| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is mtnP [H]
Identifier: 113477159
GI number: 113477159
Start: 5659327
End: 5660199
Strand: Reverse
Name: mtnP [H]
Synonym: Tery_3686
Alternate gene names: 113477159
Gene position: 5660199-5659327 (Counterclockwise)
Preceding gene: 113477160
Following gene: 113477158
Centisome position: 73.03
GC content: 36.66
Gene sequence:
>873_bases ATGAGCAAAGCAAAGATTGGCATTATTGGCGGTAGTGGTCTGTACAAAATGGAAGCACTCAAAGATGTAGAAGAAATCAA ACTAGATACACCTTTTGGCTCTCCCTCTGATGCTTTTATTGTTGGTACTCTAGAAGGAATACAAGTAGCATTTCTACCCA GACACAATCGCAACCATACTTTATTACCATCTGAATTACCGTTTCGTGCTAATATCTATGGTATGAAAAGTTTAGGTGTA AAATATTTAATCTCTGCTTCTGCAGTTGGTTCTCTCAAAGAAGAAGTCAAGCCACTAGACCTATTAGTAGTAGACCAGTT CATTGACAGGACAAAAGATCGCATATCTACTTTTTTCGGTGAAGGAATAGTAGCACACATTACTTTTGAAAATCCTACTT GTCCTGAACTAGCAAAGATACTAGCGGATGCTGCGGAAAGTTTAAAGTTAGAAAATGTAAATGTGCATCGTAGTGGCACT TATTTATGTATGGAAGGGCCTGCTTTTTCTACTAAAGCGGAGTCAAATTTATATCGCAGTTGGGGTGCAACAGTCATTGG GATGACAAACTTGCCAGAGGCAAAATTAGCAAGGGAAGCCGAAATAGCTTATGCAACATTAGCTTTGTCTACAGATTATG ATTGTTGGCATGAAGAACATGATAGCGTGACTGTAGAAATGGTAGTTAATAATTTAAATAAGAATGTGGCGAATGCTCAA AAAGTTATTCAGGAAACTGTGCGCATATTGAGTAAAAATCAGTTTGTTTCTGATTCTCATTCAGCTTTAAAAGATGCTAT TTTCACTCCTTTAGATAAAGCACCTACTGCAACTAAGAAAAAGTTGGAATTATTACTGCAGAAATATATTTAA
Upstream 100 bases:
>100_bases TTTTTTGATTTGTTTTTAACAATTAAAATCACTCCAAAGTAATTTGGCTTCAAATAATACAAGCCTATATCTGGTAAAAT ATTAGAGTAATAGAAATATA
Downstream 100 bases:
>100_bases TTTTGAAGGGAGGAGCCAGGACTCAGAACTATTTTGATAAATTTACATTGACTTGTAATAGTGCTCTAGTAAATCAAACC TTGATTTCCTAGAGAGTCCT
Product: 5'-methylthioadenosine phosphorylase
Products: NA
Alternate protein names: 5'-methylthioadenosine phosphorylase; MTA phosphorylase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSKAKIGIIGGSGLYKMEALKDVEEIKLDTPFGSPSDAFIVGTLEGIQVAFLPRHNRNHTLLPSELPFRANIYGMKSLGV KYLISASAVGSLKEEVKPLDLLVVDQFIDRTKDRISTFFGEGIVAHITFENPTCPELAKILADAAESLKLENVNVHRSGT YLCMEGPAFSTKAESNLYRSWGATVIGMTNLPEAKLAREAEIAYATLALSTDYDCWHEEHDSVTVEMVVNNLNKNVANAQ KVIQETVRILSKNQFVSDSHSALKDAIFTPLDKAPTATKKKLELLLQKYI
Sequences:
>Translated_290_residues MSKAKIGIIGGSGLYKMEALKDVEEIKLDTPFGSPSDAFIVGTLEGIQVAFLPRHNRNHTLLPSELPFRANIYGMKSLGV KYLISASAVGSLKEEVKPLDLLVVDQFIDRTKDRISTFFGEGIVAHITFENPTCPELAKILADAAESLKLENVNVHRSGT YLCMEGPAFSTKAESNLYRSWGATVIGMTNLPEAKLAREAEIAYATLALSTDYDCWHEEHDSVTVEMVVNNLNKNVANAQ KVIQETVRILSKNQFVSDSHSALKDAIFTPLDKAPTATKKKLELLLQKYI >Mature_289_residues SKAKIGIIGGSGLYKMEALKDVEEIKLDTPFGSPSDAFIVGTLEGIQVAFLPRHNRNHTLLPSELPFRANIYGMKSLGVK YLISASAVGSLKEEVKPLDLLVVDQFIDRTKDRISTFFGEGIVAHITFENPTCPELAKILADAAESLKLENVNVHRSGTY LCMEGPAFSTKAESNLYRSWGATVIGMTNLPEAKLAREAEIAYATLALSTDYDCWHEEHDSVTVEMVVNNLNKNVANAQK VIQETVRILSKNQFVSDSHSALKDAIFTPLDKAPTATKKKLELLLQKYI
Specific function: Catalyzes the formation of methylthio-D-ribose 1- phosphate (MTR-1-P) from methylthioadenosine (MTA) [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI47132622, Length=273, Percent_Identity=41.025641025641, Blast_Score=231, Evalue=7e-61, Organism=Caenorhabditis elegans, GI71980569, Length=254, Percent_Identity=44.4881889763779, Blast_Score=206, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6323045, Length=302, Percent_Identity=38.0794701986755, Blast_Score=197, Evalue=1e-51, Organism=Drosophila melanogaster, GI20130079, Length=259, Percent_Identity=38.996138996139, Blast_Score=203, Evalue=1e-52, Organism=Drosophila melanogaster, GI221459247, Length=260, Percent_Identity=37.3076923076923, Blast_Score=178, Evalue=4e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010044 - InterPro: IPR000845 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.28 [H]
Molecular weight: Translated: 31943; Mature: 31812
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAKIGIIGGSGLYKMEALKDVEEIKLDTPFGSPSDAFIVGTLEGIQVAFLPRHNRNHT CCCCEEEEEECCCCHHHHHHHHHHHEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCCC LLPSELPFRANIYGMKSLGVKYLISASAVGSLKEEVKPLDLLVVDQFIDRTKDRISTFFG CCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC EGIVAHITFENPTCPELAKILADAAESLKLENVNVHRSGTYLCMEGPAFSTKAESNLYRS CCEEEEEEECCCCCHHHHHHHHHHHHHCEECCEEEECCCCEEEEECCCCCCHHHHHHHHH WGATVIGMTNLPEAKLAREAEIAYATLALSTDYDCWHEEHDSVTVEMVVNNLNKNVANAQ CCCEEEEECCCCHHHHHHHHHHEEEEEEEECCCCHHCCCCCCEEEEHHHHHHCCHHHHHH KVIQETVRILSKNQFVSDSHSALKDAIFTPLDKAPTATKKKLELLLQKYI HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SKAKIGIIGGSGLYKMEALKDVEEIKLDTPFGSPSDAFIVGTLEGIQVAFLPRHNRNHT CCCEEEEEECCCCHHHHHHHHHHHEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCCC LLPSELPFRANIYGMKSLGVKYLISASAVGSLKEEVKPLDLLVVDQFIDRTKDRISTFFG CCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC EGIVAHITFENPTCPELAKILADAAESLKLENVNVHRSGTYLCMEGPAFSTKAESNLYRS CCEEEEEEECCCCCHHHHHHHHHHHHHCEECCEEEECCCCEEEEECCCCCCHHHHHHHHH WGATVIGMTNLPEAKLAREAEIAYATLALSTDYDCWHEEHDSVTVEMVVNNLNKNVANAQ CCCEEEEECCCCHHHHHHHHHHEEEEEEEECCCCHHCCCCCCEEEEHHHHHHCCHHHHHH KVIQETVRILSKNQFVSDSHSALKDAIFTPLDKAPTATKKKLELLLQKYI HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA