| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114331473
Identifier: 114331473
GI number: 114331473
Start: 1559565
End: 1560542
Strand: Direct
Name: 114331473
Synonym: Neut_1485
Alternate gene names: NA
Gene position: 1559565-1560542 (Clockwise)
Preceding gene: 114331472
Following gene: 114331474
Centisome position: 58.61
GC content: 37.93
Gene sequence:
>978_bases ATGAGAATAAAAATGATGATTACAAAGGAAGTTTTAGATAAATATGAGGGAGATGTAGTTCTATATTACGGTGGAATCAA CAGAGAGGGATACAAGAAAATATCTAATGTCTTAGAAAGTATTCCGCATGAGAAAATAAAAATTTGTCTAGTACTTGTAA CTTATGGTGGAGATCCTGATGCCGCCTATCGAATTGCACGAGCTTTAAATCATCATTTTGAAAAAGTTGAAATCCTGATA CCGGATGCTTGCAAGTCTGCAGGAACACTTGTATGTATTGGGGCTCACAAATTAATTTTTGGAGATAGAGGTGAACTAGG GCCGTTAGATATACAATTATCAAAGCCGGATGAAATATTTGAAAATATGTCTGGCCTAAATATTATCCAAGCTATTAACG CACTAGAAAATCAGATACTTGTCTCATTTAGGAACTATCTGATGGATATACGCGGGGGTAGTGGACTGACAACAAAACTT GCAGCTGATATCGCCACAAAACTTGCAGATGGGTTTATTGCACCTATTGCCGCAAAAATAGATCCGGTAACTCTTGGTGA GCACCAAAGAGCCGTTCAAATAGCTTTTGATTATGGGCGGCGGTTAAATAAAGTAACTAATTCACTAGCGTCAGATTCAT TAATTCGATTGGTTAGTGGCTACCCATCACATGGATTTGTGATTGATAGAAAGGAAGCCTCCACCCTCTTCAAAAGTGTT GAAAAGCCAGACGCCACAACAATAGAGTTATATAAATGGGCGCTTGGATTATTGCCAAACGTTCCATATTCAGAAAACCC AATAGTTTGCAATTTTCTAGAAATCCTGGAAAAGGAAGCTGAACCGATAGCAGAGGGAGCCAATGAGACTGAAACAATTA ATGAGTCAGGAATCAAAACAGGAAGTGAAGGAATTGATGAATCTTCAAAATATGAAGGCAAGAGCGACAAGCAAAATGAT TCATGCTCAAGTCAATAA
Upstream 100 bases:
>100_bases TGGAAGAGTGAGCAATTTTAAGGAGACTTAGGCCGTAGTGGTTCTGGAAAGCTAAACTCGACTCTGGGGATGCCGTATTT ATCCTTTGTAAATATCTTGT
Downstream 100 bases:
>100_bases AGATCTATTCAAGTCTATAAAATTGAATCAATCTCGGTATGTATCACATATAACAGATCCAAGACACTCTCAAGACAATG AGGGAGCTGGTAATAGCTCA
Product: SppA protein
Products: NA
Alternate protein names: Periplasmic Serine Proteases
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MRIKMMITKEVLDKYEGDVVLYYGGINREGYKKISNVLESIPHEKIKICLVLVTYGGDPDAAYRIARALNHHFEKVEILI PDACKSAGTLVCIGAHKLIFGDRGELGPLDIQLSKPDEIFENMSGLNIIQAINALENQILVSFRNYLMDIRGGSGLTTKL AADIATKLADGFIAPIAAKIDPVTLGEHQRAVQIAFDYGRRLNKVTNSLASDSLIRLVSGYPSHGFVIDRKEASTLFKSV EKPDATTIELYKWALGLLPNVPYSENPIVCNFLEILEKEAEPIAEGANETETINESGIKTGSEGIDESSKYEGKSDKQND SCSSQ
Sequences:
>Translated_325_residues MRIKMMITKEVLDKYEGDVVLYYGGINREGYKKISNVLESIPHEKIKICLVLVTYGGDPDAAYRIARALNHHFEKVEILI PDACKSAGTLVCIGAHKLIFGDRGELGPLDIQLSKPDEIFENMSGLNIIQAINALENQILVSFRNYLMDIRGGSGLTTKL AADIATKLADGFIAPIAAKIDPVTLGEHQRAVQIAFDYGRRLNKVTNSLASDSLIRLVSGYPSHGFVIDRKEASTLFKSV EKPDATTIELYKWALGLLPNVPYSENPIVCNFLEILEKEAEPIAEGANETETINESGIKTGSEGIDESSKYEGKSDKQND SCSSQ >Mature_325_residues MRIKMMITKEVLDKYEGDVVLYYGGINREGYKKISNVLESIPHEKIKICLVLVTYGGDPDAAYRIARALNHHFEKVEILI PDACKSAGTLVCIGAHKLIFGDRGELGPLDIQLSKPDEIFENMSGLNIIQAINALENQILVSFRNYLMDIRGGSGLTTKL AADIATKLADGFIAPIAAKIDPVTLGEHQRAVQIAFDYGRRLNKVTNSLASDSLIRLVSGYPSHGFVIDRKEASTLFKSV EKPDATTIELYKWALGLLPNVPYSENPIVCNFLEILEKEAEPIAEGANETETINESGIKTGSEGIDESSKYEGKSDKQND SCSSQ
Specific function: Unknown
COG id: COG0616
COG function: function code OU; Periplasmic serine proteases (ClpP class)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35696; Mature: 35696
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKMMITKEVLDKYEGDVVLYYGGINREGYKKISNVLESIPHEKIKICLVLVTYGGDPD CEEEEEEHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHH AAYRIARALNHHFEKVEILIPDACKSAGTLVCIGAHKLIFGDRGELGPLDIQLSKPDEIF HHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECEEEEECCCCCCCCEEEEECCHHHHH ENMSGLNIIQAINALENQILVSFRNYLMDIRGGSGLTTKLAADIATKLADGFIAPIAAKI HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCC DPVTLGEHQRAVQIAFDYGRRLNKVTNSLASDSLIRLVSGYPSHGFVIDRKEASTLFKSV CCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHH EKPDATTIELYKWALGLLPNVPYSENPIVCNFLEILEKEAEPIAEGANETETINESGIKT CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHCHHHHCCCCCCHHCCCCCCCC GSEGIDESSKYEGKSDKQNDSCSSQ CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRIKMMITKEVLDKYEGDVVLYYGGINREGYKKISNVLESIPHEKIKICLVLVTYGGDPD CEEEEEEHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHH AAYRIARALNHHFEKVEILIPDACKSAGTLVCIGAHKLIFGDRGELGPLDIQLSKPDEIF HHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECEEEEECCCCCCCCEEEEECCHHHHH ENMSGLNIIQAINALENQILVSFRNYLMDIRGGSGLTTKLAADIATKLADGFIAPIAAKI HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCC DPVTLGEHQRAVQIAFDYGRRLNKVTNSLASDSLIRLVSGYPSHGFVIDRKEASTLFKSV CCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHH EKPDATTIELYKWALGLLPNVPYSENPIVCNFLEILEKEAEPIAEGANETETINESGIKT CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHCHHHHCCCCCCHHCCCCCCCC GSEGIDESSKYEGKSDKQNDSCSSQ CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA