Click here to switch to the map view.

The map label for this gene is 113477402

Identifier: 113477402

GI number: 113477402

Start: 6131500

End: 6132777

Strand: Reverse

Name: 113477402

Synonym: Tery_3965

Alternate gene names: NA

Gene position: 6132777-6131500 (Counterclockwise)

Preceding gene: 113477403

Following gene: 113477401

Centisome position: 79.13

GC content: 34.43

Gene sequence:

>1278_bases
ATGGAACAGGAAATATATAGTCAGGCTGTAGCAAAATCTTGTGCTGGAGACTATGAAGGAGCAATTCAAGATTTGAGTCG
AGTTATAGAAATTAATCCTAGTTTTGCTGAAGCTTATTATCGCAGAGGTTTGGCAGAGTTTGATTTAGGAAATTGGGAAG
AAGCTATTGCAGATTATACTGAGGCTTTGGCAATTAATTCTAATTATATTAATGCTTATTTTGGTCGTGGTATTGCTAGG
TTAATAGTAGGAAATATTGCTGGGACTATTATGGATGCTCATCAGATAATTGGGATTGATGATAAGTATGCTCCGGCATA
TAAGTTATTGGGTAATGCTTATGATAAACAAGGTAATCAAGCAGATGCAATTGCTAGTTTGAAACGGGGTGCAGAGTTGT
ATTTAGAACAGAAGGATGCTGTGAATTGTCGGCAATGTTTGGATAGTATTAAAAAGTTACAAAATTTTGTTCCTGCTTCT
GTAAAAAATGATGGTAATTTTCAGTGGAAAAAAGGTGATAGTAAGACTTTTTTAAATGAAATTTTGAGCAGGTTTGAAAA
AGGGAATGTCCAGGGGGTAATGGCGGATTTAAACTGGGCATTAAAAGTTGATAAATATGATTATGAAGCTTATTGTTTTC
GAGGTATTATTCGTTATAAACAAGGGGATGATTTTGGGGCAATGTCAGATTTTAATGAGGCTTTGCAACTTAATAATCAA
AGTGTTTTAGCTTATCAATATCGGGGTATTGTTCGTGGTCAAATAGGTGATTTTAAAGGAGCGATCGCTGATTGTAATGC
GGCTTTAAATATTGAACCAAATAATTCAGTTATTTATGTGAATAGAGGGAATGTTTATCGGGATATTGGTGCTTACCAAG
AGGCAATTAAAGATTATGATCAAGCATTACAAATTAATTCTAATGAAGCTAAGGCTTTTTATAACCGGGGTATTGTTTAT
TCTTGTTTAGAAGATATCAAAAAAGCTATAGATAACTATCAGAATGCTGCTCAATTATTTGGGGATGCTGAAGACTGGAA
TAATTATCAAAAAACTTTGGATAATTTGAAGAAAATTCAGACATCTGTTCCTATTCAAAGTCAGAATATTAATGAGGATA
CTAAGTATGAGCAATTGGAACAAAAGTTGTTAAGAATGGTTGGCGGGCATTGGGAAATCGCAGAAAGGTTGATTGCAAAA
GTTGAGGAAAAATATCCGGGTAGAGCTCGGATTTGGTATTTGGAAAAGGTTATATCTGATTGGCGGCAAAAGAGCTGA

Upstream 100 bases:

>100_bases
GAATAAGGGAAGGTTGTTTGGCAAATAGCAGATAGCTGCCATACAATGGGATAGTGAAATTAGTTAAACTTTTATTTAAA
TTTACCTTTAATAGAAAAAA

Downstream 100 bases:

>100_bases
ACTTGACTGTTTTTGATTTATATATTTGATAACAAGTTTGCTGTAGTTTTATAAAATTTAGTTGTGATTTTATTCGGGCT
AAATATTTTTTTTCCTACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MEQEIYSQAVAKSCAGDYEGAIQDLSRVIEINPSFAEAYYRRGLAEFDLGNWEEAIADYTEALAINSNYINAYFGRGIAR
LIVGNIAGTIMDAHQIIGIDDKYAPAYKLLGNAYDKQGNQADAIASLKRGAELYLEQKDAVNCRQCLDSIKKLQNFVPAS
VKNDGNFQWKKGDSKTFLNEILSRFEKGNVQGVMADLNWALKVDKYDYEAYCFRGIIRYKQGDDFGAMSDFNEALQLNNQ
SVLAYQYRGIVRGQIGDFKGAIADCNAALNIEPNNSVIYVNRGNVYRDIGAYQEAIKDYDQALQINSNEAKAFYNRGIVY
SCLEDIKKAIDNYQNAAQLFGDAEDWNNYQKTLDNLKKIQTSVPIQSQNINEDTKYEQLEQKLLRMVGGHWEIAERLIAK
VEEKYPGRARIWYLEKVISDWRQKS

Sequences:

>Translated_425_residues
MEQEIYSQAVAKSCAGDYEGAIQDLSRVIEINPSFAEAYYRRGLAEFDLGNWEEAIADYTEALAINSNYINAYFGRGIAR
LIVGNIAGTIMDAHQIIGIDDKYAPAYKLLGNAYDKQGNQADAIASLKRGAELYLEQKDAVNCRQCLDSIKKLQNFVPAS
VKNDGNFQWKKGDSKTFLNEILSRFEKGNVQGVMADLNWALKVDKYDYEAYCFRGIIRYKQGDDFGAMSDFNEALQLNNQ
SVLAYQYRGIVRGQIGDFKGAIADCNAALNIEPNNSVIYVNRGNVYRDIGAYQEAIKDYDQALQINSNEAKAFYNRGIVY
SCLEDIKKAIDNYQNAAQLFGDAEDWNNYQKTLDNLKKIQTSVPIQSQNINEDTKYEQLEQKLLRMVGGHWEIAERLIAK
VEEKYPGRARIWYLEKVISDWRQKS
>Mature_425_residues
MEQEIYSQAVAKSCAGDYEGAIQDLSRVIEINPSFAEAYYRRGLAEFDLGNWEEAIADYTEALAINSNYINAYFGRGIAR
LIVGNIAGTIMDAHQIIGIDDKYAPAYKLLGNAYDKQGNQADAIASLKRGAELYLEQKDAVNCRQCLDSIKKLQNFVPAS
VKNDGNFQWKKGDSKTFLNEILSRFEKGNVQGVMADLNWALKVDKYDYEAYCFRGIIRYKQGDDFGAMSDFNEALQLNNQ
SVLAYQYRGIVRGQIGDFKGAIADCNAALNIEPNNSVIYVNRGNVYRDIGAYQEAIKDYDQALQINSNEAKAFYNRGIVY
SCLEDIKKAIDNYQNAAQLFGDAEDWNNYQKTLDNLKKIQTSVPIQSQNINEDTKYEQLEQKLLRMVGGHWEIAERLIAK
VEEKYPGRARIWYLEKVISDWRQKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=365, Percent_Identity=24.9315068493151, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI32307150, Length=365, Percent_Identity=24.9315068493151, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI310110582, Length=336, Percent_Identity=23.5119047619048, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI310131789, Length=336, Percent_Identity=23.5119047619048, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI310123097, Length=336, Percent_Identity=23.5119047619048, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 48263; Mature: 48263

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQEIYSQAVAKSCAGDYEGAIQDLSRVIEINPSFAEAYYRRGLAEFDLGNWEEAIADYT
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH
EALAINSNYINAYFGRGIARLIVGNIAGTIMDAHQIIGIDDKYAPAYKLLGNAYDKQGNQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCH
ADAIASLKRGAELYLEQKDAVNCRQCLDSIKKLQNFVPASVKNDGNFQWKKGDSKTFLNE
HHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHH
ILSRFEKGNVQGVMADLNWALKVDKYDYEAYCFRGIIRYKQGDDFGAMSDFNEALQLNNQ
HHHHHHCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
SVLAYQYRGIVRGQIGDFKGAIADCNAALNIEPNNSVIYVNRGNVYRDIGAYQEAIKDYD
CEEEEECCCHHCCCCCCCCCHHHCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHH
QALQINSNEAKAFYNRGIVYSCLEDIKKAIDNYQNAAQLFGDAEDWNNYQKTLDNLKKIQ
HHEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
TSVPIQSQNINEDTKYEQLEQKLLRMVGGHWEIAERLIAKVEEKYPGRARIWYLEKVISD
HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
WRQKS
HHCCC
>Mature Secondary Structure
MEQEIYSQAVAKSCAGDYEGAIQDLSRVIEINPSFAEAYYRRGLAEFDLGNWEEAIADYT
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH
EALAINSNYINAYFGRGIARLIVGNIAGTIMDAHQIIGIDDKYAPAYKLLGNAYDKQGNQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCH
ADAIASLKRGAELYLEQKDAVNCRQCLDSIKKLQNFVPASVKNDGNFQWKKGDSKTFLNE
HHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHH
ILSRFEKGNVQGVMADLNWALKVDKYDYEAYCFRGIIRYKQGDDFGAMSDFNEALQLNNQ
HHHHHHCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
SVLAYQYRGIVRGQIGDFKGAIADCNAALNIEPNNSVIYVNRGNVYRDIGAYQEAIKDYD
CEEEEECCCHHCCCCCCCCCHHHCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHH
QALQINSNEAKAFYNRGIVYSCLEDIKKAIDNYQNAAQLFGDAEDWNNYQKTLDNLKKIQ
HHEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
TSVPIQSQNINEDTKYEQLEQKLLRMVGGHWEIAERLIAKVEEKYPGRARIWYLEKVISD
HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
WRQKS
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 9697413 [H]