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The map label for this gene is 114331267

Identifier: 114331267

GI number: 114331267

Start: 1335245

End: 1335676

Strand: Reverse

Name: 114331267

Synonym: Neut_1272

Alternate gene names: NA

Gene position: 1335676-1335245 (Counterclockwise)

Preceding gene: 114331268

Following gene: 114331263

Centisome position: 50.19

GC content: 46.99

Gene sequence:

>432_bases
ATGACTTCAAACGACTGGTTTTATTGGGCATTGTTATCCGCTATTTTTGCGGCATTAACCGCTATCTTTGTTAAGGTAGG
TGTTCAGGATGTGGATGCTGATTTGGCCACCTTAATCCGGACAGCTATCATCATCGTCGTTCTATCTGTGTTTGTGATCT
CCACTGGTAAATGGGCCAACCCCTTCAAGCTATTACCCAAGACATGGCTATTTCTTGGTCTATCTGGTTTGGCCACAGGG
GCTTCCTGGGTGTGCTACTTCCGAGCCCTTAAAATCGGTGATGTTTCCAAGGTTGCCCCCGTGGATAAATTCAGTCTTGT
CTTGGCGGCTGTATTTGCTTTCACTTTTCTGGAAGAGCGTCCATCATCTCAGGAATGGTTTGGAATCACGATGATTGCAG
GCGGTGTGCTTCTCCTTGCACTCAAGCGGTAA

Upstream 100 bases:

>100_bases
AACGTCTGTTCCAGCGGCTGCGCGATGAAAAGATCAGTGTGTTCTATATCAAGACACCGATTGAATTTGGGATGACCGAC
GATCCACAGGGAGATTGAAG

Downstream 100 bases:

>100_bases
TACATACAGACAAAAATCGTCGAATACCCAGAAATCACCAATGGGCGCCTCGAAAAAGCTTGACTCGCCCCTCCTGGTAG
ACTTGGTAAAATTACGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTSNDWFYWALLSAIFAALTAIFVKVGVQDVDADLATLIRTAIIIVVLSVFVISTGKWANPFKLLPKTWLFLGLSGLATG
ASWVCYFRALKIGDVSKVAPVDKFSLVLAAVFAFTFLEERPSSQEWFGITMIAGGVLLLALKR

Sequences:

>Translated_143_residues
MTSNDWFYWALLSAIFAALTAIFVKVGVQDVDADLATLIRTAIIIVVLSVFVISTGKWANPFKLLPKTWLFLGLSGLATG
ASWVCYFRALKIGDVSKVAPVDKFSLVLAAVFAFTFLEERPSSQEWFGITMIAGGVLLLALKR
>Mature_142_residues
TSNDWFYWALLSAIFAALTAIFVKVGVQDVDADLATLIRTAIIIVVLSVFVISTGKWANPFKLLPKTWLFLGLSGLATGA
SWVCYFRALKIGDVSKVAPVDKFSLVLAAVFAFTFLEERPSSQEWFGITMIAGGVLLLALKR

Specific function: Unknown

COG id: COG2510

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 15650; Mature: 15519

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNDWFYWALLSAIFAALTAIFVKVGVQDVDADLATLIRTAIIIVVLSVFVISTGKWAN
CCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PFKLLPKTWLFLGLSGLATGASWVCYFRALKIGDVSKVAPVDKFSLVLAAVFAFTFLEER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHCC
PSSQEWFGITMIAGGVLLLALKR
CCCCCHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
TSNDWFYWALLSAIFAALTAIFVKVGVQDVDADLATLIRTAIIIVVLSVFVISTGKWAN
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PFKLLPKTWLFLGLSGLATGASWVCYFRALKIGDVSKVAPVDKFSLVLAAVFAFTFLEER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHCC
PSSQEWFGITMIAGGVLLLALKR
CCCCCHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]