Click here to switch to the map view.

The map label for this gene is ccmC [H]

Identifier: 114331627

GI number: 114331627

Start: 1725145

End: 1725888

Strand: Reverse

Name: ccmC [H]

Synonym: Neut_1641

Alternate gene names: 114331627

Gene position: 1725888-1725145 (Counterclockwise)

Preceding gene: 114331628

Following gene: 114331626

Centisome position: 64.86

GC content: 47.85

Gene sequence:

>744_bases
ATGACAATCAATTGGTTTAAATATGCCTCTCCCGCAAGTTTTTACTTTCTGGCGGGCCGGATGCTTCCCTATTTTACGGC
TTTAGCGATTACTTTACTGATCGTGGGTTTGTATATTGGTTTTTTTGTAGCTCCGACAGATTTTCAACAGGGTGAGGCCT
ACCGAATTATTTTTATCCATGTCCCGGCTGCCTGGATGTCAATGTTTCTGTATGTGGTTATGGCATTCTGGGCCGGAGTG
GGGCTGGCATTTAACACTCGACTTTCATCTATGGTGGCCAGTGCCATAGCGCCGACAGGTGCTATGTTTGCTTTCCTTGC
TCTGTGGACAGGAGCATGGTGGGGGAAACCAATGTGGGGAACATGGTGGGTCTGGGATGCTCGCCTAACATCAGAGTTAA
TACTGTTCTTTTTGTATATCGGCTTTATGTCGCTGCAGGCAGCTATTGATGATCCAAAGCGTGCGGATAAGGCTGGAGCG
GTCATTGCTCTGGTGGGCGTTGTCAATGTCCCGATTATTTATTTCTCGGTGCAGTGGTGGAATACCCTCCATCAGGGTGC
TTCCGTTAGCCTGGTTCAATCTCCCAAGATGGCAACTGCCATGTTATCCGGCATGCTGATCATGACCTTGGCAGCATGGA
TGTATTCAATTGTAATAATTCTGATCCGTACTCGTCTCATTATTCTGGAGCGTGAGCGCCACACGGCATGGGTATCGGAG
TTGAAGGAAGGAGTATTAGAATGA

Upstream 100 bases:

>100_bases
GAAAGGATGTGCCCAGAAATAATAGTGATGTTGCGTTTGTTGGTATGGTAGTAGAGCGTAATTTTATCTACTGGATCAAT
TCAGAGAGAATATTCAGAAC

Downstream 100 bases:

>100_bases
AATGGGAGAGCTTGTCTGATTTTTTTGCTATGGGCGGCTATGGCCTTTATGTATGGGGGTCTTATCTTGTTGCAATGATA
TGCGTAATTGGTGAAGTTGT

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTINWFKYASPASFYFLAGRMLPYFTALAITLLIVGLYIGFFVAPTDFQQGEAYRIIFIHVPAAWMSMFLYVVMAFWAGV
GLAFNTRLSSMVASAIAPTGAMFAFLALWTGAWWGKPMWGTWWVWDARLTSELILFFLYIGFMSLQAAIDDPKRADKAGA
VIALVGVVNVPIIYFSVQWWNTLHQGASVSLVQSPKMATAMLSGMLIMTLAAWMYSIVIILIRTRLIILERERHTAWVSE
LKEGVLE

Sequences:

>Translated_247_residues
MTINWFKYASPASFYFLAGRMLPYFTALAITLLIVGLYIGFFVAPTDFQQGEAYRIIFIHVPAAWMSMFLYVVMAFWAGV
GLAFNTRLSSMVASAIAPTGAMFAFLALWTGAWWGKPMWGTWWVWDARLTSELILFFLYIGFMSLQAAIDDPKRADKAGA
VIALVGVVNVPIIYFSVQWWNTLHQGASVSLVQSPKMATAMLSGMLIMTLAAWMYSIVIILIRTRLIILERERHTAWVSE
LKEGVLE
>Mature_246_residues
TINWFKYASPASFYFLAGRMLPYFTALAITLLIVGLYIGFFVAPTDFQQGEAYRIIFIHVPAAWMSMFLYVVMAFWAGVG
LAFNTRLSSMVASAIAPTGAMFAFLALWTGAWWGKPMWGTWWVWDARLTSELILFFLYIGFMSLQAAIDDPKRADKAGAV
IALVGVVNVPIIYFSVQWWNTLHQGASVSLVQSPKMATAMLSGMLIMTLAAWMYSIVIILIRTRLIILERERHTAWVSEL
KEGVLE

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=235, Percent_Identity=47.2340425531915, Blast_Score=209, Evalue=1e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27821; Mature: 27690

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINWFKYASPASFYFLAGRMLPYFTALAITLLIVGLYIGFFVAPTDFQQGEAYRIIFIH
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
VPAAWMSMFLYVVMAFWAGVGLAFNTRLSSMVASAIAPTGAMFAFLALWTGAWWGKPMWG
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
TWWVWDARLTSELILFFLYIGFMSLQAAIDDPKRADKAGAVIALVGVVNVPIIYFSVQWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCEEEEEEHHH
NTLHQGASVSLVQSPKMATAMLSGMLIMTLAAWMYSIVIILIRTRLIILERERHTAWVSE
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHH
LKEGVLE
HHHHCCC
>Mature Secondary Structure 
TINWFKYASPASFYFLAGRMLPYFTALAITLLIVGLYIGFFVAPTDFQQGEAYRIIFIH
CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
VPAAWMSMFLYVVMAFWAGVGLAFNTRLSSMVASAIAPTGAMFAFLALWTGAWWGKPMWG
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
TWWVWDARLTSELILFFLYIGFMSLQAAIDDPKRADKAGAVIALVGVVNVPIIYFSVQWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCEEEEEEHHH
NTLHQGASVSLVQSPKMATAMLSGMLIMTLAAWMYSIVIILIRTRLIILERERHTAWVSE
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHH
LKEGVLE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]