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The map label for this gene is insF1 [C]

Identifier: 114331702

GI number: 114331702

Start: 1817626

End: 1818228

Strand: Direct

Name: insF1 [C]

Synonym: Neut_1720

Alternate gene names: 114331702

Gene position: 1817626-1818228 (Clockwise)

Preceding gene: 114331701

Following gene: 114331703

Centisome position: 68.3

GC content: 55.72

Gene sequence:

>603_bases
ATGGCCGCAAAACCGGACGAGCAGGAATTGGCACTGCTGGGACTGATTGACGCCGAATACACACGTCATCCGTTTTACGG
CAGCCGCAAGATCAAGCATTATCTGCGTGGTTTAGGTTACAAGATCAACCGCAAGCGCGTACAGAGGTTGATGGGCATAC
TGGGCCTTGCCGGCATGGCGCCGGGGCCGAATACCAGCCGCCCGCACCCGCAGCACAAAGTTTATCCGTACCTGCTCAGA
GGCGTGAATGTGATCCGCCCCAATCAGGTATGGAGTACGGACATCACATACATCCGCTTGGCACGCGGGTTCGTGTACTT
GGTGGCCGTGATCGACTGGTACTCGCGTAAAGTGCTGTCGTGGCGGTTATCGAATACGCTGGATAGCGGATTCTGTGTGG
ACTGCCTGGAGCAGGCATTGCAGACATATGGAACGCCCGAGATATTCAACACCGATCAGGGCTGCCAGTTCACCAGCGAA
GCTTTTACTGGCGTGCTGTTAAAAAAAGAAATCGCCATCAGCATGGACGGGCGTGGCCGGGCCTGGATAACATCTTTGTG
GAACGGCTCTGGCGCAGCGTCAAACACGAGGACGTGTATCTGA

Upstream 100 bases:

>100_bases
AGAAAACCGCAAGCAATGGGTCAGCGCCATCGAACCACTGGCGCTGACCCGGCAATGCGAACTGGCGGGAGTTAACCGCT
CCACGGTCTATGCGCCGCAC

Downstream 100 bases:

>100_bases
AAGGTTACGTCACGATGCCTGAATTGCTGATAGGTCTGACAGAATACTTTGTGCTTTACAACACAGAAAGACCGCACCAA
TCGCTGGGCTACGACACGCC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MAAKPDEQELALLGLIDAEYTRHPFYGSRKIKHYLRGLGYKINRKRVQRLMGILGLAGMAPGPNTSRPHPQHKVYPYLLR
GVNVIRPNQVWSTDITYIRLARGFVYLVAVIDWYSRKVLSWRLSNTLDSGFCVDCLEQALQTYGTPEIFNTDQGCQFTSE
AFTGVLLKKEIAISMDGRGRAWITSLWNGSGAASNTRTCI

Sequences:

>Translated_200_residues
MAAKPDEQELALLGLIDAEYTRHPFYGSRKIKHYLRGLGYKINRKRVQRLMGILGLAGMAPGPNTSRPHPQHKVYPYLLR
GVNVIRPNQVWSTDITYIRLARGFVYLVAVIDWYSRKVLSWRLSNTLDSGFCVDCLEQALQTYGTPEIFNTDQGCQFTSE
AFTGVLLKKEIAISMDGRGRAWITSLWNGSGAASNTRTCI
>Mature_199_residues
AAKPDEQELALLGLIDAEYTRHPFYGSRKIKHYLRGLGYKINRKRVQRLMGILGLAGMAPGPNTSRPHPQHKVYPYLLRG
VNVIRPNQVWSTDITYIRLARGFVYLVAVIDWYSRKVLSWRLSNTLDSGFCVDCLEQALQTYGTPEIFNTDQGCQFTSEA
FTGVLLKKEIAISMDGRGRAWITSLWNGSGAASNTRTCI

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=166, Percent_Identity=34.9397590361446, Blast_Score=97, Evalue=1e-20,
Organism=Escherichia coli, GI1788405, Length=172, Percent_Identity=31.3953488372093, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1787263, Length=172, Percent_Identity=31.3953488372093, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1786753, Length=172, Percent_Identity=31.3953488372093, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1786570, Length=172, Percent_Identity=31.3953488372093, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1786490, Length=172, Percent_Identity=31.3953488372093, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1789981, Length=158, Percent_Identity=31.6455696202532, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 22558; Mature: 22427

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKPDEQELALLGLIDAEYTRHPFYGSRKIKHYLRGLGYKINRKRVQRLMGILGLAGMA
CCCCCCHHHEEEEEEHHCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PGPNTSRPHPQHKVYPYLLRGVNVIRPNQVWSTDITYIRLARGFVYLVAVIDWYSRKVLS
CCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WRLSNTLDSGFCVDCLEQALQTYGTPEIFNTDQGCQFTSEAFTGVLLKKEIAISMDGRGR
HHHHCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCEEHHHHHHHHHHHHEEEEEECCCCC
AWITSLWNGSGAASNTRTCI
EEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
AAKPDEQELALLGLIDAEYTRHPFYGSRKIKHYLRGLGYKINRKRVQRLMGILGLAGMA
CCCCCHHHEEEEEEHHCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PGPNTSRPHPQHKVYPYLLRGVNVIRPNQVWSTDITYIRLARGFVYLVAVIDWYSRKVLS
CCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WRLSNTLDSGFCVDCLEQALQTYGTPEIFNTDQGCQFTSEAFTGVLLKKEIAISMDGRGR
HHHHCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCEEHHHHHHHHHHHHEEEEEECCCCC
AWITSLWNGSGAASNTRTCI
EEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]