The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477566

Identifier: 113477566

GI number: 113477566

Start: 6392294

End: 6392974

Strand: Reverse

Name: 113477566

Synonym: Tery_4146

Alternate gene names: NA

Gene position: 6392974-6392294 (Counterclockwise)

Preceding gene: 113477570

Following gene: 113477552

Centisome position: 82.49

GC content: 34.8

Gene sequence:

>681_bases
ATGAACATTGGAACTATATTTGGGAAATTATCAATAGTTGCTGGAGGGTTAATTTTCACAGCTGCTACTGCTGGAAATGC
TTATGCTAGTACAATGTTTTTCACTGATGTTAATGCTTTTGATGCATTAACAGATACAACTTTAATAGAAGATTTTGAGG
CTTTCTCACTAAAAAATCGGCCTTTGTCATCCTTTGTTAGTAATGGCAATACATATATAGGCCATACTGGTGCACGATAT
CCCAATGTATGGGTTTCTTCCCCTGGATATACTAATTACGGTGTTCCTATAACTACTAGTAGTATAATTACTGCTACCGG
TGATGAAGATTTTACAGTGGAATTTGGTACACCTACGGAAGCAGTAGGATTTGATACTTATCTTAATACTTATGGTCCAG
CAACAGTCAATGTTTTTGGTGCTAATAATCTCCTTGATACTTTTGTGCTAAATCAAGACCCAACAACTGTAAGATTTTTA
GGAATACTTGCTAGTGAAGAAATTAGTTCTATTCGCTGGACTACTGTAGATGGAGGGAAAATTAATACAGGAATTGATAA
TATTATCCAAGGCTCAAAGATTGATAATAAATCAACACCAGAACCATCATTACTTATAGGAATAGTAAGCACCTTTGTTA
TTGCTCTTTTATCCCGAAAGAGACAAGTCATAGTAAAATGA

Upstream 100 bases:

>100_bases
AATATGATTATTTCTCATAGAATCAGGGTAGTAAACTTATGAAGCTAAGTCATACCAAACTTCTACTTCATAATACTACA
ATCTACAAGGAATAAATAAT

Downstream 100 bases:

>100_bases
CGTCAGGCAGAGGAAAAAACTTCTGTCTTCCTGGCACTAAAATCTAATTATTTAACCAGACATAATATAACTTGGGCAGA
GTTACCTCTAAATCAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MNIGTIFGKLSIVAGGLIFTAATAGNAYASTMFFTDVNAFDALTDTTLIEDFEAFSLKNRPLSSFVSNGNTYIGHTGARY
PNVWVSSPGYTNYGVPITTSSIITATGDEDFTVEFGTPTEAVGFDTYLNTYGPATVNVFGANNLLDTFVLNQDPTTVRFL
GILASEEISSIRWTTVDGGKINTGIDNIIQGSKIDNKSTPEPSLLIGIVSTFVIALLSRKRQVIVK

Sequences:

>Translated_226_residues
MNIGTIFGKLSIVAGGLIFTAATAGNAYASTMFFTDVNAFDALTDTTLIEDFEAFSLKNRPLSSFVSNGNTYIGHTGARY
PNVWVSSPGYTNYGVPITTSSIITATGDEDFTVEFGTPTEAVGFDTYLNTYGPATVNVFGANNLLDTFVLNQDPTTVRFL
GILASEEISSIRWTTVDGGKINTGIDNIIQGSKIDNKSTPEPSLLIGIVSTFVIALLSRKRQVIVK
>Mature_226_residues
MNIGTIFGKLSIVAGGLIFTAATAGNAYASTMFFTDVNAFDALTDTTLIEDFEAFSLKNRPLSSFVSNGNTYIGHTGARY
PNVWVSSPGYTNYGVPITTSSIITATGDEDFTVEFGTPTEAVGFDTYLNTYGPATVNVFGANNLLDTFVLNQDPTTVRFL
GILASEEISSIRWTTVDGGKINTGIDNIIQGSKIDNKSTPEPSLLIGIVSTFVIALLSRKRQVIVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24179; Mature: 24179

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIGTIFGKLSIVAGGLIFTAATAGNAYASTMFFTDVNAFDALTDTTLIEDFEAFSLKNR
CCCHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCC
PLSSFVSNGNTYIGHTGARYPNVWVSSPGYTNYGVPITTSSIITATGDEDFTVEFGTPTE
CHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCCCEEECCEEEEECCCCCEEEEECCCCC
AVGFDTYLNTYGPATVNVFGANNLLDTFVLNQDPTTVRFLGILASEEISSIRWTTVDGGK
CCCCHHHHHCCCCEEEEEEECCCCEEHEEECCCCCEEEEEEEHHHCCCCCEEEEEECCCE
INTGIDNIIQGSKIDNKSTPEPSLLIGIVSTFVIALLSRKRQVIVK
ECCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MNIGTIFGKLSIVAGGLIFTAATAGNAYASTMFFTDVNAFDALTDTTLIEDFEAFSLKNR
CCCHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCC
PLSSFVSNGNTYIGHTGARYPNVWVSSPGYTNYGVPITTSSIITATGDEDFTVEFGTPTE
CHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCCCEEECCEEEEECCCCCEEEEECCCCC
AVGFDTYLNTYGPATVNVFGANNLLDTFVLNQDPTTVRFLGILASEEISSIRWTTVDGGK
CCCCHHHHHCCCCEEEEEEECCCCEEHEEECCCCCEEEEEEEHHHCCCCCEEEEEECCCE
INTGIDNIIQGSKIDNKSTPEPSLLIGIVSTFVIALLSRKRQVIVK
ECCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA