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The map label for this gene is 114331272

Identifier: 114331272

GI number: 114331272

Start: 1339024

End: 1339986

Strand: Reverse

Name: 114331272

Synonym: Neut_1278

Alternate gene names: NA

Gene position: 1339986-1339024 (Counterclockwise)

Preceding gene: 114331275

Following gene: 114331271

Centisome position: 50.36

GC content: 48.6

Gene sequence:

>963_bases
ATGGGACAGATATTACACGGAAGCGCCCGCACGACAGCGGCGGTACGTCGAGCGATACAAAATAGTCAAGAGAGTCTGAA
TGTTCTGGCCAAGCGGCATGGGATTAATCCAAAAACGGTAGCGAAGTGGCGGAAGCGGGAATTCACCCACGATGCACCGA
TGGGCCCCAAAGAGTCGCACTCGACTGTTTTAAGTCTGGAAGAAGAAGCCGCTGTTGTGGCGTTTCGCAAACATACGCTT
CTACCGCTGGATGATTGTCTATATGCCTTGCAACCAAGCATTCCGCATTTAACCCGCTCAAGCCTGCATCGCTGCTTTCA
ACGGCATGGCATCAGTCGGTTGCCGGAGGTTGATGGTGACAAGCCAAAGAAAAAGTTTAATGCCTATCCAATTGGCTACT
TCCATATTGATATTGCCGAAGTTCGTACGAAGGAAGGTAAACTCCATCTTTTTGTAGCCATTGACCGGACATCAAAGTTC
GTTTTTGTTCAACTCCAGAACAAAGCCAACCGCAACACGGCAACCGCCTTCTTGAAGGCCGTGATCGAGACTGTTCCCTA
CAAGATCCATACAATCCTGACTGATAACGGTATCCAGTTTACGTTCCCGGCGCGTTATCGGAATGGGCCAACGGCTCAGT
ATGTAACGCATATGTTCGATAGGTGTTGTCAGATCAACGGCATCGAGCACCGTCTCACCAAACCCAACCATCCCTGGACC
AATGGTCAGGTTGAACGCATGAATCGAACCATCAAGGATGCGACTGTAAAACGGTATTATTACGACTCACACGATCAGCT
GAAGGCCCATCTCCATCGCTTTGTGATGGCTTATAACTTCGCCAAAAGACTAAAAGCTCTCAAAGGCCTAACACCCTATG
AATACATCTGCAAAATCTGGAAAAATGAGCCAGATCGTTTTATCTTTGACCCATTCCAGCACACCGTGGGACTAAACAGC
TAG

Upstream 100 bases:

>100_bases
TAAATAAAGTATCCCAATATCTGCTTTGATAAGACGGAGCTAGTTGTTTAGTCCCACGGTGTGCTGGTGTAACATATAAC
CAGCTACGGAGGGATGATTT

Downstream 100 bases:

>100_bases
TGCCTGTACAGCACCAGATAAATAGCATCAAACACAGTTATTTATCAGCTCCGATCAAGTCGGTAATCGAAAAAGTTTCA
TCTGGTACAAAGACGGCATG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Transcriptional Regulator; Integrase; Integrase Catalytic Domain-Containing Protein; Integrase Protein; Integrase Catalytic Core; Fis Family Transcriptional Regulator; Transposase And Inactivated Derivatives; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Transposase For ISMyma; Hypothethical Protein Transposase; Instegrase; Insertion Sequence Transposase Protein; Noncomposite Transposon Transposase; Transposase Of

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MGQILHGSARTTAAVRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTL
LPLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEVDGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLHLFVAIDRTSKF
VFVQLQNKANRNTATAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWT
NGQVERMNRTIKDATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNS

Sequences:

>Translated_320_residues
MGQILHGSARTTAAVRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTL
LPLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEVDGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLHLFVAIDRTSKF
VFVQLQNKANRNTATAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWT
NGQVERMNRTIKDATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNS
>Mature_319_residues
GQILHGSARTTAAVRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTLL
PLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEVDGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLHLFVAIDRTSKFV
FVQLQNKANRNTATAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWTN
GQVERMNRTIKDATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36988; Mature: 36857

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQILHGSARTTAAVRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESH
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
STVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEVDGD
CEEEEEHHHHHHEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
KPKKKFNAYPIGYFHIDIAEVRTKEGKLHLFVAIDRTSKFVFVQLQNKANRNTATAFLKA
CCHHHCCCCCEEEEEEEHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHH
VIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWT
HHHHCCEEEEEEEECCCEEEEECHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
NGQVERMNRTIKDATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIW
CCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KNEPDRFIFDPFQHTVGLNS
CCCCCCEEECCHHHHCCCCC
>Mature Secondary Structure 
GQILHGSARTTAAVRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESH
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
STVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEVDGD
CEEEEEHHHHHHEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
KPKKKFNAYPIGYFHIDIAEVRTKEGKLHLFVAIDRTSKFVFVQLQNKANRNTATAFLKA
CCHHHCCCCCEEEEEEEHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHH
VIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWT
HHHHCCEEEEEEEECCCEEEEECHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
NGQVERMNRTIKDATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIW
CCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KNEPDRFIFDPFQHTVGLNS
CCCCCCEEECCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA