The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477471

Identifier: 113477471

GI number: 113477471

Start: 6251930

End: 6252505

Strand: Reverse

Name: 113477471

Synonym: Tery_4045

Alternate gene names: NA

Gene position: 6252505-6251930 (Counterclockwise)

Preceding gene: 113477472

Following gene: 113477470

Centisome position: 80.68

GC content: 40.28

Gene sequence:

>576_bases
ATGCGTCTTCCAAAACAGACAATTTTGACAAGTGGTTGCTTGTCAGTATTAATTACATTAGGAGCAGTTTATCCTGCGAT
CGCGGCTCCTGAACTTGAGTTAGTTGCTCAACGTGAAAGATCTCGCCCTAGGGGAGGAAACCAAATTGAGGTTGTGGGCT
ATGTTAAAGGTATCGTTGGTAATGTAGTCACAATTCTTATAGATGAAGAAGAAGAATTAGGCATTCCTGGAATTGCAGGA
AATAATGGTGAACCAACTTATGTCACAATTCCTGAAGAAGAACGTGGTCAACTACGAAGTCTATATTTTTCCCCTAAGCA
CAATATAGAGATAGCAGGTCTAGTACCTGGAATGCGGGTTTATGCAGTTGTTGGTAAAAAAGATGATAACCCAGAAAACC
CTTGTGGTTGTATTGATTTTTTTAAAGTTATCCCAGATTATAATTACGAAAGGATAAAAGTTAATGTACCACGATATGAC
TTTCAAGGTCCACCATCTTTAGAGTTTCCACCGCTTCAACCACCACCTCCTATTACACGACCTATTCCTCCAGCTCCTGT
AAGAGGGCTGTGGTAA

Upstream 100 bases:

>100_bases
ACTACTGTCCAGCTATACCTGTTTTGAAAACTTTGCCCTAAATGGCAAGATTTGATAGAAAAACAGACTTAAGGCCAGGG
TAAAATTTTGTGAGGTAGTC

Downstream 100 bases:

>100_bases
TTGTCAGTAAAAACTCTATAGTAGTTTTATAATGCCACTAATAGAATAGTGGCATTATTTATATTAGAGTTATTGGGAAT
TAAGCAATAAAAAAAGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MRLPKQTILTSGCLSVLITLGAVYPAIAAPELELVAQRERSRPRGGNQIEVVGYVKGIVGNVVTILIDEEEELGIPGIAG
NNGEPTYVTIPEEERGQLRSLYFSPKHNIEIAGLVPGMRVYAVVGKKDDNPENPCGCIDFFKVIPDYNYERIKVNVPRYD
FQGPPSLEFPPLQPPPPITRPIPPAPVRGLW

Sequences:

>Translated_191_residues
MRLPKQTILTSGCLSVLITLGAVYPAIAAPELELVAQRERSRPRGGNQIEVVGYVKGIVGNVVTILIDEEEELGIPGIAG
NNGEPTYVTIPEEERGQLRSLYFSPKHNIEIAGLVPGMRVYAVVGKKDDNPENPCGCIDFFKVIPDYNYERIKVNVPRYD
FQGPPSLEFPPLQPPPPITRPIPPAPVRGLW
>Mature_191_residues
MRLPKQTILTSGCLSVLITLGAVYPAIAAPELELVAQRERSRPRGGNQIEVVGYVKGIVGNVVTILIDEEEELGIPGIAG
NNGEPTYVTIPEEERGQLRSLYFSPKHNIEIAGLVPGMRVYAVVGKKDDNPENPCGCIDFFKVIPDYNYERIKVNVPRYD
FQGPPSLEFPPLQPPPPITRPIPPAPVRGLW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21009; Mature: 21009

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPKQTILTSGCLSVLITLGAVYPAIAAPELELVAQRERSRPRGGNQIEVVGYVKGIVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHC
NVVTILIDEEEELGIPGIAGNNGEPTYVTIPEEERGQLRSLYFSPKHNIEIAGLVPGMRV
CEEEEEEECHHHCCCCCCCCCCCCCCEEECCCHHCCCEEEEEECCCCCEEEEEECCCEEE
YAVVGKKDDNPENPCGCIDFFKVIPDYNYERIKVNVPRYDFQGPPSLEFPPLQPPPPITR
EEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PIPPAPVRGLW
CCCCCCCCCCC
>Mature Secondary Structure
MRLPKQTILTSGCLSVLITLGAVYPAIAAPELELVAQRERSRPRGGNQIEVVGYVKGIVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHC
NVVTILIDEEEELGIPGIAGNNGEPTYVTIPEEERGQLRSLYFSPKHNIEIAGLVPGMRV
CEEEEEEECHHHCCCCCCCCCCCCCCEEECCCHHCCCEEEEEECCCCCEEEEEECCCEEE
YAVVGKKDDNPENPCGCIDFFKVIPDYNYERIKVNVPRYDFQGPPSLEFPPLQPPPPITR
EEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PIPPAPVRGLW
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA