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The map label for this gene is pchF [H]

Identifier: 114331641

GI number: 114331641

Start: 1740630

End: 1742198

Strand: Reverse

Name: pchF [H]

Synonym: Neut_1656

Alternate gene names: 114331641

Gene position: 1742198-1740630 (Counterclockwise)

Preceding gene: 114331642

Following gene: 114331638

Centisome position: 65.47

GC content: 47.8

Gene sequence:

>1569_bases
ATGAATGAGCAAAACCATGATGTGTTGCCTCGTGGTGTTTCCCAGCAGGAATTTCAGAAAGCTATTGAAGCATTCCAAAA
ATTGTTGGGTGATAAAAATGTATTGACCAGACCAGAACAGCTCATTGCCTACACAAAAATCATGATGCCGGTAGATGATG
CCGAGCATGCGCCATCAGCTACTTTGGTCGCAACGACTGTGAAACAAGTTCAAGAGGTTGTCAAAATCTGCAACACATAC
AAGATCCCAATCTGGACCATTTCTACTGGTCGCAATTTCGGTTATGGCTCTGCTGCACCACACCATCGTGGCCAGGTGAT
ACTTGATCTCAAAAAAATGAATAAAATCATTCATGTTGATCCAGAACTATGCACTGCGCTGGTTGAGCCTGGGGTGACCT
ATGGGCAGTTATATGACTACCTTCAGGAAAATAATTTGCCTCTGATGTTGTCATTTTCCGCACCATCGGCGATTGCCGGG
CCAGTTGGCAATACCATGGATCGTGGTGTCGGCTATACGCCGTACGGTGAGCATTTTATGATGCAGTGTGGTATGGAATT
GGTATTAGCTAACGGTGAAGTACTGAGAACTGGTATGGGGGGTGTCAAGGGGGATAACAGCTGGCAGGTATTCAAGTGGG
GCTACGGCCCGACTCTGGATGGCATGTTTACCCAAGCCAATTATGGCATTTGTACCAAGATGGGCTTCTGGCTGATGCCT
AGGCCCCCAGTAATCAAGCCATTCGAGATCAGGTACGAACATGAATCCGATATTGCTGATATTGTTGAACTACTGCGTCC
ATTGCGGATTACCCAGGTCATTCCAAACTCGGTGGTAATTGCTAATGTTTTGTGGGAGGCGGGAAGTGCCAACGTACGTC
GCTCCGAATACATGACCGGGCGTGGAGCGACACCGGATTCAGTACTCAAGCAGATTCAGCATGATAAAAATCTGGGTGCC
TGGAACGTTTATGCCGCATTGTACGGCACTCAGGAACAGGTTGACGTTAACTGGAAGATCGTCACCGAAACAATTAAAAA
ATCAGGTAAGGGCACGATCATTACTCAGGAGGAAGCAGGCGATACTCAGCCGTTCAAGTATCGTGCCGAGCTGATGTCCG
GTGTGCCTAATCTGCAGGAATTCGGATTGTACAACTGGCGTGGAGGTGGCGGCTCCATGTGGTTTGCACCGGTTAGCCAG
GCCCGTGGCAATGAATGTGACAAACAGAAGACGCTGGCCAAAAAAATCCTCAACAAACACGGTTTGGATTACGTGGGTGA
ATTCATTGTCGGTTGGCGCGATATGCATCATGTCATCGATGTGCTGTACGATCGCACCAGTAGGGAAGAAACCGAATCTG
CTTATCGGTGTTTTCATGAACTGATCAATGAATTCGAAAAAGAGGGATATGCCGTCTACCGCGTCAATACTGCCTTTATG
GAGCGTGTCGCACAAAGCTATGGTCCAGTAAAGCGTCGGGTCGAACACGCAATTAAACGAGCGCTCGATCCAAATAATAT
CTTGGCGCCGGGTAAATCTGGAATCGATCTCGATACTTTCGAAGAATGA

Upstream 100 bases:

>100_bases
TGGTTGATTTTTCGGAGGCTCCACAGATTAACAGCGGGTCGGTAGCGCCGCTGAATGGACACTTCGTTTCCTTTGCCTTT
AAGATTCAAGGAGTTTCAAT

Downstream 100 bases:

>100_bases
TGATTGCTGCCGCGCGGATTGCAATCTACGAAACAGGTGAAGCTGTTTTTTTGATCAGAGTGAACAGTAGTCGTATGAAA
GAGATACGCAGGTTGTTTCT

Product: 4-cresol dehydrogenase (hydroxylating)

Products: NA

Alternate protein names: P-cresol methylhydroxylase; PCMH [H]

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MNEQNHDVLPRGVSQQEFQKAIEAFQKLLGDKNVLTRPEQLIAYTKIMMPVDDAEHAPSATLVATTVKQVQEVVKICNTY
KIPIWTISTGRNFGYGSAAPHHRGQVILDLKKMNKIIHVDPELCTALVEPGVTYGQLYDYLQENNLPLMLSFSAPSAIAG
PVGNTMDRGVGYTPYGEHFMMQCGMELVLANGEVLRTGMGGVKGDNSWQVFKWGYGPTLDGMFTQANYGICTKMGFWLMP
RPPVIKPFEIRYEHESDIADIVELLRPLRITQVIPNSVVIANVLWEAGSANVRRSEYMTGRGATPDSVLKQIQHDKNLGA
WNVYAALYGTQEQVDVNWKIVTETIKKSGKGTIITQEEAGDTQPFKYRAELMSGVPNLQEFGLYNWRGGGGSMWFAPVSQ
ARGNECDKQKTLAKKILNKHGLDYVGEFIVGWRDMHHVIDVLYDRTSREETESAYRCFHELINEFEKEGYAVYRVNTAFM
ERVAQSYGPVKRRVEHAIKRALDPNNILAPGKSGIDLDTFEE

Sequences:

>Translated_522_residues
MNEQNHDVLPRGVSQQEFQKAIEAFQKLLGDKNVLTRPEQLIAYTKIMMPVDDAEHAPSATLVATTVKQVQEVVKICNTY
KIPIWTISTGRNFGYGSAAPHHRGQVILDLKKMNKIIHVDPELCTALVEPGVTYGQLYDYLQENNLPLMLSFSAPSAIAG
PVGNTMDRGVGYTPYGEHFMMQCGMELVLANGEVLRTGMGGVKGDNSWQVFKWGYGPTLDGMFTQANYGICTKMGFWLMP
RPPVIKPFEIRYEHESDIADIVELLRPLRITQVIPNSVVIANVLWEAGSANVRRSEYMTGRGATPDSVLKQIQHDKNLGA
WNVYAALYGTQEQVDVNWKIVTETIKKSGKGTIITQEEAGDTQPFKYRAELMSGVPNLQEFGLYNWRGGGGSMWFAPVSQ
ARGNECDKQKTLAKKILNKHGLDYVGEFIVGWRDMHHVIDVLYDRTSREETESAYRCFHELINEFEKEGYAVYRVNTAFM
ERVAQSYGPVKRRVEHAIKRALDPNNILAPGKSGIDLDTFEE
>Mature_522_residues
MNEQNHDVLPRGVSQQEFQKAIEAFQKLLGDKNVLTRPEQLIAYTKIMMPVDDAEHAPSATLVATTVKQVQEVVKICNTY
KIPIWTISTGRNFGYGSAAPHHRGQVILDLKKMNKIIHVDPELCTALVEPGVTYGQLYDYLQENNLPLMLSFSAPSAIAG
PVGNTMDRGVGYTPYGEHFMMQCGMELVLANGEVLRTGMGGVKGDNSWQVFKWGYGPTLDGMFTQANYGICTKMGFWLMP
RPPVIKPFEIRYEHESDIADIVELLRPLRITQVIPNSVVIANVLWEAGSANVRRSEYMTGRGATPDSVLKQIQHDKNLGA
WNVYAALYGTQEQVDVNWKIVTETIKKSGKGTIITQEEAGDTQPFKYRAELMSGVPNLQEFGLYNWRGGGGSMWFAPVSQ
ARGNECDKQKTLAKKILNKHGLDYVGEFIVGWRDMHHVIDVLYDRTSREETESAYRCFHELINEFEKEGYAVYRVNTAFM
ERVAQSYGPVKRRVEHAIKRALDPNNILAPGKSGIDLDTFEE

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016170
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: =1.17.99.1 [H]

Molecular weight: Translated: 58666; Mature: 58666

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQNHDVLPRGVSQQEFQKAIEAFQKLLGDKNVLTRPEQLIAYTKIMMPVDDAEHAPSA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCH
TLVATTVKQVQEVVKICNTYKIPIWTISTGRNFGYGSAAPHHRGQVILDLKKMNKIIHVD
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEHHHCCCEEEEC
PELCTALVEPGVTYGQLYDYLQENNLPLMLSFSAPSAIAGPVGNTMDRGVGYTPYGEHFM
HHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCHHHHH
MQCGMELVLANGEVLRTGMGGVKGDNSWQVFKWGYGPTLDGMFTQANYGICTKMGFWLMP
HHCCCCEEEECCCEEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCHHHCCCEECC
RPPVIKPFEIRYEHESDIADIVELLRPLRITQVIPNSVVIANVLWEAGSANVRRSEYMTG
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCCCCCCHHHHCCC
RGATPDSVLKQIQHDKNLGAWNVYAALYGTQEQVDVNWKIVTETIKKSGKGTIITQEEAG
CCCCHHHHHHHHHHCCCCCCEEEHHHHCCCCHHEECCCEEEEHHHHCCCCCCEEEECCCC
DTQPFKYRAELMSGVPNLQEFGLYNWRGGGGSMWFAPVSQARGNECDKQKTLAKKILNKH
CCCCHHHHHHHHHCCCCHHHCCCCEEECCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHC
GLDYVGEFIVGWRDMHHVIDVLYDRTSREETESAYRCFHELINEFEKEGYAVYRVNTAFM
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHH
ERVAQSYGPVKRRVEHAIKRALDPNNILAPGKSGIDLDTFEE
HHHHHHHCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNEQNHDVLPRGVSQQEFQKAIEAFQKLLGDKNVLTRPEQLIAYTKIMMPVDDAEHAPSA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCH
TLVATTVKQVQEVVKICNTYKIPIWTISTGRNFGYGSAAPHHRGQVILDLKKMNKIIHVD
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEHHHCCCEEEEC
PELCTALVEPGVTYGQLYDYLQENNLPLMLSFSAPSAIAGPVGNTMDRGVGYTPYGEHFM
HHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCHHHHH
MQCGMELVLANGEVLRTGMGGVKGDNSWQVFKWGYGPTLDGMFTQANYGICTKMGFWLMP
HHCCCCEEEECCCEEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCHHHCCCEECC
RPPVIKPFEIRYEHESDIADIVELLRPLRITQVIPNSVVIANVLWEAGSANVRRSEYMTG
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCCCCCCHHHHCCC
RGATPDSVLKQIQHDKNLGAWNVYAALYGTQEQVDVNWKIVTETIKKSGKGTIITQEEAG
CCCCHHHHHHHHHHCCCCCCEEEHHHHCCCCHHEECCCEEEEHHHHCCCCCCEEEECCCC
DTQPFKYRAELMSGVPNLQEFGLYNWRGGGGSMWFAPVSQARGNECDKQKTLAKKILNKH
CCCCHHHHHHHHHCCCCHHHCCCCEEECCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHC
GLDYVGEFIVGWRDMHHVIDVLYDRTSREETESAYRCFHELINEFEKEGYAVYRVNTAFM
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHH
ERVAQSYGPVKRRVEHAIKRALDPNNILAPGKSGIDLDTFEE
HHHHHHHCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7929007; 10565539; 3790500; 1846290; 10623531 [H]