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The map label for this gene is rng [H]

Identifier: 114331600

GI number: 114331600

Start: 1696082

End: 1697533

Strand: Direct

Name: rng [H]

Synonym: Neut_1614

Alternate gene names: 114331600

Gene position: 1696082-1697533 (Clockwise)

Preceding gene: 114331599

Following gene: 114331601

Centisome position: 63.74

GC content: 48.0

Gene sequence:

>1452_bases
ATGAGCAGCGAGATTCTCATTAATGTCACCCCGCAAGAAACGCGTGTTGCCATCATAGAACAAGGAATCACACAGGAACT
GCACATTGAACGCACCAGCAGCCTTGGCATTGTAGGCAATATTTATAATGGACGCGTCAGCCGTGTATTGCCTGGTATGC
AGTCAGCTTTTATTGATATTGGTCTTGAACGGGCAGCCTTCCTGCATGTGGCAGATATCCATGAATCCGGCCAGACTGAG
CACAATAAGCCGATAGAGCAACTCCTGTCTGAAGGCAGCAACATCCTCGTACAGGTCGTCAAGGATGCAATTGGCGTGAA
AGGTGCCAGACTCTCCACCCAGATCAGTCTTGCGGGACGTTTGCTGGTCTATTTACCGCAAGAATCCTATATTGGTGTAT
CCCAGCGCATCGAAGATAACAATGAGCGCGAATCGTTACGCCAGAAATTACAGAGCATTCTTCCACCTGATTCTTCCGGC
GGCTACATTATCCGGACCATGGCCGAAACCGCTGATGAATCAGAGTTACAGGCTGATATCGATTATCTTCACAAACTCTG
GCAGGACATCCAGAAAAAATCATTAACCATTTCTCCGCCTTCCCTGCTTTATCAGGATCTGGATCTGAGCCATCGAGTAT
TGCGCGATTTTGTCAATGCCGACACCTACCGGGTTCGGATAGATTCACGCGAAACTCACCAAAAGCTGACCACCTTCGCC
CAGGAATACATGATGAGTGACATGGAAAAAATCAGTCACTATACTGGGGAGCGACCATTATTCGATTTATACGGTGTTGA
GCAGGAAATCGAAAAATCACTGGCCAGACGTGTCGATCTGAAATCTGGCGGATATGTAATCATCGACCAGACTGAGGCGC
TGACCACCATGGATGTCAACACCGGCGGCTTTGTCGGGGTACGAAATTTTGATGACACCATATTCAAAACTAACCTTGAA
GCTGCTCAGGTGATTGCACGACAACTACGACTACGTAATCTGGGCGGTATCATCATCATCGATTTTATCGATATGGATCG
CGAAGAACACCGGGCTGCAGTTCTGGCTGAGTTTAATAAAACCTTGCAAAAGGATCGGACTAAAATGACTGTCAACGACT
TCACCGCGCTGGGGCTGATCGAGATGACCCGTAAACGCACACGTGAAAGCCTGGCGCAAATCCTTTGCGAAACCTGCCCG
ACTTGCCAGGGACGCGGAGAAATCCGGACAGCACAAACGATCTGCTATGAAATTCTGCGTGAATTGTTACGGGAATCTCG
GCAGTTCAACGCCAAAGAATATCGTATTCTGGCCTCACAACAAGTAATTGATCTCTTTCTGGATGAAGAATCCCAGAGCC
TCGCCCAACTGGGTGATTTCATTGCCAAACCCATAGGCCTGCAGGTAGGTACAACCTATACGCAAGAACAATATGACGTC
ATCCTCATTTAA

Upstream 100 bases:

>100_bases
GTGTAGTTGGATTGCCACTATTTGAAACCTCCCAGCTACTGGAAGAAACAGGAATCCCCATTTTCTGAACAAGAATAAAT
ATAATCGGATCCCAGTTTAT

Downstream 100 bases:

>100_bases
CCTTTCTCCTGCGACAATATGTCGCATTGCAACCCGCACTAGGCTGGTCTAAAATTTTCAGACAAAGCGATGAGGAGATT
GATAATCGTTATCAATTCTG

Product: ribonuclease, Rne/Rng family protein

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSSEILINVTPQETRVAIIEQGITQELHIERTSSLGIVGNIYNGRVSRVLPGMQSAFIDIGLERAAFLHVADIHESGQTE
HNKPIEQLLSEGSNILVQVVKDAIGVKGARLSTQISLAGRLLVYLPQESYIGVSQRIEDNNERESLRQKLQSILPPDSSG
GYIIRTMAETADESELQADIDYLHKLWQDIQKKSLTISPPSLLYQDLDLSHRVLRDFVNADTYRVRIDSRETHQKLTTFA
QEYMMSDMEKISHYTGERPLFDLYGVEQEIEKSLARRVDLKSGGYVIIDQTEALTTMDVNTGGFVGVRNFDDTIFKTNLE
AAQVIARQLRLRNLGGIIIIDFIDMDREEHRAAVLAEFNKTLQKDRTKMTVNDFTALGLIEMTRKRTRESLAQILCETCP
TCQGRGEIRTAQTICYEILRELLRESRQFNAKEYRILASQQVIDLFLDEESQSLAQLGDFIAKPIGLQVGTTYTQEQYDV
ILI

Sequences:

>Translated_483_residues
MSSEILINVTPQETRVAIIEQGITQELHIERTSSLGIVGNIYNGRVSRVLPGMQSAFIDIGLERAAFLHVADIHESGQTE
HNKPIEQLLSEGSNILVQVVKDAIGVKGARLSTQISLAGRLLVYLPQESYIGVSQRIEDNNERESLRQKLQSILPPDSSG
GYIIRTMAETADESELQADIDYLHKLWQDIQKKSLTISPPSLLYQDLDLSHRVLRDFVNADTYRVRIDSRETHQKLTTFA
QEYMMSDMEKISHYTGERPLFDLYGVEQEIEKSLARRVDLKSGGYVIIDQTEALTTMDVNTGGFVGVRNFDDTIFKTNLE
AAQVIARQLRLRNLGGIIIIDFIDMDREEHRAAVLAEFNKTLQKDRTKMTVNDFTALGLIEMTRKRTRESLAQILCETCP
TCQGRGEIRTAQTICYEILRELLRESRQFNAKEYRILASQQVIDLFLDEESQSLAQLGDFIAKPIGLQVGTTYTQEQYDV
ILI
>Mature_482_residues
SSEILINVTPQETRVAIIEQGITQELHIERTSSLGIVGNIYNGRVSRVLPGMQSAFIDIGLERAAFLHVADIHESGQTEH
NKPIEQLLSEGSNILVQVVKDAIGVKGARLSTQISLAGRLLVYLPQESYIGVSQRIEDNNERESLRQKLQSILPPDSSGG
YIIRTMAETADESELQADIDYLHKLWQDIQKKSLTISPPSLLYQDLDLSHRVLRDFVNADTYRVRIDSRETHQKLTTFAQ
EYMMSDMEKISHYTGERPLFDLYGVEQEIEKSLARRVDLKSGGYVIIDQTEALTTMDVNTGGFVGVRNFDDTIFKTNLEA
AQVIARQLRLRNLGGIIIIDFIDMDREEHRAAVLAEFNKTLQKDRTKMTVNDFTALGLIEMTRKRTRESLAQILCETCPT
CQGRGEIRTAQTICYEILRELLRESRQFNAKEYRILASQQVIDLFLDEESQSLAQLGDFIAKPIGLQVGTTYTQEQYDVI
LI

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=491, Percent_Identity=52.5458248472505, Blast_Score=512, Evalue=1e-146,
Organism=Escherichia coli, GI1787325, Length=462, Percent_Identity=35.4978354978355, Blast_Score=270, Evalue=1e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 54733; Mature: 54602

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEILINVTPQETRVAIIEQGITQELHIERTSSLGIVGNIYNGRVSRVLPGMQSAFIDI
CCCCEEEEECCCHHHHHHHHHCCCHHHEEEECCCCCEEEECCCCHHHHHCCCHHHHHHHH
GLERAAFLHVADIHESGQTEHNKPIEQLLSEGSNILVQVVKDAIGVKGARLSTQISLAGR
CHHHHHHEEEEHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEHHEECCE
LLVYLPQESYIGVSQRIEDNNERESLRQKLQSILPPDSSGGYIIRTMAETADESELQADI
EEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCHHHHHHHH
DYLHKLWQDIQKKSLTISPPSLLYQDLDLSHRVLRDFVNADTYRVRIDSRETHQKLTTFA
HHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
QEYMMSDMEKISHYTGERPLFDLYGVEQEIEKSLARRVDLKSGGYVIIDQTEALTTMDVN
HHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECC
TGGFVGVRNFDDTIFKTNLEAAQVIARQLRLRNLGGIIIIDFIDMDREEHRAAVLAEFNK
CCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH
TLQKDRTKMTVNDFTALGLIEMTRKRTRESLAQILCETCPTCQGRGEIRTAQTICYEILR
HHHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
ELLRESRQFNAKEYRILASQQVIDLFLDEESQSLAQLGDFIAKPIGLQVGTTYTQEQYDV
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCE
ILI
EEC
>Mature Secondary Structure 
SSEILINVTPQETRVAIIEQGITQELHIERTSSLGIVGNIYNGRVSRVLPGMQSAFIDI
CCCEEEEECCCHHHHHHHHHCCCHHHEEEECCCCCEEEECCCCHHHHHCCCHHHHHHHH
GLERAAFLHVADIHESGQTEHNKPIEQLLSEGSNILVQVVKDAIGVKGARLSTQISLAGR
CHHHHHHEEEEHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEHHEECCE
LLVYLPQESYIGVSQRIEDNNERESLRQKLQSILPPDSSGGYIIRTMAETADESELQADI
EEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCHHHHHHHH
DYLHKLWQDIQKKSLTISPPSLLYQDLDLSHRVLRDFVNADTYRVRIDSRETHQKLTTFA
HHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
QEYMMSDMEKISHYTGERPLFDLYGVEQEIEKSLARRVDLKSGGYVIIDQTEALTTMDVN
HHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECC
TGGFVGVRNFDDTIFKTNLEAAQVIARQLRLRNLGGIIIIDFIDMDREEHRAAVLAEFNK
CCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH
TLQKDRTKMTVNDFTALGLIEMTRKRTRESLAQILCETCPTCQGRGEIRTAQTICYEILR
HHHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
ELLRESRQFNAKEYRILASQQVIDLFLDEESQSLAQLGDFIAKPIGLQVGTTYTQEQYDV
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCE
ILI
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]