| Definition | Shewanella sp. MR-7 chromosome, complete genome. |
|---|---|
| Accession | NC_008322 |
| Length | 4,792,610 |
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Identifier: 114047531
GI number:
Start: 2400313
End: 2403480
Strand: Reverse
Name: Not Available
Synonym: Shewmr7_2036
Alternate gene names: NA
Gene position: NA
Preceding gene: 114047532
Following gene: 114047530
Centisome position: NA
GC content: NA
Gene sequence:
>3168_bases ATGGCGCAGTTTTTTATTAATCGGCCGATTTTTGCTAGCGTCATCTCCATCGTTATCGTGCTGCTCGGGGTGATTGCGAT GTTTAAGCTGCCCGTCGATCAGTATCCTTACATCACGCCGCCACAGGTGACCATTTCGGCCTCTTATCCGGGCGCCAGTT CTACTACGGCCGCCGAGTCAGTTGCAACACCGCTCGAGCAAGAAGTGAACGGTGTGCCCAATATGATTTATATGAGTTCA AAGAGTACGAACTCGGGCAGCACCAGTGTGACCATTACCTTCGATGTGGGTACTAATGCGGACTTGGCGGCGGTAGATGT GCAAAACTCCGCTCAACAAGCTTCGGGTGGACTGCCAATCGACGTGCAAACCGAAGGGGTGACTGTCTCTAAAGATGCGT CGGTGGAATTACTAAAACTGGCGTTAACCTCGGACGATGAAAGGTTCGATGAAATTTACCTGAGTAATTACGCCACCATC AATATCGAATCGGCGCTCAGGCGGATCCCCGGTGTGGGCCGCACCCGTAACACGGGTTCACGCAGTTATGCGATGCGGAT TTGGTTAAAACCCGATGCCATGGCGGGGTACAGCTTAACCACCACAGATGTGATCAACGCCATCAAGGCACAAAATAAAG AATCCCCTGCAGGCACCATTGGTACTCAACCCAATAATGACGATATAAGTTTAACCTTGCCCATCAGTGTGGCGGGCAGA TTAAGCTCGGTGCAGGCATTTAATGAGATCATAGTGCGCGCCAATCCCGACGGCTCGATTATACGGCTGCGGGATATTGC CGGCGTAGAACTCGGCTCCTCTGCCTATACGTTGCAATCCCAGTTAAATGGTGAAAATGCCACCATCTTGCAGGTGTACT TACTCCCTGGCGCCAATGCTCTTGAGGTCACCCATAAGGTGAAACAGGCGATGGCGGAACTGTCGCAAAAGTTTCCCCAA GGGATGAAATGGGAAGTATTTTATGACGCATCCATCTTTATTCAGGAATCCATCGATGAGGTGATCCACACCCTCATCGA GGCCTTGGTGCTTGTGGTGTTGGTGGTGTATTTGTTCCTGCAAAATGTGCGCGCGACTTTGATCCCCGCCATTGCGGTAC CAGTCTCCTTGATAGGCACCTTGGCGGCCATGCTGGCCTTTGGTTTTACCATTAATACTGTGAGTTTACTCGCGCTGGTT CTCGCCATTGGGATTGTGGTCGACGATGCCATTGTGGTGGTCGAAAACGTCGAGCGTTTAATTCACGAGAAAGGCATGAG CGCCATCGATGCGACTCGGATTGCGATGAAAGAATTGTCGGGTGCACTGGTTGCCACCAGTTTAGTGCTCTGCGCGGTAT TCGTCCCCGTGTCATTCTTAGCGGGGATCACAGGCATCATGTACCGCGAGTTTGCGGTGGCAATTACGGTTGCCGTGTTG ATTTCTACTCTAGTGGCGTTGACCCTAAGTCCCGCACTCTGCGCCTTACTATTAAAACCGAGTAAGGCACCACAGCGGGG ATTCTTTCACTGGCTGAATCGCAAACTCGACTTGGGGACCAATCAATATGTTGGCTTAGTCGCCTTAACCAATAAATACG CCAAACGCAGTTACTTAGCTTTTGCAATTATGTTTGGTGGTACCTATTTCATCATGTCCCACTTACCGAGCAGCTTTATG CCCGACGAGGACCAAGGTCGATTCTTTATCGATATGACATTACCCGATGGCTCTACGGTTAATCGTACCGAGGCGATTTT AAAGAAAGCCGAGCAATATGTGCGCGCCAATCCCGCTGTTGCCTATTCATTTACGCTGGCGGGGGAAAACCGCCGCTCAG GGTCGAATCAGGCCAATGGTCAATTTGAAGTGGTACTCAAGCCTTGGGCCGAGCGCGAGGCAACCCATGCCACAGTACAA TCAGTCATGAAGGCAATAGATAAGGATTTGAAAAACGTACTTGAGGCCGAGTTTAATCTTTATCTGCCATCGGCGGTGCC GGGCCTAGGCAATGGCTCAGGGGTGGAAATGCAGCTTCAAGATACCTCTGGTACACGTTTCCAAGGTTTGGTCGAAACCG CTAACGAATTAGTCGAGCAGCTAAAGCTGCAGCCTGAAGTTGCCAGTGCCAGCGTGTCGCTGCAGAGCGCAATCCCGCAA TTGCATTTGACGGTCGATGAGGCAAAGGCGATGGCGATTGGGGTGAATGTGAGTGATATTTACAGCACAATTAAAACCTT AACCGACTCATCAACCGTGAATGACTTTAACCTCTTTGGCCGGGTGTATCGGGTGAAGATCCAAGCGGAAGAGAGTTACC GTCAATTCCCGCATCAAATCAAAGATTATTATGTGCGTTCATCGAGCGGCGCTATGGTGCCGATTGGTGTGCTGGCTAAA TATGATTACACGGTGGGGCCGTCTTCAGTGACCCATTACAATTTATTCTCCAGCGCCTCCATCAATGTGACGCCCGCAAC GGGCTACGCCACTGGCGATGTTATTCAAGCCATCGAGCGGGTTGCAACGCCGATCCTGCCCGATGAGTTTAAATACGAAT GGACTGGCATCACCTACCAAGAAGTCCAGTCTGCGAATCAAACTGGCATTGCCATTGGATTAGCGCTGTTATTTGTGTTT CTGTTTTTAGCTGCGCTCTATGAGAGTTGGAGTATTCCTGTTGCCGTATTACTCATCGCGCCTATCGCACTCTTAGGCGC GGCGGTCACGACCTTAATCAGTGGCATGCAGAGTAACTTATTCTTCCAAGTGGCGTTTATTGCGTTAATCGGCATGGCGG CGAAGAATGCGATTTTGATTGTCGAGTTTGCCAATCAGTTGCACCAACAGGGCAAGACGCACATTTCTGCGGCGCTCGAA GCTGCGACCATGCGCTTTCGGCCGATTTTAATGACTTCCATGGCCTTCATTTTGGGCGTATTACCGCTAGTGTTATCCGA GGGGCCTGGGGCGGTGAGTCGACAATCAATTTCGTTACCCATTCTGGGTGGTATGGTGTTGGCAACCACCATAGGTATTG TATTTGTACCGCTGTTCTTTGTGACGACAGCGGGCTGGGTAAAAAAGAATGTCGTTAAACAACCCATTAAAACAAAAGAG GAATTACTCCTAGACCAAGAAACTGTCGAGGAGGTGAACCGTGGTTAA
Upstream 100 bases:
>100_bases CATTAAGTGCGAAGGAATACGCCGAGAAGGAAGACGAAATGTCAAAAGCCGAGGCACTTAAGCGCCAAGCCTTGGAGCAG CAAAAGCAGGAGCAAAAATA
Downstream 100 bases:
>100_bases TTGCCATCCAAAATTTGCCAAGCAATCGATGGATGCGGCGCCTACGATGTCACCCATATCAATGGGATCTCGTTTGTGCT TTAAACCGTTGTGTTTGTGC
Product: hydrophobe/amphiphile efflux-1 (HAE1) family protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1055_residues MAQFFINRPIFASVISIVIVLLGVIAMFKLPVDQYPYITPPQVTISASYPGASSTTAAESVATPLEQEVNGVPNMIYMSS KSTNSGSTSVTITFDVGTNADLAAVDVQNSAQQASGGLPIDVQTEGVTVSKDASVELLKLALTSDDERFDEIYLSNYATI NIESALRRIPGVGRTRNTGSRSYAMRIWLKPDAMAGYSLTTTDVINAIKAQNKESPAGTIGTQPNNDDISLTLPISVAGR LSSVQAFNEIIVRANPDGSIIRLRDIAGVELGSSAYTLQSQLNGENATILQVYLLPGANALEVTHKVKQAMAELSQKFPQ GMKWEVFYDASIFIQESIDEVIHTLIEALVLVVLVVYLFLQNVRATLIPAIAVPVSLIGTLAAMLAFGFTINTVSLLALV LAIGIVVDDAIVVVENVERLIHEKGMSAIDATRIAMKELSGALVATSLVLCAVFVPVSFLAGITGIMYREFAVAITVAVL ISTLVALTLSPALCALLLKPSKAPQRGFFHWLNRKLDLGTNQYVGLVALTNKYAKRSYLAFAIMFGGTYFIMSHLPSSFM PDEDQGRFFIDMTLPDGSTVNRTEAILKKAEQYVRANPAVAYSFTLAGENRRSGSNQANGQFEVVLKPWAEREATHATVQ SVMKAIDKDLKNVLEAEFNLYLPSAVPGLGNGSGVEMQLQDTSGTRFQGLVETANELVEQLKLQPEVASASVSLQSAIPQ LHLTVDEAKAMAIGVNVSDIYSTIKTLTDSSTVNDFNLFGRVYRVKIQAEESYRQFPHQIKDYYVRSSSGAMVPIGVLAK YDYTVGPSSVTHYNLFSSASINVTPATGYATGDVIQAIERVATPILPDEFKYEWTGITYQEVQSANQTGIAIGLALLFVF LFLAALYESWSIPVAVLLIAPIALLGAAVTTLISGMQSNLFFQVAFIALIGMAAKNAILIVEFANQLHQQGKTHISAALE AATMRFRPILMTSMAFILGVLPLVLSEGPGAVSRQSISLPILGGMVLATTIGIVFVPLFFVTTAGWVKKNVVKQPIKTKE ELLLDQETVEEVNRG
Sequences:
NA
Specific function: NA
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA