GCGACCAGGCACTGACCAATCTGATTGACCCGAACTCGCTCGTCTGGAATTTGTTTGCCGGCGCGTTCCAGCCGCTATTC
ACCGGTGGACATGTTCGCGGCGGCATCGCATTGGCTCAGGCACGGGCAACCGAAACCCTGCACCGTTATAAGGAAACTGT
GCTCAATGCGTTCGTGAAGTTGAACAGGCGTTGGCAGCAGAAGAATGACTGCGTACGCAGGAAACCCAATTGCGCGCCGC
TGTGCAGCAGACGGAAACTATAG

Upstream 100 bases:

>100_bases
TTATCCGTCAGCCGGAGATTCTGCTGGGTGTTATCCGGAAGGCGCGATTCCTGCCATCGACACGGCGGTGGTAACCTTAT
CCGCTTCAACTGTCTAGCAG

Downstream 100 bases:

>100_bases
CTGACAACTAGCGCTGTATGCCTATCGGCAGGGATTTATTCAGATCCTGACATTGCTGGACAGTTACCGCAGTACATTCA
ATGCACAAAGCGCCAATCTG

Product: Outer membrane protein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLPVLPPQLPAGLPSELLTPRPDLLASFARLRATDACLDSALPPIMFTAAGGTRDQALTNLIDPNSLVWNLFAGAFQPLF
TGGHVRGGIALAQARATETLHRYKETVLNAFVKLNRRWQQKNDCVRRKPNCAPLCSRRKL

Sequences:

>Translated_140_residues
MLPVLPPQLPAGLPSELLTPRPDLLASFARLRATDACLDSALPPIMFTAAGGTRDQALTNLIDPNSLVWNLFAGAFQPLF
TGGHVRGGIALAQARATETLHRYKETVLNAFVKLNRRWQQKNDCVRRKPNCAPLCSRRKL
>Mature_140_residues
MLPVLPPQLPAGLPSELLTPRPDLLASFARLRATDACLDSALPPIMFTAAGGTRDQALTNLIDPNSLVWNLFAGAFQPLF
TGGHVRGGIALAQARATETLHRYKETVLNAFVKLNRRWQQKNDCVRRKPNCAPLCSRRKL

Specific function: Channel-forming component of a multidrug resistance efflux pump [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 15399; Mature: 15399

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVLPPQLPAGLPSELLTPRPDLLASFARLRATDACLDSALPPIMFTAAGGTRDQALTN
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
LIDPNSLVWNLFAGAFQPLFTGGHVRGGIALAQARATETLHRYKETVLNAFVKLNRRWQQ
HCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNDCVRRKPNCAPLCSRRKL
HHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPVLPPQLPAGLPSELLTPRPDLLASFARLRATDACLDSALPPIMFTAAGGTRDQALTN
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
LIDPNSLVWNLFAGAFQPLFTGGHVRGGIALAQARATETLHRYKETVLNAFVKLNRRWQQ
HCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNDCVRRKPNCAPLCSRRKL
HHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8878035; 10984043 [H]